Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19275

Experiment: D-Glucuronic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucuronic (C)
4,357,641	+		PFLU_RS19265	0.20	+0.9
4,357,641	+		PFLU_RS19265	0.20	+2.1
4,357,641	+		PFLU_RS19265	0.20	-1.9
4,357,668	+		PFLU_RS19265	0.24	-1.7
4,357,668	+		PFLU_RS19265	0.24	+0.1
4,357,668	+		PFLU_RS19265	0.24	+0.7
4,357,668	+		PFLU_RS19265	0.24	-0.7
4,357,668	+		PFLU_RS19265	0.24	-0.9
4,357,668	+		PFLU_RS19265	0.24	+2.4
4,357,668	+		PFLU_RS19265	0.24	-1.7
4,357,668	+		PFLU_RS19265	0.24	-0.3
4,357,669	-		PFLU_RS19265	0.24	+1.0
4,357,669	-		PFLU_RS19265	0.24	+0.7
4,357,669	-		PFLU_RS19265	0.24	+3.5
4,357,669	-		PFLU_RS19265	0.24	-0.3
4,357,669	-		PFLU_RS19265	0.24	-0.2
4,357,669	-		PFLU_RS19265	0.24	+0.9
4,357,669	-		PFLU_RS19265	0.24	+1.5
4,357,669	-		PFLU_RS19265	0.24	-1.0
4,357,669	-		PFLU_RS19265	0.24	+1.1
4,357,669	-		PFLU_RS19265	0.24	-0.6
4,357,669	-		PFLU_RS19265	0.24	-0.7
4,357,669	-		PFLU_RS19265	0.24	+0.3
4,357,755	+		PFLU_RS19265	0.38	-1.3
4,357,831	-		PFLU_RS19265	0.51	-2.3
4,357,867	+		PFLU_RS19265	0.56	+1.3
4,357,867	+		PFLU_RS19265	0.56	+1.4
4,357,867	+		PFLU_RS19265	0.56	+2.5
4,357,868	-		PFLU_RS19265	0.57	-2.2
4,357,868	-		PFLU_RS19265	0.57	-0.4
4,357,868	-		PFLU_RS19265	0.57	+0.8
4,357,869	+		PFLU_RS19265	0.57	-1.1
4,357,869	+		PFLU_RS19265	0.57	-1.0
4,357,869	+		PFLU_RS19265	0.57	+2.2
4,357,869	+		PFLU_RS19265	0.57	-2.4
4,357,869	+		PFLU_RS19265	0.57	+1.4
4,357,869	+		PFLU_RS19265	0.57	+1.5
4,357,869	+		PFLU_RS19265	0.57	-0.3
4,357,869	+		PFLU_RS19265	0.57	+2.4
4,357,869	+		PFLU_RS19265	0.57	-0.1
4,357,869	+		PFLU_RS19265	0.57	+1.7
4,357,870	-		PFLU_RS19265	0.57	+0.4
4,357,870	-		PFLU_RS19265	0.57	-2.2
4,357,870	-		PFLU_RS19265	0.57	-0.7
4,357,870	-		PFLU_RS19265	0.57	+1.2
4,357,870	-		PFLU_RS19265	0.57	-1.7
4,357,870	-		PFLU_RS19265	0.57	+0.4
4,357,963	-		PFLU_RS19265	0.72	+1.0
4,357,986	+		PFLU_RS19265	0.76	-0.3
4,357,986	+		PFLU_RS19265	0.76	-2.5
4,357,986	+		PFLU_RS19265	0.76	+1.7
4,357,986	+		PFLU_RS19265	0.76	+2.6
4,357,986	+		PFLU_RS19265	0.76	+2.2
4,357,986	+		PFLU_RS19265	0.76	+1.3
4,357,987	-		PFLU_RS19265	0.76	+1.2
4,357,987	-		PFLU_RS19265	0.76	-2.6
4,357,987	-		PFLU_RS19265	0.76	+0.1
4,357,987	-		PFLU_RS19265	0.76	-0.4
4,357,989	+		PFLU_RS19265	0.76	+0.0
4,357,989	+		PFLU_RS19265	0.76	+0.7
4,357,989	+		PFLU_RS19265	0.76	+1.0
4,357,990	-		PFLU_RS19265	0.76	-1.3
4,357,990	-		PFLU_RS19265	0.76	+1.4
4,357,990	-		PFLU_RS19265	0.76	-0.7
4,358,053	-		PFLU_RS19265	0.86	+0.6
4,358,171	+				+0.3
4,358,172	-				-1.0
4,358,172	-				-0.3
4,358,172	-				-0.1
4,358,216	+				+1.0
4,358,216	+				-1.3
4,358,216	+				+2.1
4,358,217	-				-0.7
4,358,245	+				+0.1
4,358,245	+				-1.5
4,358,245	+				-1.9
4,358,542	+		PFLU_RS19270	0.79	-2.6
4,358,542	+		PFLU_RS19270	0.79	-2.4
4,358,542	+		PFLU_RS19270	0.79	-0.4
4,358,543	-		PFLU_RS19270	0.79	+0.7
4,358,543	-		PFLU_RS19270	0.79	+0.7
4,358,543	-		PFLU_RS19270	0.79	-1.5
4,358,543	-		PFLU_RS19270	0.79	+1.3
4,358,543	-		PFLU_RS19270	0.79	-0.8
