Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS11775 and PFLU_RS11785 are separated by 882 nucleotides PFLU_RS11785 and PFLU_RS11790 are separated by 53 nucleotides
PFLU_RS11775: PFLU_RS11775 - alkene reductase, at 2,611,434 to 2,612,567
_RS11775
PFLU_RS11785: PFLU_RS11785 - IS3 family transposase, at 2,613,450 to 2,614,597
_RS11785
PFLU_RS11790: PFLU_RS11790 - zinc-binding dehydrogenase, at 2,614,651 to 2,615,649
_RS11790
Position (kb)
2613
2614
2615 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2612.508 kb on + strand at 2612.508 kb on + strand at 2612.509 kb on - strand at 2612.509 kb on - strand at 2612.604 kb on + strand at 2612.967 kb on - strand at 2612.967 kb on - strand at 2612.971 kb on - strand at 2612.971 kb on - strand at 2612.978 kb on - strand at 2612.978 kb on - strand at 2613.074 kb on + strand at 2613.074 kb on + strand at 2613.074 kb on + strand at 2613.074 kb on + strand at 2613.074 kb on + strand at 2613.075 kb on - strand at 2613.078 kb on + strand at 2613.078 kb on + strand at 2613.078 kb on + strand at 2613.079 kb on - strand at 2613.079 kb on - strand at 2613.079 kb on - strand at 2613.138 kb on + strand at 2613.361 kb on + strand at 2613.361 kb on + strand at 2613.361 kb on + strand at 2613.361 kb on + strand at 2613.361 kb on + strand at 2613.361 kb on + strand at 2613.361 kb on + strand at 2613.361 kb on + strand at 2613.361 kb on + strand at 2613.362 kb on - strand at 2613.362 kb on - strand at 2613.362 kb on - strand at 2613.362 kb on - strand at 2613.362 kb on - strand at 2613.362 kb on - strand at 2613.365 kb on + strand at 2613.365 kb on + strand at 2613.365 kb on + strand at 2613.365 kb on + strand at 2613.365 kb on + strand at 2613.366 kb on - strand at 2613.366 kb on - strand at 2613.366 kb on - strand at 2613.366 kb on - strand at 2613.366 kb on - strand at 2613.366 kb on - strand at 2613.366 kb on - strand at 2613.366 kb on - strand at 2613.396 kb on - strand at 2614.649 kb on + strand at 2614.649 kb on + strand at 2614.649 kb on + strand at 2614.652 kb on + strand at 2614.652 kb on + strand at 2614.652 kb on + strand at 2614.652 kb on + strand at 2614.653 kb on - strand at 2614.653 kb on - strand at 2614.653 kb on - strand at 2614.653 kb on - strand at 2614.653 kb on - strand at 2614.653 kb on - strand at 2614.653 kb on - strand at 2614.680 kb on + strand at 2614.680 kb on + strand at 2614.681 kb on - strand at 2614.681 kb on - strand at 2614.681 kb on - strand at 2614.681 kb on - strand at 2614.681 kb on - strand at 2614.733 kb on + strand at 2614.734 kb on - strand at 2614.734 kb on - strand at 2614.734 kb on - strand at 2614.734 kb on - strand at 2614.734 kb on - strand at 2614.734 kb on - strand at 2614.734 kb on - strand at 2614.788 kb on - strand, within PFLU_RS11790 at 2614.788 kb on - strand, within PFLU_RS11790 at 2615.396 kb on + strand, within PFLU_RS11790 at 2615.396 kb on + strand, within PFLU_RS11790 at 2615.480 kb on + strand, within PFLU_RS11790 at 2615.480 kb on + strand, within PFLU_RS11790 at 2615.481 kb on - strand, within PFLU_RS11790 at 2615.481 kb on - strand, within PFLU_RS11790 at 2615.481 kb on - strand, within PFLU_RS11790
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 2,612,508 + -1.1 2,612,508 + +1.1 2,612,509 - +0.8 2,612,509 - -2.1 2,612,604 + -1.1 2,612,967 - +1.7 2,612,967 - +0.9 2,612,971 - +1.4 2,612,971 - +0.8 2,612,978 - +1.9 2,612,978 - -1.3 2,613,074 + +2.4 2,613,074 + -1.8 2,613,074 + -0.1 2,613,074 + -1.7 2,613,074 + +1.1 2,613,075 - -1.3 2,613,078 + -0.7 2,613,078 + -0.2 2,613,078 + +0.4 2,613,079 - +0.8 2,613,079 - +1.3 2,613,079 - -0.1 2,613,138 + -0.5 2,613,361 + -0.5 2,613,361 + +1.0 2,613,361 + -1.3 2,613,361 + -1.7 2,613,361 + +1.2 2,613,361 + +1.2 2,613,361 + +1.1 2,613,361 + +0.5 2,613,361 + -1.8 2,613,362 - -2.1 2,613,362 - -1.9 2,613,362 - +0.9 2,613,362 - +1.1 2,613,362 - -2.7 2,613,362 - +1.3 2,613,365 + -2.2 2,613,365 + +1.6 2,613,365 + -0.1 2,613,365 + +1.2 2,613,365 + -0.8 2,613,366 - +1.4 2,613,366 - +1.2 2,613,366 - +0.4 2,613,366 - +0.0 2,613,366 - +0.9 2,613,366 - +1.1 2,613,366 - +0.2 2,613,366 - +2.6 2,613,396 - +0.1 2,614,649 + -2.1 2,614,649 + -0.8 2,614,649 + +2.5 2,614,652 + -0.1 2,614,652 + +1.5 2,614,652 + -1.1 2,614,652 + -2.5 2,614,653 - -1.3 2,614,653 - -1.5 2,614,653 - -1.4 2,614,653 - +1.8 2,614,653 - -0.1 2,614,653 - -1.4 2,614,653 - +0.4 2,614,680 + +1.9 2,614,680 + +0.2 2,614,681 - -1.5 2,614,681 - +0.9 2,614,681 - +1.1 2,614,681 - -3.0 2,614,681 - +2.1 2,614,733 + -1.9 2,614,734 - -0.6 2,614,734 - +1.0 2,614,734 - -0.8 2,614,734 - +1.6 2,614,734 - +0.3 2,614,734 - -3.1 2,614,734 - -0.1 2,614,788 - PFLU_RS11790 0.14 -0.7 2,614,788 - PFLU_RS11790 0.14 +0.8 2,615,396 + PFLU_RS11790 0.75 +1.6 2,615,396 + PFLU_RS11790 0.75 +0.9 2,615,480 + PFLU_RS11790 0.83 -1.2 2,615,480 + PFLU_RS11790 0.83 -1.6 2,615,481 - PFLU_RS11790 0.83 +2.5 2,615,481 - PFLU_RS11790 0.83 -1.1 2,615,481 - PFLU_RS11790 0.83 +1.2
Or see this region's nucleotide sequence