Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05550

Experiment: m-Inositol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m-Inositol (C)
1,253,106	+		PFLU_RS05545	0.87	+1.4
1,253,106	+		PFLU_RS05545	0.87	+0.9
1,253,106	+		PFLU_RS05545	0.87	-0.0
1,253,106	+		PFLU_RS05545	0.87	+2.5
1,253,106	+		PFLU_RS05545	0.87	-2.1
1,253,106	+		PFLU_RS05545	0.87	-1.6
1,253,106	+		PFLU_RS05545	0.87	-0.9
1,253,107	-		PFLU_RS05545	0.87	-1.0
1,253,107	-		PFLU_RS05545	0.87	+0.2
1,253,107	-		PFLU_RS05545	0.87	-0.7
1,253,107	-		PFLU_RS05545	0.87	-2.1
1,253,107	-		PFLU_RS05545	0.87	+1.7
1,253,156	+		PFLU_RS05545	0.87	-2.3
1,253,156	+		PFLU_RS05545	0.87	-3.2
1,253,156	+		PFLU_RS05545	0.87	-0.5
1,253,156	+		PFLU_RS05545	0.87	+0.1
1,253,157	-		PFLU_RS05545	0.87	+0.5
1,253,157	-		PFLU_RS05545	0.87	+1.4
1,253,214	+		PFLU_RS05545	0.89	-0.8
1,253,214	+		PFLU_RS05545	0.89	+1.9
1,253,214	+		PFLU_RS05545	0.89	+0.8
1,253,214	+		PFLU_RS05545	0.89	-1.1
1,253,215	-		PFLU_RS05545	0.89	+1.7
1,253,267	+		PFLU_RS05545	0.89	+0.4
1,253,268	-		PFLU_RS05545	0.89	-1.3
1,253,531	+				+0.4
1,253,532	-				-1.3
1,253,547	+				-0.8
1,253,547	+				-2.7
1,253,547	+				+1.1
1,253,547	+				-0.9
1,253,547	+				+0.1
1,253,547	+				-0.3
1,253,547	+				+2.6
1,253,547	+				-0.2
1,253,547	+				+0.7
1,253,548	-				-2.7
1,253,548	-				+0.5
1,253,548	-				-2.6
1,253,548	-				-0.1
1,253,563	-				+2.5
1,253,563	-				-1.8
1,253,630	+				-2.0
1,253,630	+				-2.0
1,253,630	+				-0.1
1,253,630	+				+1.7
1,253,630	+				+1.3
1,253,630	+				+0.7
1,253,630	+				-0.7
1,253,630	+				-0.5
1,253,630	+				+0.0
1,253,631	-				-3.1
1,253,631	-				-0.0
1,253,631	-				-0.1
1,253,631	-				-1.3
1,253,631	-				+1.0
1,253,631	-				+0.8
1,253,631	-				-0.1
1,253,631	-				-0.9
1,253,631	-				-2.9
1,253,631	-				-1.1
1,253,631	-				-0.9
1,253,631	-				+0.1
1,253,631	-				-2.5
1,253,631	-				+1.0
1,253,786	+				+1.4
1,253,786	+				-2.7
1,253,786	+				-1.1
1,253,786	+				+0.7
1,253,787	-				+1.2
1,253,787	-				-0.6
1,253,822	-				+0.2
1,253,873	+				+0.7
1,253,912	+				-0.9
1,253,912	+				-0.7
1,253,912	+				-0.7
1,253,912	+				+0.3
1,253,912	+				+0.5
1,253,912	+				-0.5
1,253,913	-				+1.9
1,253,913	-				+0.5
1,253,913	-				-1.0
1,253,913	-				-0.8
1,253,913	-				+0.6
1,253,913	-				-1.6
1,253,913	-				-1.1
1,253,913	-				+0.2
1,253,913	-				+1.2
1,253,913	-				+1.4
1,253,913	-				+0.8
1,253,913	-				+0.1
1,253,913	-				-1.7
1,253,913	-				-0.8
1,253,916	+				-1.1
1,253,916	+				-2.3
1,253,916	+				+1.6
1,253,916	+				-0.7
1,253,916	+				-1.5
1,253,916	+				+0.8
1,253,916	+				+1.6
1,253,916	+				-0.1
1,253,916	+				-1.5
1,253,916	+				-1.3
1,253,916	+				-0.9
1,253,916	+				-0.5
1,253,916	+				-1.3
1,253,916	+				-3.4
1,253,916	+				-0.6
1,253,916	+				-2.4
1,253,916	+				-0.5
1,253,916	+				-2.2
1,253,917	-				+0.5
1,253,917	-				+1.1
1,253,917	-				+0.2
1,253,917	-				+1.3
1,253,917	-				+0.2
1,253,917	-				+1.2
1,253,917	-				-0.1
1,253,917	-				+1.4
1,253,917	-				-2.9
1,253,917	-				-0.8
1,253,917	-				+0.0
1,253,917	-				+1.1
1,253,917	-				+2.3
1,253,917	-				-2.3
1,253,917	-				-1.1
1,253,917	-				-0.4
1,253,917	-				+0.5
1,253,917	-				-0.0
1,253,917	-				+2.6
1,253,917	-				+1.3
1,253,917	-				-2.8
1,253,917	-				-1.0
1,254,006	+				-1.6
1,254,007	-				+0.4
