Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28295

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
6,297,876	+				-0.6
6,297,876	+				-0.0
6,297,876	+				-0.3
6,297,876	+				+0.2
6,297,876	+				-1.5
6,297,877	-				-1.9
6,297,877	-				-0.7
6,297,877	-				-0.8
6,297,877	-				-0.5
6,297,877	-				+0.0
6,297,877	-				+0.5
6,297,926	+				+0.6
6,297,926	+				+0.3
6,297,926	+				+0.8
6,297,926	+				-0.2
6,297,926	+				-0.3
6,297,927	-				-0.3
6,297,927	-				+0.9
6,297,927	-				-0.1
6,297,927	-				+1.3
6,297,927	-				+0.4
6,297,964	+				-2.2
6,297,964	+				+0.2
6,297,964	+				-2.0
6,297,965	-				+0.5
6,298,011	+				-0.3
6,298,018	+				-0.6
6,298,018	+				+0.4
6,298,018	+				+0.8
6,298,018	+				+0.2
6,298,018	+				+0.2
6,298,018	+				+0.8
6,298,018	+				-0.7
6,298,019	-				+2.7
6,298,019	-				+0.8
6,298,019	-				-1.3
6,298,019	-				-1.5
6,298,019	-				-1.8
6,298,029	+				-0.9
6,298,029	+				-0.1
6,298,029	+				+0.4
6,298,030	-				-0.6
6,298,050	+				+1.8
6,298,051	-				+1.5
6,298,074	+				-0.8
6,298,074	+				-0.0
6,298,074	+				-0.8
6,298,075	-				+1.7
6,298,075	-				+0.8
6,298,075	-				+0.2
6,298,075	-				-1.7
6,298,127	+				+0.4
6,298,128	-				+0.4
6,298,255	+		PFLU_RS31840	0.40	+0.6
6,298,255	+		PFLU_RS31840	0.40	-1.9
6,298,365	+				-0.9
6,298,365	+				+1.0
6,298,382	+				-0.1
6,298,428	-				-0.4
6,298,428	-				-0.9
6,298,494	-		PFLU_RS28290	0.16	-0.7
6,298,539	+		PFLU_RS28290	0.26	+0.3
6,298,539	+		PFLU_RS28290	0.26	+0.5
6,298,539	+		PFLU_RS28290	0.26	+0.8
6,298,539	+		PFLU_RS28290	0.26	+0.3
6,298,540	-		PFLU_RS28290	0.26	+0.1
6,298,540	-		PFLU_RS28290	0.26	+1.9
6,298,540	-		PFLU_RS28290	0.26	-0.1
6,298,540	-		PFLU_RS28290	0.26	+0.7
6,298,540	-		PFLU_RS28290	0.26	-0.5
6,298,540	-		PFLU_RS28290	0.26	-0.4
6,298,540	-		PFLU_RS28290	0.26	-1.6
6,298,540	-		PFLU_RS28290	0.26	-1.2
6,298,563	+		PFLU_RS28290	0.31	-0.3
6,298,563	+		PFLU_RS28290	0.31	+0.2
6,298,563	+		PFLU_RS28290	0.31	-0.3
6,298,563	+		PFLU_RS28290	0.31	-0.8
6,298,563	+		PFLU_RS28290	0.31	-0.9
6,298,563	+		PFLU_RS28290	0.31	+0.0
6,298,564	-		PFLU_RS28290	0.31	+1.1
6,298,564	-		PFLU_RS28290	0.31	-0.9
6,298,564	-		PFLU_RS28290	0.31	-0.4
6,298,564	-		PFLU_RS28290	0.31	-1.3
6,298,564	-		PFLU_RS28290	0.31	+0.6
6,298,564	-		PFLU_RS28290	0.31	-0.8
6,298,564	-		PFLU_RS28290	0.31	-1.7
6,298,564	-		PFLU_RS28290	0.31	+0.3
6,298,564	-		PFLU_RS28290	0.31	-1.0
6,298,564	-		PFLU_RS28290	0.31	-0.7
6,298,564	-		PFLU_RS28290	0.31	+0.4
