Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06940

Experiment: m-Inositol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m-Inositol (C)
1,553,656	+				+0.7
1,553,656	+				+2.2
1,553,656	+				-1.1
1,553,656	+				+1.4
1,553,656	+				+0.0
1,553,656	+				-2.1
1,553,657	-				-0.9
1,553,657	-				+0.3
1,553,667	-				-1.1
1,553,667	-				-2.0
1,553,673	+				+0.3
1,553,673	+				-1.7
1,553,673	+				+0.8
1,553,673	+				-0.4
1,553,673	+				+0.6
1,553,674	-				+0.1
1,553,674	-				+3.5
1,553,674	-				-2.4
1,553,674	-				-0.1
1,553,693	+				+2.5
1,553,693	+				+1.7
1,553,693	+				+0.1
1,553,694	-				-0.3
1,553,694	-				-0.8
1,553,694	-				-0.1
1,553,694	-				-0.9
1,553,694	-				-1.7
1,553,694	-				-0.6
1,553,771	+		PFLU_RS06935	0.10	-1.6
1,553,771	+		PFLU_RS06935	0.10	+1.2
1,553,771	+		PFLU_RS06935	0.10	+0.7
1,553,772	-		PFLU_RS06935	0.10	-0.9
1,553,772	-		PFLU_RS06935	0.10	-1.4
1,553,772	-		PFLU_RS06935	0.10	+1.1
1,553,772	-		PFLU_RS06935	0.10	-0.7
1,553,772	-		PFLU_RS06935	0.10	-0.3
1,553,772	-		PFLU_RS06935	0.10	+0.2
1,553,841	+		PFLU_RS06935	0.17	-0.5
1,553,842	-		PFLU_RS06935	0.18	+1.2
1,553,842	-		PFLU_RS06935	0.18	+0.1
1,553,961	+		PFLU_RS06935	0.30	-0.1
1,553,961	+		PFLU_RS06935	0.30	-0.6
1,553,962	-		PFLU_RS06935	0.30	+0.1
1,553,967	+		PFLU_RS06935	0.30	+1.8
1,553,967	+		PFLU_RS06935	0.30	+1.4
1,553,968	-		PFLU_RS06935	0.31	-1.4
1,553,968	-		PFLU_RS06935	0.31	-1.3
1,553,968	-		PFLU_RS06935	0.31	-1.4
1,553,968	-		PFLU_RS06935	0.31	-0.0
1,554,165	+		PFLU_RS06935	0.51	-1.6
1,554,165	+		PFLU_RS06935	0.51	-2.5
1,554,165	+		PFLU_RS06935	0.51	-0.4
1,554,165	+		PFLU_RS06935	0.51	-1.4
1,554,165	+		PFLU_RS06935	0.51	+1.0
1,554,165	+		PFLU_RS06935	0.51	-0.6
1,554,165	+		PFLU_RS06935	0.51	-1.3
1,554,165	+		PFLU_RS06935	0.51	+2.1
1,554,165	+		PFLU_RS06935	0.51	+0.7
1,554,166	-		PFLU_RS06935	0.51	-0.9
1,554,166	-		PFLU_RS06935	0.51	+1.1
1,554,166	-		PFLU_RS06935	0.51	+1.0
1,554,166	-		PFLU_RS06935	0.51	+0.7
1,554,166	-		PFLU_RS06935	0.51	-2.2
1,554,166	-		PFLU_RS06935	0.51	+0.2
1,554,201	+		PFLU_RS06935	0.55	+0.4
1,554,201	+		PFLU_RS06935	0.55	-2.0
1,554,243	+		PFLU_RS06935	0.59	+0.7
1,554,243	+		PFLU_RS06935	0.59	+0.8
1,554,243	+		PFLU_RS06935	0.59	+0.8
1,554,243	+		PFLU_RS06935	0.59	+0.1
1,554,243	+		PFLU_RS06935	0.59	+3.3
1,554,243	+		PFLU_RS06935	0.59	-0.0
