Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11745

Experiment: D-Glucuronic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucuronic (C)
2,605,408	+		PFLU_RS11740	0.25	+1.2
2,605,478	-		PFLU_RS11740	0.31	+1.9
2,605,478	-		PFLU_RS11740	0.31	-0.1
2,605,478	-		PFLU_RS11740	0.31	+1.4
2,605,560	+		PFLU_RS11740	0.38	-1.3
2,605,900	+		PFLU_RS11740	0.66	+0.6
2,605,900	+		PFLU_RS11740	0.66	-2.5
2,605,900	+		PFLU_RS11740	0.66	-2.8
2,605,900	+		PFLU_RS11740	0.66	+0.1
2,605,900	+		PFLU_RS11740	0.66	+0.1
2,605,900	+		PFLU_RS11740	0.66	-2.9
2,605,900	+		PFLU_RS11740	0.66	+0.1
2,605,900	+		PFLU_RS11740	0.66	+0.2
2,605,900	+		PFLU_RS11740	0.66	-0.5
2,605,900	+		PFLU_RS11740	0.66	-1.9
2,605,900	+		PFLU_RS11740	0.66	+2.0
2,605,900	+		PFLU_RS11740	0.66	+0.5
2,605,900	+		PFLU_RS11740	0.66	-0.5
2,605,900	+		PFLU_RS11740	0.66	-0.1
2,605,900	+		PFLU_RS11740	0.66	-1.1
2,605,900	+		PFLU_RS11740	0.66	-2.1
2,605,900	+		PFLU_RS11740	0.66	-0.5
2,605,900	+		PFLU_RS11740	0.66	+0.2
2,605,900	+		PFLU_RS11740	0.66	+1.9
2,605,900	+		PFLU_RS11740	0.66	-0.1
2,605,901	-		PFLU_RS11740	0.66	-1.3
2,605,901	-		PFLU_RS11740	0.66	-1.3
2,605,901	-		PFLU_RS11740	0.66	-1.3
2,605,901	-		PFLU_RS11740	0.66	-0.3
2,605,901	-		PFLU_RS11740	0.66	-0.1
2,605,901	-		PFLU_RS11740	0.66	+1.0
2,605,901	-		PFLU_RS11740	0.66	+0.9
2,605,901	-		PFLU_RS11740	0.66	+1.5
2,605,901	-		PFLU_RS11740	0.66	-0.9
2,605,901	-		PFLU_RS11740	0.66	-2.0
2,605,943	-		PFLU_RS11740	0.70	-0.6
2,606,056	+		PFLU_RS11740	0.79	+0.9
2,606,140	+		PFLU_RS11740	0.86	-0.9
2,606,141	-		PFLU_RS11740	0.86	+0.3
2,606,241	+				-1.2
2,606,241	+				+1.7
2,606,241	+				-1.1
2,606,241	+				-0.9
2,606,241	+				-0.4
2,606,241	+				+0.7
2,606,241	+				-1.3
2,606,241	+				-0.8
2,606,241	+				-1.3
2,606,241	+				+0.7
2,606,241	+				-2.0
2,606,241	+				-1.3
2,606,241	+				+1.5
2,606,241	+				+1.5
2,606,241	+				+2.3
2,606,241	+				+0.5
2,606,241	+				+0.9
2,606,241	+				-1.3
2,606,242	-				-0.9
2,606,242	-				-0.4
2,606,242	-				+4.0
2,606,242	-				-2.0
2,606,242	-				+0.4
2,606,242	-				-0.9
2,606,242	-				+1.0
2,606,242	-				+0.5
2,606,242	-				-0.2
2,606,242	-				+0.9
2,606,242	-				+0.5
2,606,242	-				-0.5
2,606,244	-				+1.5
2,606,308	+				-0.5
2,606,423	+		PFLU_RS11745	0.14	-0.5
2,606,423	+		PFLU_RS11745	0.14	-0.2
2,606,423	+		PFLU_RS11745	0.14	-0.3
2,606,423	+		PFLU_RS11745	0.14	+0.5
2,606,423	+		PFLU_RS11745	0.14	-0.1
2,606,424	-		PFLU_RS11745	0.14	+0.7
2,606,424	-		PFLU_RS11745	0.14	-1.2
2,606,424	-		PFLU_RS11745	0.14	+1.0
2,606,424	-		PFLU_RS11745	0.14	+1.6
2,606,426	+		PFLU_RS11745	0.14	-2.6
