Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13245

Experiment: 2-Keto-D-gluconic hemicalcium salt (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Keto-D-gluconic hemicalcium salt (C)
2,994,173	+		PFLU_RS13240	0.28	-3.5
2,994,173	+		PFLU_RS13240	0.28	-2.9
2,994,173	+		PFLU_RS13240	0.28	-2.0
2,994,179	+		PFLU_RS13240	0.29	-2.6
2,994,179	+		PFLU_RS13240	0.29	-1.7
2,994,180	-		PFLU_RS13240	0.29	-1.9
2,994,180	-		PFLU_RS13240	0.29	-2.7
2,994,180	-		PFLU_RS13240	0.29	-2.3
2,994,180	-		PFLU_RS13240	0.29	-3.5
2,994,356	-		PFLU_RS13240	0.47	+0.6
2,994,356	-		PFLU_RS13240	0.47	-3.2
2,994,637	+		PFLU_RS13240	0.76	+0.3
2,994,637	+		PFLU_RS13240	0.76	-2.0
2,994,637	+		PFLU_RS13240	0.76	-1.4
2,994,637	+		PFLU_RS13240	0.76	-0.7
2,994,637	+		PFLU_RS13240	0.76	+0.3
2,994,637	+		PFLU_RS13240	0.76	-1.5
2,994,637	+		PFLU_RS13240	0.76	-2.6
2,994,637	+		PFLU_RS13240	0.76	-0.3
2,994,638	-		PFLU_RS13240	0.76	-3.0
2,994,638	-		PFLU_RS13240	0.76	-1.7
2,994,638	-		PFLU_RS13240	0.76	-2.7
2,994,638	-		PFLU_RS13240	0.76	-1.5
2,994,638	-		PFLU_RS13240	0.76	-2.6
2,994,638	-		PFLU_RS13240	0.76	-1.7
2,994,638	-		PFLU_RS13240	0.76	-1.5
2,994,638	-		PFLU_RS13240	0.76	+1.3
2,994,714	+		PFLU_RS13240	0.83	-1.9
2,994,714	+		PFLU_RS13240	0.83	-3.0
2,994,715	-		PFLU_RS13240	0.84	-3.2
2,994,715	-		PFLU_RS13240	0.84	-1.5
2,994,742	+		PFLU_RS13240	0.86	-3.2
2,994,742	+		PFLU_RS13240	0.86	-0.5
2,994,987	+				-1.9
2,994,987	+				-2.2
2,994,987	+				-2.4
2,994,987	+				-3.2
2,994,988	-				-0.3
2,994,988	-				-1.5
2,995,015	+		PFLU_RS13245	0.11	-1.0
2,995,015	+		PFLU_RS13245	0.11	-3.0
2,995,015	+		PFLU_RS13245	0.11	-1.3
2,995,015	+		PFLU_RS13245	0.11	-2.9
2,995,016	-		PFLU_RS13245	0.11	-0.7
2,995,016	-		PFLU_RS13245	0.11	-2.3
2,995,016	-		PFLU_RS13245	0.11	-2.2
2,995,016	-		PFLU_RS13245	0.11	-2.0
2,995,035	+		PFLU_RS13245	0.13	-2.2
2,995,035	+		PFLU_RS13245	0.13	-3.0
2,995,035	+		PFLU_RS13245	0.13	-1.3
2,995,036	-		PFLU_RS13245	0.13	-2.0
2,995,036	-		PFLU_RS13245	0.13	-2.4
2,995,143	+		PFLU_RS13245	0.21	-3.2
2,995,143	+		PFLU_RS13245	0.21	-2.2
2,995,144	-		PFLU_RS13245	0.21	-1.9
2,995,152	+		PFLU_RS13245	0.22	-0.7
2,995,152	+		PFLU_RS13245	0.22	-1.0
2,995,152	+		PFLU_RS13245	0.22	-1.7
2,995,152	+		PFLU_RS13245	0.22	-2.4
2,995,152	+		PFLU_RS13245	0.22	-1.5
2,995,152	+		PFLU_RS13245	0.22	-1.3
2,995,152	+		PFLU_RS13245	0.22	-1.5
2,995,152	+		PFLU_RS13245	0.22	-1.0
2,995,152	+		PFLU_RS13245	0.22	-2.2
2,995,153	-		PFLU_RS13245	0.22	-0.2
2,995,153	-		PFLU_RS13245	0.22	-1.9
