Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16155

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
3,669,191	+		PFLU_RS16145	0.57	+0.8
3,669,191	+		PFLU_RS16145	0.57	-1.2
3,669,192	-		PFLU_RS16145	0.57	+1.9
3,669,192	-		PFLU_RS16145	0.57	-0.5
3,669,192	-		PFLU_RS16145	0.57	-0.7
3,669,192	-		PFLU_RS16145	0.57	+1.3
3,669,192	-		PFLU_RS16145	0.57	-1.4
3,669,218	+		PFLU_RS16145	0.62	+0.3
3,669,219	-		PFLU_RS16145	0.62	-2.3
3,669,219	-		PFLU_RS16145	0.62	+1.1
3,669,219	-		PFLU_RS16145	0.62	-2.1
3,669,304	+		PFLU_RS16145	0.76	+0.2
3,669,304	+		PFLU_RS16145	0.76	+1.1
3,669,304	+		PFLU_RS16145	0.76	+0.2
3,669,304	+		PFLU_RS16145	0.76	-2.7
3,669,304	+		PFLU_RS16145	0.76	+0.2
3,669,304	+		PFLU_RS16145	0.76	+1.7
3,669,305	-		PFLU_RS16145	0.76	+0.9
3,669,305	-		PFLU_RS16145	0.76	+0.7
3,669,305	-		PFLU_RS16145	0.76	+0.4
3,669,305	-		PFLU_RS16145	0.76	+0.5
3,669,384	+		PFLU_RS16145	0.90	+2.2
3,669,384	+		PFLU_RS16145	0.90	+2.1
3,669,384	+		PFLU_RS16145	0.90	+1.2
3,669,385	-		PFLU_RS16145	0.90	+1.1
3,669,385	-		PFLU_RS16145	0.90	-1.3
3,669,390	+				+0.1
3,669,435	-				-0.6
3,669,435	-				-1.4
3,669,435	-				+0.9
3,669,512	+				+0.7
3,669,513	-				-0.8
3,669,513	-				-2.3
3,669,513	-				+0.4
3,669,513	-				-0.7
3,669,513	-				+1.5
3,669,559	+		PFLU_RS16150	0.16	+0.2
3,669,559	+		PFLU_RS16150	0.16	+1.7
3,669,560	-		PFLU_RS16150	0.17	-0.5
3,669,590	+		PFLU_RS16150	0.21	-1.2
3,669,590	+		PFLU_RS16150	0.21	-0.9
3,669,590	+		PFLU_RS16150	0.21	-0.7
3,669,590	+		PFLU_RS16150	0.21	+1.4
3,669,590	+		PFLU_RS16150	0.21	-1.1
3,669,590	+		PFLU_RS16150	0.21	-0.8
3,669,590	+		PFLU_RS16150	0.21	-0.5
3,669,590	+		PFLU_RS16150	0.21	-0.7
3,669,590	+		PFLU_RS16150	0.21	-3.0
3,669,590	+		PFLU_RS16150	0.21	-0.9
3,669,590	+		PFLU_RS16150	0.21	-1.5
3,669,591	-		PFLU_RS16150	0.21	-0.1
3,669,591	-		PFLU_RS16150	0.21	-0.6
3,669,591	-		PFLU_RS16150	0.21	-0.9
3,669,591	-		PFLU_RS16150	0.21	-0.5
3,669,591	-		PFLU_RS16150	0.21	+0.3
3,669,591	-		PFLU_RS16150	0.21	-0.4
3,669,591	-		PFLU_RS16150	0.21	-0.2
3,669,591	-		PFLU_RS16150	0.21	+0.5
3,669,591	-		PFLU_RS16150	0.21	-0.1
3,669,591	-		PFLU_RS16150	0.21	-0.3
3,669,591	-		PFLU_RS16150	0.21	+1.1
3,669,591	-		PFLU_RS16150	0.21	+0.1