2,606,426	+		PFLU_RS11745	0.14	-1.3
2,606,426	+		PFLU_RS11745	0.14	+3.2
2,606,426	+		PFLU_RS11745	0.14	-1.1
2,606,426	+		PFLU_RS11745	0.14	-1.6
2,606,426	+		PFLU_RS11745	0.14	+0.8
2,606,426	+		PFLU_RS11745	0.14	+1.5
2,606,427	-		PFLU_RS11745	0.14	+2.2
2,606,427	-		PFLU_RS11745	0.14	+2.0
2,606,427	-		PFLU_RS11745	0.14	-0.9
2,606,427	-		PFLU_RS11745	0.14	-1.1
2,606,427	-		PFLU_RS11745	0.14	-1.4
2,606,427	-		PFLU_RS11745	0.14	+2.0
2,606,594	-		PFLU_RS11745	0.35	-1.5
2,606,765	+		PFLU_RS11745	0.56	+1.6
2,606,765	+		PFLU_RS11745	0.56	-0.1
2,606,766	-		PFLU_RS11745	0.56	-0.3
2,606,766	-		PFLU_RS11745	0.56	-0.1
2,607,023	+		PFLU_RS11745	0.88	+1.1
2,607,191	+				+1.2
2,607,191	+				-2.0
2,607,191	+				+0.4
2,607,191	+				-2.2
2,607,192	-				+0.3
2,607,192	-				+1.4
2,607,192	-				+0.5
2,607,192	-				-0.9
2,607,192	-				-1.3
2,607,192	-				-0.7
2,607,192	-				+1.7
2,607,195	+				+1.5
2,607,195	+				-1.0
2,607,195	+				-1.6
2,607,195	+				+0.7
2,607,195	+				+1.1
2,607,195	+				-0.9
2,607,195	+				-0.5
2,607,196	-				-2.0
2,607,196	-				+1.9
2,607,196	-				+2.2
2,607,196	-				-0.1
2,607,196	-				-1.1
2,607,196	-				+1.3
2,607,199	+				+1.1
2,607,199	+				+2.5
2,607,199	+				-0.1
2,607,199	+				+1.0
2,607,199	+				-0.2
2,607,199	+				+0.9
2,607,199	+				+2.3
2,607,199	+				+0.2
2,607,199	+				+0.0
2,607,200	-				-2.2
2,607,200	-				+1.4
2,607,200	-				-1.0
2,607,200	-				-0.5
2,607,200	-				-0.1
2,607,200	-				-1.6
2,607,200	-				-1.9
2,607,200	-				-0.4
2,607,200	-				+1.2
2,607,200	-				-0.5
2,607,200	-				+3.0
2,607,200	-				+0.7
2,607,200	-				-0.3
2,607,217	-				+3.7
2,607,217	-				-1.2
2,607,277	+				+1.6
2,607,278	-				+0.0
2,607,278	-				-2.1
2,607,278	-				+1.1
2,607,278	-				-1.4
2,607,284	+				-0.6
2,607,345	+				-0.4
2,607,345	+				+2.3
2,607,345	+				-1.1
2,607,345	+				-0.8
2,607,345	+				+0.7
2,607,345	+				-1.1
2,607,345	+				-1.9
2,607,345	+				+1.7
2,607,355	+				-2.0
2,607,355	+				+0.5
2,607,457	+				-1.4
2,607,457	+				+0.6
2,607,581	+		PFLU_RS11750	0.21	-0.3
2,607,860	+		PFLU_RS11750	0.53	-0.5
2,607,860	+		PFLU_RS11750	0.53	-0.7
2,607,861	-		PFLU_RS11750	0.53	+0.7
2,607,991	+		PFLU_RS11750	0.68	-0.0
2,607,992	-		PFLU_RS11750	0.68	-2.0
2,607,992	-		PFLU_RS11750	0.68	-0.3
2,607,992	-		PFLU_RS11750	0.68	-2.2
2,608,054	+		PFLU_RS11750	0.75	+0.9
2,608,054	+		PFLU_RS11750	0.75	+2.1
2,608,054	+		PFLU_RS11750	0.75	-0.2
2,608,054	+		PFLU_RS11750	0.75	+0.1
2,608,054	+		PFLU_RS11750	0.75	-2.3
2,608,054	+		PFLU_RS11750	0.75	-2.2
2,608,055	-		PFLU_RS11750	0.75	+0.5
2,608,055	-		PFLU_RS11750	0.75	+1.9
2,608,055	-		PFLU_RS11750	0.75	+1.1