Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11095

Experiment: m-Inositol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m-Inositol (C)
2,446,282	+		PFLU_RS11085	0.88	-0.2
2,446,283	-		PFLU_RS11085	0.89	-0.7
2,446,308	-				+0.0
2,446,308	-				-1.8
2,446,308	-				-0.9
2,446,315	+				-0.2
2,446,316	-				-1.2
2,446,316	-				-0.2
2,446,316	-				+0.2
2,446,316	-				+2.5
2,446,326	-				-1.1
2,446,334	+				-2.5
2,446,356	-				-1.2
2,446,508	+		PFLU_RS11090	0.21	+4.6
2,446,649	+		PFLU_RS11090	0.40	+1.7
2,446,649	+		PFLU_RS11090	0.40	+0.4
2,446,649	+		PFLU_RS11090	0.40	-1.1
2,446,649	+		PFLU_RS11090	0.40	+0.1
2,446,650	-		PFLU_RS11090	0.40	+0.7
2,446,650	-		PFLU_RS11090	0.40	+1.7
2,446,650	-		PFLU_RS11090	0.40	-0.6
2,446,650	-		PFLU_RS11090	0.40	+0.7
2,446,650	-		PFLU_RS11090	0.40	+0.0
2,446,650	-		PFLU_RS11090	0.40	-2.1
2,446,663	-		PFLU_RS11090	0.41	-0.6
2,446,682	+		PFLU_RS11090	0.44	-0.6
2,446,683	-		PFLU_RS11090	0.44	+2.3
2,446,700	+		PFLU_RS11090	0.46	-0.1
2,446,701	-		PFLU_RS11090	0.46	-1.3
2,446,807	+		PFLU_RS11090	0.60	-1.1
2,446,808	-		PFLU_RS11090	0.60	-2.5
2,446,808	-		PFLU_RS11090	0.60	+1.5
2,446,821	+		PFLU_RS11090	0.62	+1.1
2,446,821	+		PFLU_RS11090	0.62	-2.6
2,446,821	+		PFLU_RS11090	0.62	-0.8
2,447,016	+		PFLU_RS11090	0.88	-1.8
2,447,016	+		PFLU_RS11090	0.88	-1.1
2,447,016	+		PFLU_RS11090	0.88	-0.6
2,447,017	-		PFLU_RS11090	0.88	-2.5
2,447,017	-		PFLU_RS11090	0.88	-2.7
2,447,038	+				-1.6
2,447,038	+				+3.3
2,447,038	+				+1.0
2,447,038	+				+2.5
2,447,038	+				+1.4
2,447,038	+				+1.7
2,447,039	-				+1.3
2,447,039	-				-2.3
2,447,039	-				-1.6
2,447,039	-				-3.5
2,447,039	-				-1.3
2,447,045	+				-0.2
2,447,072	+				+0.9
2,447,073	-				+0.2
2,447,073	-				-1.7
2,447,073	-				+1.7
2,447,073	-				-0.2
2,447,073	-				-0.8
2,447,073	-				+0.2
2,447,106	+				-1.4
2,447,149	-				+1.7
2,447,160	+				-1.5
2,447,161	-				+0.7
2,447,182	+				-1.5
2,447,182	+				-2.1
2,447,182	+				+0.7
2,447,182	+				+0.2
2,447,182	+				-0.8
2,447,182	+				+1.7
2,447,182	+				-0.8
2,447,183	-				-2.3
2,447,183	-				+0.2
2,447,183	-				-2.1
2,447,183	-				-0.6
2,447,183	-				-0.6
2,447,216	-				+2.0
2,447,263	+				+2.2
2,447,263	+				-1.1
2,447,263	+				+0.2
2,447,263	+				-1.4
2,447,263	+				-0.2
2,447,264	-				-2.8
2,447,264	-				+0.9
2,447,264	-				-0.6
2,447,264	-				+5.5
2,447,264	-				-1.1
2,447,280	+				-0.2