3,669,591	-		PFLU_RS16150	0.21	-0.5
3,669,591	-		PFLU_RS16150	0.21	-0.2
3,669,591	-		PFLU_RS16150	0.21	-0.5
3,669,591	-		PFLU_RS16150	0.21	+0.6
3,669,591	-		PFLU_RS16150	0.21	-0.9
3,669,591	-		PFLU_RS16150	0.21	+0.8
3,669,594	+		PFLU_RS16150	0.21	+0.3
3,669,594	+		PFLU_RS16150	0.21	+0.7
3,669,594	+		PFLU_RS16150	0.21	-2.7
3,669,594	+		PFLU_RS16150	0.21	-2.6
3,669,595	-		PFLU_RS16150	0.22	+0.2
3,669,595	-		PFLU_RS16150	0.22	+1.7
3,669,643	-		PFLU_RS16150	0.28	-1.5
3,669,643	-		PFLU_RS16150	0.28	-0.7
3,669,676	+		PFLU_RS16150	0.33	-0.6
3,669,676	+		PFLU_RS16150	0.33	+2.7
3,669,676	+		PFLU_RS16150	0.33	-1.9
3,669,676	+		PFLU_RS16150	0.33	-0.9
3,669,676	+		PFLU_RS16150	0.33	+0.3
3,669,676	+		PFLU_RS16150	0.33	-0.5
3,669,677	-		PFLU_RS16150	0.33	+0.6
3,669,677	-		PFLU_RS16150	0.33	+1.9
3,669,677	-		PFLU_RS16150	0.33	-1.7
3,669,748	+		PFLU_RS16150	0.43	+1.2
3,669,748	+		PFLU_RS16150	0.43	+1.1
3,669,748	+		PFLU_RS16150	0.43	+0.3
3,669,749	-		PFLU_RS16150	0.44	+0.2
3,669,749	-		PFLU_RS16150	0.44	+1.1
3,669,749	-		PFLU_RS16150	0.44	+0.3
3,669,749	-		PFLU_RS16150	0.44	+0.8
3,669,796	+		PFLU_RS16150	0.50	+0.4
3,669,796	+		PFLU_RS16150	0.50	+2.4
3,669,797	-		PFLU_RS16150	0.51	+0.1
3,669,805	+		PFLU_RS16150	0.52	-1.1
3,669,805	+		PFLU_RS16150	0.52	-0.3
3,669,805	+		PFLU_RS16150	0.52	-2.7
3,669,807	+		PFLU_RS16150	0.52	-0.5
3,669,807	+		PFLU_RS16150	0.52	-1.9
3,669,808	-		PFLU_RS16150	0.52	+0.6
3,669,979	+		PFLU_RS16150	0.77	+0.1
3,669,979	+		PFLU_RS16150	0.77	-1.7
3,669,979	+		PFLU_RS16150	0.77	-1.2
3,669,979	+		PFLU_RS16150	0.77	-0.4
3,669,980	-		PFLU_RS16150	0.77	-0.5
3,669,980	-		PFLU_RS16150	0.77	-0.3
3,670,086	+				+1.3
3,670,086	+				-0.6
3,670,087	-				+0.4
3,670,196	+				-1.5
3,670,196	+				-0.9
3,670,196	+				+1.6
3,670,196	+				+1.1
3,670,197	-				-0.1
3,670,197	-				-1.5
3,670,197	-				-0.2
3,670,197	-				-0.4
3,670,262	+		PFLU_RS16155	0.11	-0.9
3,670,287	+		PFLU_RS16155	0.14	+1.7
3,670,364	+		PFLU_RS16155	0.23	-0.3
3,670,364	+		PFLU_RS16155	0.23	-0.9
3,670,364	+		PFLU_RS16155	0.23	-0.2
3,670,364	+		PFLU_RS16155	0.23	+0.9
3,670,365	-		PFLU_RS16155	0.23	-2.5
3,670,365	-		PFLU_RS16155	0.23	-0.3
3,670,608	-		PFLU_RS16155	0.53	+0.7
3,670,608	-		PFLU_RS16155	0.53	+0.3