1,554,243	+		PFLU_RS06935	0.59	-1.1
1,554,243	+		PFLU_RS06935	0.59	+1.2
1,554,243	+		PFLU_RS06935	0.59	+1.5
1,554,243	+		PFLU_RS06935	0.59	-1.6
1,554,243	+		PFLU_RS06935	0.59	-1.3
1,554,243	+		PFLU_RS06935	0.59	-0.7
1,554,243	+		PFLU_RS06935	0.59	-0.9
1,554,243	+		PFLU_RS06935	0.59	-2.1
1,554,243	+		PFLU_RS06935	0.59	+0.7
1,554,243	+		PFLU_RS06935	0.59	-1.4
1,554,243	+		PFLU_RS06935	0.59	-1.2
1,554,243	+		PFLU_RS06935	0.59	+1.8
1,554,243	+		PFLU_RS06935	0.59	-0.1
1,554,243	+		PFLU_RS06935	0.59	+0.1
1,554,243	+		PFLU_RS06935	0.59	+1.1
1,554,243	+		PFLU_RS06935	0.59	-2.4
1,554,243	+		PFLU_RS06935	0.59	-0.3
1,554,243	+		PFLU_RS06935	0.59	+0.1
1,554,243	+		PFLU_RS06935	0.59	+0.4
1,554,243	+		PFLU_RS06935	0.59	+1.2
1,554,243	+		PFLU_RS06935	0.59	-2.1
1,554,243	+		PFLU_RS06935	0.59	-0.9
1,554,243	+		PFLU_RS06935	0.59	+0.2
1,554,243	+		PFLU_RS06935	0.59	-1.3
1,554,243	+		PFLU_RS06935	0.59	+0.9
1,554,243	+		PFLU_RS06935	0.59	-1.6
1,554,243	+		PFLU_RS06935	0.59	-0.5
1,554,243	+		PFLU_RS06935	0.59	-0.5
1,554,243	+		PFLU_RS06935	0.59	-2.7
1,554,243	+		PFLU_RS06935	0.59	+2.5
1,554,244	-		PFLU_RS06935	0.59	-0.6
1,554,244	-		PFLU_RS06935	0.59	-0.1
1,554,244	-		PFLU_RS06935	0.59	+0.4
1,554,244	-		PFLU_RS06935	0.59	-0.8
1,554,244	-		PFLU_RS06935	0.59	-1.6
1,554,244	-		PFLU_RS06935	0.59	+0.1
1,554,244	-		PFLU_RS06935	0.59	+1.1
1,554,244	-		PFLU_RS06935	0.59	+0.7
1,554,244	-		PFLU_RS06935	0.59	-2.2
1,554,244	-		PFLU_RS06935	0.59	+1.0
1,554,244	-		PFLU_RS06935	0.59	+0.3
1,554,244	-		PFLU_RS06935	0.59	-1.5
1,554,244	-		PFLU_RS06935	0.59	-0.9
1,554,244	-		PFLU_RS06935	0.59	+0.3
1,554,244	-		PFLU_RS06935	0.59	+1.3
1,554,244	-		PFLU_RS06935	0.59	-0.2
1,554,244	-		PFLU_RS06935	0.59	+0.8
1,554,244	-		PFLU_RS06935	0.59	-2.0
1,554,244	-		PFLU_RS06935	0.59	-0.1
1,554,244	-		PFLU_RS06935	0.59	+1.1
1,554,244	-		PFLU_RS06935	0.59	+0.1
1,554,312	+		PFLU_RS06935	0.66	+0.4
1,554,312	+		PFLU_RS06935	0.66	+0.6
1,554,312	+		PFLU_RS06935	0.66	-0.1
1,554,312	+		PFLU_RS06935	0.66	-0.3
1,554,312	+		PFLU_RS06935	0.66	+1.3
1,554,312	+		PFLU_RS06935	0.66	+0.7
1,554,312	+		PFLU_RS06935	0.66	+2.9
1,554,312	+		PFLU_RS06935	0.66	-1.8
1,554,312	+		PFLU_RS06935	0.66	+1.6
1,554,312	+		PFLU_RS06935	0.66	-2.5
1,554,313	-		PFLU_RS06935	0.66	+0.5
1,554,313	-		PFLU_RS06935	0.66	+0.4