1,254,052	-				-0.1
1,254,063	+				+0.7
1,254,063	+				+0.5
1,254,063	+				+1.6
1,254,064	-				+1.0
1,254,106	+				-1.3
1,254,106	+				-1.6
1,254,153	-		PFLU_RS05550	0.12	+1.4
1,254,386	+		PFLU_RS05550	0.34	+0.3
1,254,386	+		PFLU_RS05550	0.34	-2.0
1,254,387	-		PFLU_RS05550	0.35	+0.3
1,254,387	-		PFLU_RS05550	0.35	+0.3
1,254,387	-		PFLU_RS05550	0.35	-2.5
1,254,388	+		PFLU_RS05550	0.35	-0.7
1,254,388	+		PFLU_RS05550	0.35	+1.0
1,254,388	+		PFLU_RS05550	0.35	-2.7
1,254,388	+		PFLU_RS05550	0.35	-0.7
1,254,389	-		PFLU_RS05550	0.35	+1.6
1,254,389	-		PFLU_RS05550	0.35	-0.1
1,254,389	-		PFLU_RS05550	0.35	+1.4
1,254,435	+		PFLU_RS05550	0.39	+0.1
1,254,435	+		PFLU_RS05550	0.39	+0.0
1,254,652	-		PFLU_RS05550	0.60	+0.4
1,254,652	-		PFLU_RS05550	0.60	+1.9
1,254,652	-		PFLU_RS05550	0.60	+0.3
1,254,722	+		PFLU_RS05550	0.67	+1.7
1,254,723	-		PFLU_RS05550	0.67	+2.1
1,254,723	-		PFLU_RS05550	0.67	+0.6
1,254,839	-		PFLU_RS05550	0.79	-1.5
1,254,890	-		PFLU_RS05550	0.84	-0.8
1,254,890	-		PFLU_RS05550	0.84	+0.7
1,254,980	+				-2.4
1,254,980	+				-3.1
1,255,063	+				-1.2
1,255,063	+				-3.5
1,255,063	+				+0.3
1,255,063	+				+1.0
1,255,064	-				-2.0
1,255,064	-				-2.1
1,255,078	-				-0.8
1,255,087	+				+0.7
1,255,087	+				+2.4
1,255,087	+				+0.1
1,255,087	+				+1.5
1,255,087	+				+0.7
1,255,088	-				+0.3
1,255,088	-				+1.6
1,255,094	-				+0.9
1,255,116	-				-1.7
1,255,116	-				+2.3
1,255,305	+		PFLU_RS05555	0.30	+0.8
1,255,305	+		PFLU_RS05555	0.30	+0.3
1,255,346	+		PFLU_RS05555	0.36	+1.1
1,255,407	+		PFLU_RS05555	0.45	-0.3
1,255,407	+		PFLU_RS05555	0.45	-1.2
1,255,407	+		PFLU_RS05555	0.45	+1.9
1,255,407	+		PFLU_RS05555	0.45	-2.0
1,255,407	+		PFLU_RS05555	0.45	-0.5
1,255,408	-		PFLU_RS05555	0.46	+1.2
1,255,408	-		PFLU_RS05555	0.46	+0.4
1,255,408	-		PFLU_RS05555	0.46	-0.1
1,255,408	-		PFLU_RS05555	0.46	-1.1
1,255,408	-		PFLU_RS05555	0.46	+0.6
1,255,408	-		PFLU_RS05555	0.46	+2.5
1,255,408	-		PFLU_RS05555	0.46	+0.5
1,255,408	-		PFLU_RS05555	0.46	+1.6
1,255,408	-		PFLU_RS05555	0.46	+1.9
1,255,408	-		PFLU_RS05555	0.46	+0.2
1,255,408	-		PFLU_RS05555	0.46	-1.1
1,255,464	+		PFLU_RS05555	0.54	+1.4
1,255,464	+		PFLU_RS05555	0.54	+1.7
1,255,464	+		PFLU_RS05555	0.54	+1.1
1,255,464	+		PFLU_RS05555	0.54	+0.9
1,255,464	+		PFLU_RS05555	0.54	+1.0
1,255,465	-		PFLU_RS05555	0.54	+1.6
1,255,465	-		PFLU_RS05555	0.54	+0.1
1,255,465	-		PFLU_RS05555	0.54	-1.6
1,255,465	-		PFLU_RS05555	0.54	+2.5
1,255,465	-		PFLU_RS05555	0.54	+2.2
1,255,465	-		PFLU_RS05555	0.54	+0.9
1,255,465	-		PFLU_RS05555	0.54	+0.3
1,255,465	-		PFLU_RS05555	0.54	+1.1
1,255,465	-		PFLU_RS05555	0.54	+1.4
1,255,465	-		PFLU_RS05555	0.54	+2.0
1,255,494	+		PFLU_RS05555	0.59	+0.5
1,255,495	-		PFLU_RS05555	0.59	-0.7
1,255,495	-		PFLU_RS05555	0.59	+0.9
1,255,495	-		PFLU_RS05555	0.59	+0.6
1,255,495	-		PFLU_RS05555	0.59	+0.5
1,255,602	+		PFLU_RS05555	0.75	+1.4
1,255,603	-		PFLU_RS05555	0.75	-2.0
1,255,686	+		PFLU_RS05555	0.88	+0.5
1,255,686	+		PFLU_RS05555	0.88	+1.6
1,255,687	-		PFLU_RS05555	0.88	-2.1
1,255,687	-		PFLU_RS05555	0.88	-1.2
1,255,687	-		PFLU_RS05555	0.88	-0.4
1,255,687	-		PFLU_RS05555	0.88	-0.4
1,255,761	+				-1.9
1,255,762	-				+0.9
1,255,895	+				-0.8
1,255,895	+				+1.4
1,255,895	+				+1.4
1,255,896	-				-2.4
1,255,928	-				+1.1
1,255,928	-				-0.9