2,995,153	-		PFLU_RS13245	0.22	-2.0
2,995,153	-		PFLU_RS13245	0.22	+0.3
2,995,153	-		PFLU_RS13245	0.22	-2.0
2,995,153	-		PFLU_RS13245	0.22	-3.0
2,995,153	-		PFLU_RS13245	0.22	-2.5
2,995,153	-		PFLU_RS13245	0.22	-2.0
2,995,185	+		PFLU_RS13245	0.24	-0.3
2,995,185	+		PFLU_RS13245	0.24	-1.9
2,995,185	+		PFLU_RS13245	0.24	-1.7
2,995,185	+		PFLU_RS13245	0.24	-0.9
2,995,185	+		PFLU_RS13245	0.24	-1.9
2,995,185	+		PFLU_RS13245	0.24	-1.7
2,995,185	+		PFLU_RS13245	0.24	-0.4
2,995,185	+		PFLU_RS13245	0.24	-0.6
2,995,185	+		PFLU_RS13245	0.24	-0.7
2,995,186	-		PFLU_RS13245	0.24	-2.3
2,995,186	-		PFLU_RS13245	0.24	-1.7
2,995,186	-		PFLU_RS13245	0.24	-2.4
2,995,186	-		PFLU_RS13245	0.24	-0.7
2,995,218	+		PFLU_RS13245	0.27	-2.0
2,995,227	+		PFLU_RS13245	0.27	-1.3
2,995,227	+		PFLU_RS13245	0.27	-1.5
2,995,227	+		PFLU_RS13245	0.27	-2.8
2,995,227	+		PFLU_RS13245	0.27	-1.7
2,995,227	+		PFLU_RS13245	0.27	-0.7
2,995,227	+		PFLU_RS13245	0.27	-1.4
2,995,227	+		PFLU_RS13245	0.27	-2.8
2,995,227	+		PFLU_RS13245	0.27	-0.7
2,995,227	+		PFLU_RS13245	0.27	-1.3
2,995,228	-		PFLU_RS13245	0.28	-3.4
2,995,228	-		PFLU_RS13245	0.28	-1.3
2,995,228	-		PFLU_RS13245	0.28	-0.4
2,995,228	-		PFLU_RS13245	0.28	-2.3
2,995,228	-		PFLU_RS13245	0.28	-0.3
2,995,228	-		PFLU_RS13245	0.28	-2.0
2,995,228	-		PFLU_RS13245	0.28	-3.0
2,995,228	-		PFLU_RS13245	0.28	-2.0
2,995,228	-		PFLU_RS13245	0.28	-3.0
2,995,228	-		PFLU_RS13245	0.28	-1.4
2,995,228	-		PFLU_RS13245	0.28	-2.7
2,995,228	-		PFLU_RS13245	0.28	+1.3
2,995,228	-		PFLU_RS13245	0.28	-1.2
2,995,228	-		PFLU_RS13245	0.28	-2.3
2,995,228	-		PFLU_RS13245	0.28	-1.3
2,995,228	-		PFLU_RS13245	0.28	-1.3
2,995,335	+		PFLU_RS13245	0.36	-2.5
2,995,335	+		PFLU_RS13245	0.36	-2.4
2,995,423	-		PFLU_RS13245	0.43	-2.2
2,995,423	-		PFLU_RS13245	0.43	-1.3
2,995,423	-		PFLU_RS13245	0.43	-1.9
2,995,423	-		PFLU_RS13245	0.43	-0.7
2,995,423	-		PFLU_RS13245	0.43	-1.5
2,995,494	+		PFLU_RS13245	0.48	-0.4
2,995,494	+		PFLU_RS13245	0.48	-1.3
2,995,494	+		PFLU_RS13245	0.48	-1.9
2,995,495	-		PFLU_RS13245	0.48	-0.9
2,995,495	-		PFLU_RS13245	0.48	-0.3
2,995,495	-		PFLU_RS13245	0.48	-1.5
2,995,615	+		PFLU_RS13245	0.57	-0.9
2,995,744	+		PFLU_RS13245	0.67	-0.7
2,995,744	+		PFLU_RS13245	0.67	-0.0
2,995,744	+		PFLU_RS13245	0.67	-0.3
2,995,745	-		PFLU_RS13245	0.68	+0.3
2,995,745	-		PFLU_RS13245	0.68	+0.3
2,995,788	+		PFLU_RS13245	0.71	-0.7
2,995,788	+		PFLU_RS13245	0.71	-2.0
2,995,789	-		PFLU_RS13245	0.71	-0.7
2,995,789	-		PFLU_RS13245	0.71	+0.3