1,554,313	-		PFLU_RS06935	0.66	+1.1
1,554,313	-		PFLU_RS06935	0.66	-0.3
1,554,313	-		PFLU_RS06935	0.66	-2.7
1,554,480	+		PFLU_RS06935	0.83	+0.8
1,554,480	+		PFLU_RS06935	0.83	-2.3
1,554,481	-		PFLU_RS06935	0.83	-1.1
1,554,481	-		PFLU_RS06935	0.83	-0.6
1,554,786	+		PFLU_RS06940	0.28	-2.0
1,554,786	+		PFLU_RS06940	0.28	-2.1
1,554,786	+		PFLU_RS06940	0.28	-1.9
1,554,787	-		PFLU_RS06940	0.28	+0.1
1,554,787	-		PFLU_RS06940	0.28	-1.3
1,554,787	-		PFLU_RS06940	0.28	-2.8
1,555,047	+		PFLU_RS06940	0.76	-2.2
1,555,047	+		PFLU_RS06940	0.76	-0.8
1,555,048	-		PFLU_RS06940	0.76	+0.6
1,555,048	-		PFLU_RS06940	0.76	-0.1
1,555,048	-		PFLU_RS06940	0.76	+0.7
1,555,109	+		PFLU_RS06940	0.87	-1.5
1,555,110	-		PFLU_RS06940	0.88	+0.0
1,555,110	-		PFLU_RS06940	0.88	+0.5
1,555,116	+		PFLU_RS06940	0.89	-1.4
1,555,116	+		PFLU_RS06940	0.89	-0.2
1,555,116	+		PFLU_RS06940	0.89	-2.7
1,555,116	+		PFLU_RS06940	0.89	-1.9
1,555,116	+		PFLU_RS06940	0.89	-0.2
1,555,116	+		PFLU_RS06940	0.89	-0.9
1,555,116	+		PFLU_RS06940	0.89	-2.6
1,555,116	+		PFLU_RS06940	0.89	+1.1
1,555,116	+		PFLU_RS06940	0.89	-2.2
1,555,116	+		PFLU_RS06940	0.89	+0.3
1,555,117	-		PFLU_RS06940	0.89	-2.4
1,555,117	-		PFLU_RS06940	0.89	-0.5
1,555,117	-		PFLU_RS06940	0.89	-1.1
1,555,117	-		PFLU_RS06940	0.89	-0.5
1,555,122	+		PFLU_RS06940	0.90	-1.4
1,555,122	+		PFLU_RS06940	0.90	+0.4
1,555,123	-				-0.1
1,555,123	-				+0.7
1,555,123	-				-2.3
1,555,123	-				-0.2
1,555,124	+				+0.7
1,555,124	+				+1.6
1,555,125	-				+0.5
1,555,125	-				-1.4
1,555,125	-				-0.3
1,555,248	+				-0.3
1,555,248	+				-2.1
1,555,248	+				+2.2
1,555,249	-				+1.0
1,555,249	-				-1.7
1,555,252	+				+2.4
1,555,252	+				-2.2
1,555,252	+				+3.6
1,555,252	+				-1.3
1,555,252	+				+0.4
1,555,252	+				+0.6
1,555,252	+				+0.3
1,555,253	-				+1.1
1,555,253	-				+1.3
1,555,253	-				-1.7
1,555,253	-				+1.4
1,555,253	-				+0.4
1,555,253	-				-0.3
1,555,253	-				+0.1
1,555,253	-				+1.3
1,555,253	-				-2.9
1,555,253	-				+0.1
1,555,253	-				-0.7
1,555,254	+				+1.3
1,555,254	+				+0.3
1,555,254	+				-0.7
1,555,254	+				-1.3
1,555,255	-				+0.7
1,555,255	-				+2.3
1,555,255	-				-0.3
1,555,255	-				-0.3
1,555,255	-				-0.7
1,555,270	+				+1.4
1,555,485	+		PFLU_RS06945	0.18	+0.4
1,555,485	+		PFLU_RS06945	0.18	+1.9
1,555,485	+		PFLU_RS06945	0.18	-0.6