6,298,598	-		PFLU_RS28290	0.39	-1.2
6,298,637	+		PFLU_RS28290	0.47	-2.0
6,298,637	+		PFLU_RS28290	0.47	+0.2
6,298,637	+		PFLU_RS28290	0.47	-0.6
6,298,638	-		PFLU_RS28290	0.48	-0.7
6,298,638	-		PFLU_RS28290	0.48	-1.4
6,298,724	+		PFLU_RS28290	0.66	-2.2
6,298,724	+		PFLU_RS28290	0.66	-0.7
6,298,724	+		PFLU_RS28290	0.66	-0.6
6,298,725	-		PFLU_RS28290	0.67	+0.8
6,298,725	-		PFLU_RS28290	0.67	-1.0
6,298,725	-		PFLU_RS28290	0.67	+0.5
6,298,725	-		PFLU_RS28290	0.67	-0.1
6,298,737	+		PFLU_RS28290	0.69	+1.2
6,298,737	+		PFLU_RS28290	0.69	-0.4
6,298,737	+		PFLU_RS28290	0.69	+0.3
6,298,737	+		PFLU_RS28290	0.69	-1.1
6,298,738	-		PFLU_RS28290	0.70	+1.2
6,298,738	-		PFLU_RS28290	0.70	+0.5
6,298,939	+				+1.2
6,298,939	+				-2.0
6,298,940	-				-0.6
6,298,940	-				+1.9
6,299,346	+				-0.7
6,299,347	-				-1.7
6,299,490	+		PFLU_RS28295	0.11	+0.2
6,299,490	+		PFLU_RS28295	0.11	-1.6
6,299,491	-		PFLU_RS28295	0.11	+0.1
6,299,491	-		PFLU_RS28295	0.11	+0.3
6,299,491	-		PFLU_RS28295	0.11	-0.7
6,299,491	-		PFLU_RS28295	0.11	-0.4
6,299,491	-		PFLU_RS28295	0.11	-1.4
6,299,491	-		PFLU_RS28295	0.11	+0.0
6,299,510	-		PFLU_RS28295	0.11	-1.3
6,299,510	-		PFLU_RS28295	0.11	+0.7
6,299,560	+		PFLU_RS28295	0.12	+0.9
6,299,560	+		PFLU_RS28295	0.12	-0.8
6,299,560	+		PFLU_RS28295	0.12	-1.0
6,299,561	-		PFLU_RS28295	0.12	+1.5
6,299,572	+		PFLU_RS28295	0.12	-2.5
6,299,573	-		PFLU_RS28295	0.12	-0.1
6,299,573	-		PFLU_RS28295	0.12	+1.5
6,299,587	+		PFLU_RS28295	0.12	+1.3
6,299,593	+		PFLU_RS28295	0.12	-1.6
6,299,593	+		PFLU_RS28295	0.12	+0.2
6,299,593	+		PFLU_RS28295	0.12	+0.9
6,299,593	+		PFLU_RS28295	0.12	-2.4
6,299,593	+		PFLU_RS28295	0.12	-0.8
6,299,593	+		PFLU_RS28295	0.12	+0.1
6,299,594	-		PFLU_RS28295	0.12	-0.7
6,299,594	-		PFLU_RS28295	0.12	+0.7
6,299,594	-		PFLU_RS28295	0.12	+0.9
6,299,594	-		PFLU_RS28295	0.12	-1.4
6,299,614	+		PFLU_RS28295	0.13	-0.4
6,299,979	+		PFLU_RS28295	0.19	-0.7
6,299,979	+		PFLU_RS28295	0.19	-1.3
6,300,239	+		PFLU_RS28295	0.24	-2.2
6,300,473	-		PFLU_RS28295	0.28	+1.2
6,300,712	-		PFLU_RS28295	0.32	-0.7
6,300,712	-		PFLU_RS28295	0.32	+0.7
6,300,909	+		PFLU_RS28295	0.35	+0.9
6,300,910	-		PFLU_RS28295	0.35	-1.2
6,300,910	-		PFLU_RS28295	0.35	-0.4
6,300,932	-		PFLU_RS28295	0.35	+2.2
6,301,118	+		PFLU_RS28295	0.39	+1.5
6,301,119	-		PFLU_RS28295	0.39	-0.5
6,301,294	-		PFLU_RS28295	0.42	-1.4
6,301,315	+		PFLU_RS28295	0.42	+0.1
6,301,315	+		PFLU_RS28295	0.42	+1.5
6,301,315	+		PFLU_RS28295	0.42	+0.3
6,301,315	+		PFLU_RS28295	0.42	-1.9
