Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05015

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,121,115	+		PFLU_RS05010	0.65	-1.8
1,121,116	-		PFLU_RS05010	0.65	-1.8
1,121,116	-		PFLU_RS05010	0.65	+0.2
1,121,174	+		PFLU_RS05010	0.68	+0.5
1,121,174	+		PFLU_RS05010	0.68	+0.6
1,121,174	+		PFLU_RS05010	0.68	+0.7
1,121,174	+		PFLU_RS05010	0.68	+0.6
1,121,174	+		PFLU_RS05010	0.68	+0.8
1,121,175	-		PFLU_RS05010	0.68	+1.2
1,121,175	-		PFLU_RS05010	0.68	-0.6
1,121,217	+		PFLU_RS05010	0.69	+0.6
1,121,217	+		PFLU_RS05010	0.69	+0.3
1,121,217	+		PFLU_RS05010	0.69	-1.8
1,121,217	+		PFLU_RS05010	0.69	-0.4
1,121,218	-		PFLU_RS05010	0.69	-1.2
1,121,218	-		PFLU_RS05010	0.69	-0.8
1,121,218	-		PFLU_RS05010	0.69	+0.7
1,121,218	-		PFLU_RS05010	0.69	-0.4
1,121,218	-		PFLU_RS05010	0.69	-1.4
1,121,324	+		PFLU_RS05010	0.74	-0.3
1,121,324	+		PFLU_RS05010	0.74	-0.0
1,121,324	+		PFLU_RS05010	0.74	-0.5
1,121,325	-		PFLU_RS05010	0.74	-2.0
1,121,325	-		PFLU_RS05010	0.74	-1.6
1,121,409	+		PFLU_RS05010	0.77	+1.9
1,121,409	+		PFLU_RS05010	0.77	-1.0
1,121,418	+		PFLU_RS05010	0.77	-1.2
1,121,418	+		PFLU_RS05010	0.77	-0.5
1,121,418	+		PFLU_RS05010	0.77	-0.8
1,121,418	+		PFLU_RS05010	0.77	+0.1
1,121,418	+		PFLU_RS05010	0.77	-0.6
1,121,418	+		PFLU_RS05010	0.77	-2.3
1,121,419	-		PFLU_RS05010	0.78	+0.6
1,121,419	-		PFLU_RS05010	0.78	+0.2
1,121,419	-		PFLU_RS05010	0.78	-1.4
1,121,419	-		PFLU_RS05010	0.78	+0.4
1,121,419	-		PFLU_RS05010	0.78	-0.6
1,121,419	-		PFLU_RS05010	0.78	+0.9
1,121,436	+		PFLU_RS05010	0.78	-0.2
1,121,436	+		PFLU_RS05010	0.78	+0.6
1,121,436	+		PFLU_RS05010	0.78	-1.7
1,121,436	+		PFLU_RS05010	0.78	+0.7
1,121,436	+		PFLU_RS05010	0.78	-0.9
1,121,437	-		PFLU_RS05010	0.78	+1.1
1,121,437	-		PFLU_RS05010	0.78	-0.4
1,121,437	-		PFLU_RS05010	0.78	+0.1
1,121,469	+		PFLU_RS05010	0.80	+1.4
1,121,470	-		PFLU_RS05010	0.80	-1.1
1,121,514	-		PFLU_RS05010	0.81	+1.1
1,121,514	-		PFLU_RS05010	0.81	-0.5
1,121,723	+		PFLU_RS05010	0.90	-0.9
1,121,723	+		PFLU_RS05010	0.90	-0.2
1,121,723	+		PFLU_RS05010	0.90	-1.9
1,121,723	+		PFLU_RS05010	0.90	+1.0
1,121,723	+		PFLU_RS05010	0.90	+0.4
1,121,723	+		PFLU_RS05010	0.90	+0.8
1,121,723	+		PFLU_RS05010	0.90	+0.2
1,121,723	+		PFLU_RS05010	0.90	+0.2
1,121,724	-		PFLU_RS05010	0.90	-0.8
1,121,724	-		PFLU_RS05010	0.90	-1.0
1,121,724	-		PFLU_RS05010	0.90	+1.6
1,121,724	-		PFLU_RS05010	0.90	-2.5
1,121,724	-		PFLU_RS05010	0.90	+0.8
1,121,724	-		PFLU_RS05010	0.90	+0.6
1,121,724	-		PFLU_RS05010	0.90	+1.3
1,121,794	+				-1.0
1,121,794	+				-0.9
1,121,794	+				+0.8
1,121,827	+				-0.6
1,121,827	+				-1.5