4,358,543	-		PFLU_RS19270	0.79	+0.3
4,358,543	-		PFLU_RS19270	0.79	-1.7
4,358,580	+		PFLU_RS19270	0.89	-2.2
4,358,580	+		PFLU_RS19270	0.89	+0.4
4,358,580	+		PFLU_RS19270	0.89	+1.7
4,358,580	+		PFLU_RS19270	0.89	-0.7
4,358,580	+		PFLU_RS19270	0.89	+1.3
4,358,580	+		PFLU_RS19270	0.89	-1.0
4,358,580	+		PFLU_RS19270	0.89	-2.3
4,358,581	-		PFLU_RS19270	0.89	-0.7
4,358,581	-		PFLU_RS19270	0.89	-0.9
4,358,596	+				-0.3
4,358,597	-				-2.4
4,358,597	-				-2.5
4,358,597	-				-1.7
4,358,617	+				+0.5
4,358,693	+				-0.2
4,358,693	+				-2.2
4,358,693	+				+1.3
4,358,807	+		PFLU_RS19275	0.21	+1.0
4,358,807	+		PFLU_RS19275	0.21	+1.0
4,358,808	-		PFLU_RS19275	0.22	-0.7
4,358,808	-		PFLU_RS19275	0.22	-1.7
4,358,915	+		PFLU_RS19275	0.34	-1.9
4,358,915	+		PFLU_RS19275	0.34	+0.7
4,358,916	-		PFLU_RS19275	0.34	+0.2
4,358,916	-		PFLU_RS19275	0.34	+0.1
4,358,916	-		PFLU_RS19275	0.34	-1.3
4,358,916	-		PFLU_RS19275	0.34	-0.3
4,358,936	+		PFLU_RS19275	0.36	-0.4
4,359,188	-		PFLU_RS19275	0.66	-0.5
4,359,410	+				+2.3
4,359,413	+				-0.0
4,359,414	-				-1.1
4,359,414	-				-0.1
4,359,414	-				+0.7
4,359,414	-				-0.7
4,359,450	+				-0.7
4,359,451	-				-1.2
4,359,451	-				+0.9
4,359,575	+				+0.1
4,359,576	-				+0.8
4,359,576	-				-0.3
4,359,742	+				-2.2
4,359,782	+		PFLU_RS19280	0.11	+2.0
4,359,782	+		PFLU_RS19280	0.11	+0.0
4,359,783	-		PFLU_RS19280	0.11	-0.2
4,359,783	-		PFLU_RS19280	0.11	-0.6
4,359,888	+		PFLU_RS19280	0.19	+2.3
4,359,888	+		PFLU_RS19280	0.19	+0.4
4,359,888	+		PFLU_RS19280	0.19	+1.8
4,359,888	+		PFLU_RS19280	0.19	+0.7
4,359,888	+		PFLU_RS19280	0.19	+2.0
4,359,889	-		PFLU_RS19280	0.19	+0.3
4,359,889	-		PFLU_RS19280	0.19	-1.5
4,359,889	-		PFLU_RS19280	0.19	-0.7
4,359,917	+		PFLU_RS19280	0.22	+0.8
4,359,917	+		PFLU_RS19280	0.22	-2.5
4,359,918	-		PFLU_RS19280	0.22	-0.6
4,359,918	-		PFLU_RS19280	0.22	-2.1
4,360,169	+		PFLU_RS19280	0.42	-0.9
4,360,169	+		PFLU_RS19280	0.42	+0.2
4,360,283	+		PFLU_RS19280	0.51	-1.7
4,360,283	+		PFLU_RS19280	0.51	+2.1
4,360,283	+		PFLU_RS19280	0.51	+0.3
4,360,283	+		PFLU_RS19280	0.51	-0.9
4,360,283	+		PFLU_RS19280	0.51	-0.7
4,360,283	+		PFLU_RS19280	0.51	+2.4
4,360,284	-		PFLU_RS19280	0.51	+0.8
4,360,284	-		PFLU_RS19280	0.51	+0.3
4,360,340	-		PFLU_RS19280	0.55	-0.4
4,360,343	+		PFLU_RS19280	0.55	-1.5
4,360,344	-		PFLU_RS19280	0.55	+1.6
4,360,344	-		PFLU_RS19280	0.55	+1.5
4,360,344	-		PFLU_RS19280	0.55	+1.7
4,360,355	+		PFLU_RS19280	0.56	+1.3
4,360,355	+		PFLU_RS19280	0.56	+0.9
4,360,355	+		PFLU_RS19280	0.56	+2.2
4,360,355	+		PFLU_RS19280	0.56	-0.3
4,360,355	+		PFLU_RS19280	0.56	-0.7
4,360,355	+		PFLU_RS19280	0.56	+1.0
4,360,356	-		PFLU_RS19280	0.56	+0.8
4,360,356	-		PFLU_RS19280	0.56	-3.1
4,360,356	-		PFLU_RS19280	0.56	+0.9
4,360,356	-		PFLU_RS19280	0.56	+0.3
4,360,356	-		PFLU_RS19280	0.56	-0.1
4,360,356	-		PFLU_RS19280	0.56	+1.1
4,360,356	-		PFLU_RS19280	0.56	+0.9
4,360,356	-		PFLU_RS19280	0.56	-0.1
4,360,356	-		PFLU_RS19280	0.56	+1.3
4,360,356	-		PFLU_RS19280	0.56	-1.7
4,360,356	-		PFLU_RS19280	0.56	+0.5