1,555,485	+		PFLU_RS06945	0.18	-0.9
1,555,485	+		PFLU_RS06945	0.18	-0.7
1,555,486	-		PFLU_RS06945	0.18	+1.0
1,555,486	-		PFLU_RS06945	0.18	-0.4
1,555,533	+		PFLU_RS06945	0.24	-1.4
1,555,533	+		PFLU_RS06945	0.24	+1.4
1,555,533	+		PFLU_RS06945	0.24	-0.9
1,555,533	+		PFLU_RS06945	0.24	-2.1
1,555,533	+		PFLU_RS06945	0.24	+2.0
1,555,533	+		PFLU_RS06945	0.24	+0.7
1,555,533	+		PFLU_RS06945	0.24	+0.5
1,555,534	-		PFLU_RS06945	0.24	-2.9
1,555,534	-		PFLU_RS06945	0.24	-1.0
1,555,534	-		PFLU_RS06945	0.24	-0.9
1,555,635	+		PFLU_RS06945	0.36	+0.1
1,555,635	+		PFLU_RS06945	0.36	-0.6
1,555,635	+		PFLU_RS06945	0.36	-1.4
1,555,635	+		PFLU_RS06945	0.36	-0.7
1,555,635	+		PFLU_RS06945	0.36	-1.7
1,555,636	-		PFLU_RS06945	0.36	+1.0
1,555,636	-		PFLU_RS06945	0.36	+1.7
1,555,636	-		PFLU_RS06945	0.36	+2.3
1,555,636	-		PFLU_RS06945	0.36	+0.5
1,555,636	-		PFLU_RS06945	0.36	+0.6
1,555,681	+		PFLU_RS06945	0.41	+2.0
1,555,785	+		PFLU_RS06945	0.53	+0.1
1,555,785	+		PFLU_RS06945	0.53	+0.9
1,555,785	+		PFLU_RS06945	0.53	-2.7
1,555,785	+		PFLU_RS06945	0.53	+1.0
1,555,785	+		PFLU_RS06945	0.53	+0.1
1,555,785	+		PFLU_RS06945	0.53	-1.1
1,555,785	+		PFLU_RS06945	0.53	+0.5
1,555,786	-		PFLU_RS06945	0.53	+1.3
1,555,786	-		PFLU_RS06945	0.53	-1.4
1,555,786	-		PFLU_RS06945	0.53	-0.6
1,555,786	-		PFLU_RS06945	0.53	-0.4
1,555,786	-		PFLU_RS06945	0.53	-1.5
1,555,786	-		PFLU_RS06945	0.53	-1.1
1,555,786	-		PFLU_RS06945	0.53	-1.6
1,555,786	-		PFLU_RS06945	0.53	+1.9
1,555,786	-		PFLU_RS06945	0.53	+2.2
1,555,786	-		PFLU_RS06945	0.53	+0.3
1,555,786	-		PFLU_RS06945	0.53	+0.9
1,555,786	-		PFLU_RS06945	0.53	-0.6
1,555,786	-		PFLU_RS06945	0.53	-1.1
1,555,827	+		PFLU_RS06945	0.58	+0.6
1,555,828	-		PFLU_RS06945	0.58	+0.1
1,555,863	+		PFLU_RS06945	0.62	+1.6
1,555,864	-		PFLU_RS06945	0.62	+0.8
1,555,864	-		PFLU_RS06945	0.62	+0.5
1,555,998	+		PFLU_RS06945	0.77	-0.9
1,555,998	+		PFLU_RS06945	0.77	-0.6
1,556,034	+		PFLU_RS06945	0.81	-0.9
1,556,034	+		PFLU_RS06945	0.81	-2.8
1,556,034	+		PFLU_RS06945	0.81	+0.6
1,556,034	+		PFLU_RS06945	0.81	+0.4
1,556,035	-		PFLU_RS06945	0.81	+0.8
1,556,035	-		PFLU_RS06945	0.81	-0.6
1,556,035	-		PFLU_RS06945	0.81	-0.5
1,556,035	-		PFLU_RS06945	0.81	+0.6
1,556,075	+		PFLU_RS06945	0.86	-1.3
1,556,076	-		PFLU_RS06945	0.86	+0.7
1,556,076	-		PFLU_RS06945	0.86	+1.6
1,556,076	-		PFLU_RS06945	0.86	+2.2