2,995,789	-		PFLU_RS13245	0.71	-2.5
2,995,789	-		PFLU_RS13245	0.71	-2.4
2,995,857	+		PFLU_RS13245	0.76	-1.9
2,995,858	-		PFLU_RS13245	0.76	-1.7
2,995,858	-		PFLU_RS13245	0.76	-0.7
2,995,858	-		PFLU_RS13245	0.76	-2.3
2,995,858	-		PFLU_RS13245	0.76	-3.2
2,995,858	-		PFLU_RS13245	0.76	-1.1
2,995,858	-		PFLU_RS13245	0.76	-1.0
2,995,858	-		PFLU_RS13245	0.76	+0.3
2,995,858	-		PFLU_RS13245	0.76	-2.4
2,995,858	-		PFLU_RS13245	0.76	-1.0
2,995,858	-		PFLU_RS13245	0.76	-0.7
2,995,951	-		PFLU_RS13245	0.83	-2.9
2,995,951	-		PFLU_RS13245	0.83	-2.6
2,995,951	-		PFLU_RS13245	0.83	-1.7
2,995,951	-		PFLU_RS13245	0.83	-0.1
2,996,070	+				-2.6
2,996,070	+				-1.5
2,996,070	+				-1.3
2,996,070	+				-2.6
2,996,071	-				-2.6
2,996,071	-				+0.3
2,996,071	-				-2.8
2,996,071	-				-3.4
2,996,071	-				-1.5
2,996,071	-				-1.7
2,996,088	+				-1.9
2,996,088	+				-0.3
2,996,100	+				-2.2
2,996,100	+				-2.3
2,996,101	-				-1.5
2,996,101	-				-0.7
2,996,101	-				-1.2
2,996,107	+				-1.2
2,996,108	-				-3.0
2,996,127	+				-1.9
2,996,127	+				-1.3
2,996,127	+				-2.0
2,996,127	+				-1.4
2,996,127	+				-2.0
2,996,127	+				-2.0
2,996,127	+				-2.5
2,996,127	+				-1.3
2,996,127	+				-1.3
2,996,127	+				-0.7
2,996,128	-				-1.2
2,996,128	-				-2.2
2,996,128	-				-2.5
2,996,128	-				-3.1
2,996,128	-				-0.3
2,996,128	-				-0.7
2,996,187	+				-3.1
2,996,187	+				-1.0
2,996,187	+				-2.6
2,996,187	+				-2.0
2,996,188	-				-1.5
2,996,188	-				-0.7
2,996,188	-				-0.8
2,996,188	-				-2.2
2,996,188	-				-2.2
2,996,211	+				-2.0
2,996,211	+				-1.9
2,996,211	+				-3.1
2,996,211	+				-2.0
2,996,211	+				-1.9
2,996,211	+				-1.0
2,996,211	+				+0.7
2,996,212	-				+0.1
2,996,212	-				-0.5
2,996,212	-				+1.8
2,996,212	-				+0.3
2,996,212	-				-2.5
2,996,212	-				+0.0
2,996,212	-				-2.4
2,996,212	-				-1.0
2,996,212	-				-1.5
2,996,212	-				+1.9
2,996,212	-				-0.5
2,996,212	-				-0.5
2,996,231	+				-0.6
2,996,309	+		PFLU_RS13250	0.11	-0.7
2,996,310	-		PFLU_RS13250	0.11	+0.1
2,996,445	+		PFLU_RS13250	0.25	-1.9
2,996,445	+		PFLU_RS13250	0.25	-0.3
2,996,448	+		PFLU_RS13250	0.25	-0.8
2,996,448	+		PFLU_RS13250	0.25	+0.3
2,996,449	-		PFLU_RS13250	0.25	-3.0
2,996,449	-		PFLU_RS13250	0.25	-1.0
2,996,449	-		PFLU_RS13250	0.25	+0.3
2,996,503	-		PFLU_RS13250	0.31	-1.3
2,996,503	-		PFLU_RS13250	0.31	-2.0
2,996,664	-		PFLU_RS13250	0.48	-2.0
2,996,664	-		PFLU_RS13250	0.48	-2.5
2,996,832	+		PFLU_RS13250	0.66	-1.7
2,996,833	-		PFLU_RS13250	0.66	-1.3
2,996,833	-		PFLU_RS13250	0.66	-3.4