2,447,280	+				-0.8
2,447,280	+				-2.2
2,447,280	+				-2.8
2,447,281	-				+1.6
2,447,285	+				+3.3
2,447,285	+				+2.6
2,447,285	+				-0.6
2,447,285	+				-0.6
2,447,285	+				+2.0
2,447,285	+				-0.4
2,447,286	-				+1.8
2,447,286	-				+1.0
2,447,286	-				+2.3
2,447,286	-				-0.8
2,447,312	-				+0.9
2,447,312	-				-0.8
2,447,312	-				-2.9
2,447,312	-				-1.6
2,447,405	-		PFLU_RS11095	0.14	-1.2
2,447,405	-		PFLU_RS11095	0.14	-1.1
2,447,508	+		PFLU_RS11095	0.25	+2.4
2,447,509	-		PFLU_RS11095	0.25	+1.4
2,447,509	-		PFLU_RS11095	0.25	-2.5
2,447,536	+		PFLU_RS11095	0.28	+1.8
2,447,536	+		PFLU_RS11095	0.28	-1.9
2,447,537	-		PFLU_RS11095	0.28	+0.9
2,447,550	-		PFLU_RS11095	0.29	+0.2
2,447,550	-		PFLU_RS11095	0.29	+2.4
2,447,593	-		PFLU_RS11095	0.33	+1.8
2,447,593	-		PFLU_RS11095	0.33	-0.2
2,447,756	+		PFLU_RS11095	0.50	+0.7
2,447,756	+		PFLU_RS11095	0.50	-0.8
2,447,756	+		PFLU_RS11095	0.50	+0.6
2,447,757	-		PFLU_RS11095	0.50	-1.4
2,447,757	-		PFLU_RS11095	0.50	-0.9
2,447,757	-		PFLU_RS11095	0.50	+1.6
2,447,757	-		PFLU_RS11095	0.50	-0.9
2,447,779	+		PFLU_RS11095	0.52	+0.8
2,447,809	+		PFLU_RS11095	0.55	-1.7
2,447,837	+		PFLU_RS11095	0.58	+0.2
2,447,837	+		PFLU_RS11095	0.58	-1.5
2,447,838	-		PFLU_RS11095	0.58	+0.7
2,447,838	-		PFLU_RS11095	0.58	-3.4
2,447,838	-		PFLU_RS11095	0.58	-2.6
2,447,853	+		PFLU_RS11095	0.60	-0.6
2,447,853	+		PFLU_RS11095	0.60	+0.8
2,447,854	-		PFLU_RS11095	0.60	+0.3
2,447,854	-		PFLU_RS11095	0.60	-2.2
2,447,854	-		PFLU_RS11095	0.60	-0.1
2,447,861	-		PFLU_RS11095	0.61	+0.2
2,447,904	+		PFLU_RS11095	0.65	-0.6
2,447,912	-		PFLU_RS11095	0.66	+4.1
2,448,008	+		PFLU_RS11095	0.76	-1.2
2,448,008	+		PFLU_RS11095	0.76	-1.4
2,448,009	-		PFLU_RS11095	0.76	-0.7
2,448,009	-		PFLU_RS11095	0.76	+0.1
2,448,064	+		PFLU_RS11095	0.81	-1.1
2,448,065	-		PFLU_RS11095	0.81	+0.9
2,448,065	-		PFLU_RS11095	0.81	-0.1
2,448,065	-		PFLU_RS11095	0.81	-0.8
2,448,077	+		PFLU_RS11095	0.83	+2.5
2,448,078	-		PFLU_RS11095	0.83	+2.2
2,448,078	-		PFLU_RS11095	0.83	-2.4
2,448,080	+		PFLU_RS11095	0.83	-1.8
2,448,080	+		PFLU_RS11095	0.83	+2.1
2,448,080	+		PFLU_RS11095	0.83	-1.6
2,448,081	-		PFLU_RS11095	0.83	-1.4
2,448,090	+		PFLU_RS11095	0.84	+0.8
2,448,091	-		PFLU_RS11095	0.84	-1.4
2,448,091	-		PFLU_RS11095	0.84	-0.1
2,448,091	-		PFLU_RS11095	0.84	-1.2
2,448,114	+		PFLU_RS11095	0.86	-0.2
2,448,115	-		PFLU_RS11095	0.86	+2.0
2,448,194	+				+0.3