1,121,827	+				+0.8
1,121,827	+				-0.2
1,121,827	+				+0.5
1,121,828	-				+0.7
1,121,828	-				-1.8
1,121,828	-				+0.4
1,122,021	-				-1.8
1,122,021	-				-1.0
1,122,021	-				+0.6
1,122,021	-				-1.2
1,122,021	-				-0.1
1,122,066	+				+1.6
1,122,066	+				+1.0
1,122,067	-				+1.2
1,122,087	+				-0.0
1,122,088	-				+0.1
1,122,110	+		PFLU_RS05015	0.10	-0.2
1,122,111	-		PFLU_RS05015	0.10	+0.0
1,122,168	+		PFLU_RS05015	0.18	+0.3
1,122,168	+		PFLU_RS05015	0.18	-2.8
1,122,168	+		PFLU_RS05015	0.18	+0.8
1,122,168	+		PFLU_RS05015	0.18	-0.1
1,122,168	+		PFLU_RS05015	0.18	+1.6
1,122,168	+		PFLU_RS05015	0.18	+0.7
1,122,168	+		PFLU_RS05015	0.18	-0.3
1,122,168	+		PFLU_RS05015	0.18	+0.8
1,122,168	+		PFLU_RS05015	0.18	+0.2
1,122,168	+		PFLU_RS05015	0.18	-0.9
1,122,168	+		PFLU_RS05015	0.18	+1.1
1,122,168	+		PFLU_RS05015	0.18	-0.2
1,122,168	+		PFLU_RS05015	0.18	-0.1
1,122,168	+		PFLU_RS05015	0.18	+1.7
1,122,168	+		PFLU_RS05015	0.18	-0.0
1,122,169	-		PFLU_RS05015	0.18	-0.0
1,122,169	-		PFLU_RS05015	0.18	-0.3
1,122,169	-		PFLU_RS05015	0.18	+1.4
1,122,169	-		PFLU_RS05015	0.18	+0.2
1,122,169	-		PFLU_RS05015	0.18	+3.1
1,122,169	-		PFLU_RS05015	0.18	+0.4
1,122,169	-		PFLU_RS05015	0.18	-1.4
1,122,169	-		PFLU_RS05015	0.18	-1.3
1,122,169	-		PFLU_RS05015	0.18	+0.2
1,122,237	+		PFLU_RS05015	0.28	+1.8
1,122,237	+		PFLU_RS05015	0.28	-0.2
1,122,237	+		PFLU_RS05015	0.28	+0.9
1,122,237	+		PFLU_RS05015	0.28	+1.0
1,122,237	+		PFLU_RS05015	0.28	-1.2
1,122,237	+		PFLU_RS05015	0.28	-0.3
1,122,237	+		PFLU_RS05015	0.28	+0.1
1,122,238	-		PFLU_RS05015	0.28	-0.9
1,122,238	-		PFLU_RS05015	0.28	-0.2
1,122,238	-		PFLU_RS05015	0.28	-0.9
1,122,238	-		PFLU_RS05015	0.28	-2.0
1,122,238	-		PFLU_RS05015	0.28	-0.4
1,122,238	-		PFLU_RS05015	0.28	+0.5
1,122,238	-		PFLU_RS05015	0.28	-0.8
1,122,238	-		PFLU_RS05015	0.28	+0.5
1,122,368	+		PFLU_RS05015	0.46	+0.8
1,122,368	+		PFLU_RS05015	0.46	-0.6
1,122,368	+		PFLU_RS05015	0.46	-1.2
1,122,368	+		PFLU_RS05015	0.46	+0.6
1,122,369	-		PFLU_RS05015	0.46	+1.5
1,122,369	-		PFLU_RS05015	0.46	+0.7
1,122,369	-		PFLU_RS05015	0.46	-0.4
1,122,369	-		PFLU_RS05015	0.46	+0.3
1,122,369	-		PFLU_RS05015	0.46	-3.3
1,122,369	-		PFLU_RS05015	0.46	-2.5
1,122,369	-		PFLU_RS05015	0.46	-0.7
1,122,369	-		PFLU_RS05015	0.46	+1.6
1,122,369	-		PFLU_RS05015	0.46	-1.2
1,122,369	-		PFLU_RS05015	0.46	+1.9
1,122,398	-		PFLU_RS05015	0.50	+0.2
1,122,398	-		PFLU_RS05015	0.50	+1.9
1,122,398	-		PFLU_RS05015	0.50	+0.8
1,122,410	+		PFLU_RS05015	0.52	-0.4
1,122,410	+		PFLU_RS05015	0.52	-1.4
1,122,410	+		PFLU_RS05015	0.52	-0.0
1,122,410	+		PFLU_RS05015	0.52	+0.5