3,670,691	+		PFLU_RS16155	0.64	-0.3
3,670,705	+		PFLU_RS16155	0.65	-3.3
3,670,705	+		PFLU_RS16155	0.65	-0.5
3,670,705	+		PFLU_RS16155	0.65	+1.1
3,670,727	+		PFLU_RS16155	0.68	-2.1
3,670,810	+		PFLU_RS16155	0.78	-0.5
3,670,811	-		PFLU_RS16155	0.78	+2.8
3,670,811	-		PFLU_RS16155	0.78	+0.1
3,670,811	-		PFLU_RS16155	0.78	-0.3
3,670,811	-		PFLU_RS16155	0.78	-1.5
3,670,811	-		PFLU_RS16155	0.78	+0.9
3,671,013	+				-1.9
3,671,013	+				-0.5
3,671,013	+				-1.5
3,671,013	+				+0.6
3,671,013	+				+0.2
3,671,013	+				-1.5
3,671,013	+				-0.8
3,671,013	+				+1.1
3,671,013	+				+0.3
3,671,013	+				+0.1
3,671,013	+				+2.1
3,671,014	-				+1.1
3,671,014	-				-0.5
3,671,014	-				+0.2
3,671,014	-				-1.6
3,671,017	-				-0.1
3,671,036	-				+0.9
3,671,047	+				-0.1
3,671,060	+				-0.7
3,671,070	-				+0.2
3,671,070	-				-0.1
3,671,136	+		PFLU_RS16160	0.14	-0.7
3,671,137	-		PFLU_RS16160	0.14	+0.1
3,671,137	-		PFLU_RS16160	0.14	-1.3
3,671,193	+		PFLU_RS16160	0.20	-0.9
3,671,193	+		PFLU_RS16160	0.20	+0.9
3,671,193	+		PFLU_RS16160	0.20	+1.4
3,671,202	+		PFLU_RS16160	0.21	+0.6
3,671,202	+		PFLU_RS16160	0.21	+0.7
3,671,203	-		PFLU_RS16160	0.21	-1.0
3,671,460	+		PFLU_RS16160	0.50	+0.3
3,671,460	+		PFLU_RS16160	0.50	-3.0
3,671,461	-		PFLU_RS16160	0.50	-1.5
3,671,461	-		PFLU_RS16160	0.50	-2.4
3,671,461	-		PFLU_RS16160	0.50	+0.4
3,671,490	+		PFLU_RS16160	0.53	+1.3
3,671,490	+		PFLU_RS16160	0.53	-0.5
3,671,566	+		PFLU_RS16160	0.62	+1.0
3,671,566	+		PFLU_RS16160	0.62	+3.1
3,671,566	+		PFLU_RS16160	0.62	-0.5
3,671,566	+		PFLU_RS16160	0.62	-0.7
3,671,567	-		PFLU_RS16160	0.62	+0.6
3,671,605	+		PFLU_RS16160	0.66	+0.1
3,671,763	+		PFLU_RS16160	0.84	+0.3
3,671,763	+		PFLU_RS16160	0.84	-1.5
3,671,763	+		PFLU_RS16160	0.84	+0.2
3,671,763	+		PFLU_RS16160	0.84	-1.5
3,671,763	+		PFLU_RS16160	0.84	-0.6
3,671,763	+		PFLU_RS16160	0.84	+0.1
3,671,763	+		PFLU_RS16160	0.84	-0.2
3,671,763	+		PFLU_RS16160	0.84	-0.2
3,671,764	-		PFLU_RS16160	0.84	+1.1
3,671,764	-		PFLU_RS16160	0.84	-0.9
3,671,764	-		PFLU_RS16160	0.84	-1.1
3,671,764	-		PFLU_RS16160	0.84	+4.1
3,671,764	-		PFLU_RS16160	0.84	+0.7
3,671,911	-				-0.5
3,671,927	+				+0.2
3,671,927	+				+0.7
3,671,928	-				+0.4
3,671,928	-				-0.2
3,671,928	-				+2.1