2,448,194	+				+0.0
2,448,195	-				+1.4
2,448,196	+				-0.6
2,448,196	+				+2.7
2,448,196	+				-0.8
2,448,196	+				-1.5
2,448,196	+				+0.2
2,448,196	+				-0.2
2,448,196	+				-0.6
2,448,203	+				-2.6
2,448,203	+				+1.6
2,448,203	+				+1.1
2,448,242	-				+0.0
2,448,242	-				-2.9
2,448,245	+				+0.8
2,448,246	-				+0.3
2,448,246	-				+2.1
2,448,253	-				+0.2
2,448,270	+				+1.5
2,448,270	+				-2.3
2,448,270	+				+3.3
2,448,271	-				-0.8
2,448,271	-				-0.8
2,448,312	+		PFLU_RS11100	0.15	-2.3
2,448,313	-		PFLU_RS11100	0.16	-2.1
2,448,313	-		PFLU_RS11100	0.16	-0.6
2,448,313	-		PFLU_RS11100	0.16	+0.2
2,448,313	-		PFLU_RS11100	0.16	-2.3
2,448,396	+		PFLU_RS11100	0.36	-2.3
2,448,396	+		PFLU_RS11100	0.36	-1.1
2,448,397	-		PFLU_RS11100	0.37	+1.6
2,448,397	-		PFLU_RS11100	0.37	-1.4
2,448,397	-		PFLU_RS11100	0.37	-1.1
2,448,397	-		PFLU_RS11100	0.37	+0.8
2,448,425	+		PFLU_RS11100	0.44	-0.8
2,448,468	-		PFLU_RS11100	0.55	-1.9
2,448,468	-		PFLU_RS11100	0.55	-0.1
2,448,478	+		PFLU_RS11100	0.57	+2.6
2,448,478	+		PFLU_RS11100	0.57	-0.6
2,448,479	-		PFLU_RS11100	0.57	-0.2
2,448,558	+		PFLU_RS11100	0.77	+1.4
2,448,559	-		PFLU_RS11100	0.77	-1.8
2,448,785	+				-0.1
2,448,791	+				+3.2
2,448,791	+				-0.8
2,448,792	-				-0.6
2,448,792	-				+1.3
2,448,796	+				-0.1
2,448,796	+				-0.8
2,448,797	-				+0.6
2,448,797	-				-0.5
2,448,797	-				+1.2
2,448,826	+				+1.9
2,448,840	+				+0.9
2,448,840	+				-0.2
2,448,840	+				+0.2
2,448,840	+				+1.4
2,448,840	+				-0.2
2,448,840	+				-2.3
2,448,841	-				+0.8
2,448,841	-				-1.4
2,448,841	-				-1.7
2,448,841	-				+0.1
2,448,841	-				+1.2
2,448,841	-				+0.2
2,448,841	-				-1.1
2,448,841	-				+1.2
2,448,851	+				-0.6
2,448,852	-				-0.7
2,448,895	-				-0.1
2,448,950	-		PFLU_RS31545	0.21	+1.8
2,448,994	+		PFLU_RS31545	0.57	-0.8
2,448,994	+		PFLU_RS31545	0.57	-0.6
2,448,995	-		PFLU_RS31545	0.58	+1.2
2,448,995	-		PFLU_RS31545	0.58	-1.6
2,449,029	-		PFLU_RS31545	0.87	+2.0
2,449,130	+				-0.1
2,449,130	+				-1.6
2,449,130	+				+0.3
2,449,130	+				+0.4
2,449,130	+				+0.8
2,449,130	+				+2.7
2,449,131	-				+3.3
2,449,131	-				-1.5
2,449,131	-				+0.6
2,449,131	-				-3.5
2,449,131	-				+1.0
2,449,206	+				-1.2
2,449,206	+				-0.6
2,449,206	+				-0.6
2,449,206	+				-0.1
2,449,207	-				-0.1
2,449,207	-				-0.8
2,449,240	-		PFLU_RS11105	0.11	-0.6
2,449,240	-		PFLU_RS11105	0.11	-0.7
2,449,240	-		PFLU_RS11105	0.11	+1.3