1,122,410	+		PFLU_RS05015	0.52	-0.1
1,122,411	-		PFLU_RS05015	0.52	-2.0
1,122,411	-		PFLU_RS05015	0.52	+0.6
1,122,411	-		PFLU_RS05015	0.52	+1.1
1,122,411	-		PFLU_RS05015	0.52	+1.8
1,122,411	-		PFLU_RS05015	0.52	+1.1
1,122,473	-		PFLU_RS05015	0.60	-0.4
1,122,473	-		PFLU_RS05015	0.60	+0.1
1,122,728	+				-1.0
1,122,729	-				+0.8
1,122,742	+				-0.4
1,122,777	+				-0.4
1,122,784	+				-0.1
1,122,785	-				-1.4
1,122,785	-				-1.1
1,122,785	-				-1.0
1,122,785	-				-0.0
1,122,785	-				-0.2
1,122,794	+				+0.8
1,122,794	+				-2.4
1,122,794	+				+0.2
1,122,794	+				-1.8
1,122,795	-				+0.7
1,122,800	+				-0.9
1,122,966	-		PFLU_RS05020	0.28	-2.0
1,123,112	+		PFLU_RS05020	0.51	-1.2
1,123,113	-		PFLU_RS05020	0.51	+1.6
1,123,393	+				+0.9
1,123,413	+				+0.2
1,123,413	+				+0.3
1,123,413	+				+1.0
1,123,413	+				-1.0
1,123,413	+				+0.1
1,123,413	+				-0.4
1,123,413	+				-0.2
1,123,413	+				+2.4
1,123,413	+				+0.2
1,123,413	+				+1.6
1,123,414	-				-0.4
1,123,414	-				+1.3
1,123,414	-				+1.1
1,123,414	-				-2.0
1,123,414	-				+0.4
1,123,414	-				-2.2
1,123,430	+				-1.4
1,123,431	-				+1.1
1,123,431	-				+0.5
1,123,431	-				+1.0
1,123,465	+				+0.4
1,123,472	-				+1.4
1,123,552	+		PFLU_RS05025	0.14	-0.7
1,123,552	+		PFLU_RS05025	0.14	-2.9
1,123,552	+		PFLU_RS05025	0.14	-0.3
1,123,552	+		PFLU_RS05025	0.14	+0.4
1,123,552	+		PFLU_RS05025	0.14	-1.4
1,123,552	+		PFLU_RS05025	0.14	+1.0
1,123,552	+		PFLU_RS05025	0.14	+0.9
1,123,552	+		PFLU_RS05025	0.14	-1.9
1,123,553	-		PFLU_RS05025	0.14	+0.3
1,123,553	-		PFLU_RS05025	0.14	+1.9
1,123,553	-		PFLU_RS05025	0.14	-1.8
1,123,553	-		PFLU_RS05025	0.14	+2.1
1,123,553	-		PFLU_RS05025	0.14	-0.8
1,123,627	+		PFLU_RS05025	0.26	-0.4
1,123,627	+		PFLU_RS05025	0.26	+0.6
1,123,627	+		PFLU_RS05025	0.26	-0.6
1,123,627	+		PFLU_RS05025	0.26	-2.3
1,123,627	+		PFLU_RS05025	0.26	-2.1
1,123,627	+		PFLU_RS05025	0.26	-0.0
1,123,627	+		PFLU_RS05025	0.26	+1.9
1,123,627	+		PFLU_RS05025	0.26	+1.2
1,123,628	-		PFLU_RS05025	0.26	+0.7
1,123,628	-		PFLU_RS05025	0.26	+1.0
1,123,628	-		PFLU_RS05025	0.26	-1.8
1,123,628	-		PFLU_RS05025	0.26	-1.0
1,123,628	-		PFLU_RS05025	0.26	-1.2
1,123,628	-		PFLU_RS05025	0.26	-0.8
1,123,628	-		PFLU_RS05025	0.26	-1.2
1,123,628	-		PFLU_RS05025	0.26	+1.3
1,123,628	-		PFLU_RS05025	0.26	+0.9
1,123,687	+		PFLU_RS05025	0.36	+1.8
1,123,688	-		PFLU_RS05025	0.36	+0.4
1,123,688	-		PFLU_RS05025	0.36	+1.1
1,123,744	+		PFLU_RS05025	0.45	+0.3
1,123,744	+		PFLU_RS05025	0.45	+1.2
1,123,744	+		PFLU_RS05025	0.45	-0.4
1,123,745	-		PFLU_RS05025	0.45	+1.3
1,123,745	-		PFLU_RS05025	0.45	-1.1