6,301,315	+		PFLU_RS28295	0.42	+1.0
6,301,315	+		PFLU_RS28295	0.42	+0.2
6,301,315	+		PFLU_RS28295	0.42	+0.9
6,301,315	+		PFLU_RS28295	0.42	-0.1
6,301,315	+		PFLU_RS28295	0.42	-0.3
6,301,316	-		PFLU_RS28295	0.42	+0.5
6,301,316	-		PFLU_RS28295	0.42	+0.3
6,301,316	-		PFLU_RS28295	0.42	+1.2
6,301,316	-		PFLU_RS28295	0.42	-1.0
6,301,316	-		PFLU_RS28295	0.42	+0.6
6,301,316	-		PFLU_RS28295	0.42	+0.5
6,301,321	+		PFLU_RS28295	0.42	+1.9
6,301,322	-		PFLU_RS28295	0.42	+0.9
6,301,322	-		PFLU_RS28295	0.42	-0.9
6,301,322	-		PFLU_RS28295	0.42	+0.7
6,301,322	-		PFLU_RS28295	0.42	+0.9
6,301,345	+		PFLU_RS28295	0.43	-0.7
6,301,345	+		PFLU_RS28295	0.43	+0.1
6,301,345	+		PFLU_RS28295	0.43	-1.4
6,301,345	+		PFLU_RS28295	0.43	-0.4
6,301,345	+		PFLU_RS28295	0.43	-1.4
6,301,345	+		PFLU_RS28295	0.43	-0.1
6,301,345	+		PFLU_RS28295	0.43	+0.7
6,301,346	-		PFLU_RS28295	0.43	-1.3
6,301,346	-		PFLU_RS28295	0.43	-0.7
6,301,346	-		PFLU_RS28295	0.43	-0.8
6,301,346	-		PFLU_RS28295	0.43	-0.3
6,301,346	-		PFLU_RS28295	0.43	-2.7
6,301,346	-		PFLU_RS28295	0.43	+0.8
6,301,346	-		PFLU_RS28295	0.43	+0.7
6,301,686	+		PFLU_RS28295	0.48	+0.9
6,301,687	-		PFLU_RS28295	0.48	-0.7
6,301,822	+		PFLU_RS28295	0.51	-1.0
6,301,823	-		PFLU_RS28295	0.51	+0.0
6,301,823	-		PFLU_RS28295	0.51	-2.1
6,302,036	+		PFLU_RS28295	0.54	+0.2
6,302,037	-		PFLU_RS28295	0.54	-3.1
6,302,239	+		PFLU_RS28295	0.58	+0.1
6,302,239	+		PFLU_RS28295	0.58	-0.0
6,302,239	+		PFLU_RS28295	0.58	+0.6
6,302,239	+		PFLU_RS28295	0.58	-0.4
6,302,239	+		PFLU_RS28295	0.58	-0.2
6,302,240	-		PFLU_RS28295	0.58	+0.3
6,302,240	-		PFLU_RS28295	0.58	-0.3
6,302,240	-		PFLU_RS28295	0.58	-1.9
6,302,240	-		PFLU_RS28295	0.58	+0.3
6,302,240	-		PFLU_RS28295	0.58	+0.9
6,302,240	-		PFLU_RS28295	0.58	-0.8
6,302,302	+		PFLU_RS28295	0.59	-0.4
6,302,302	+		PFLU_RS28295	0.59	-0.7
6,302,302	+		PFLU_RS28295	0.59	-1.1
6,302,302	+		PFLU_RS28295	0.59	-1.6
6,302,302	+		PFLU_RS28295	0.59	-1.6
6,302,302	+		PFLU_RS28295	0.59	-1.0
6,302,303	-		PFLU_RS28295	0.59	+1.4
6,302,303	-		PFLU_RS28295	0.59	-0.4
6,302,303	-		PFLU_RS28295	0.59	-2.7
6,302,303	-		PFLU_RS28295	0.59	-0.8
6,302,303	-		PFLU_RS28295	0.59	-0.3
6,302,303	-		PFLU_RS28295	0.59	+1.2
6,302,303	-		PFLU_RS28295	0.59	-1.3
6,302,303	-		PFLU_RS28295	0.59	-1.6
6,302,361	+		PFLU_RS28295	0.60	-2.4
6,302,361	+		PFLU_RS28295	0.60	+0.4
6,302,361	+		PFLU_RS28295	0.60	+0.5
6,302,361	+		PFLU_RS28295	0.60	-0.3
6,302,361	+		PFLU_RS28295	0.60	-0.8
6,302,362	-		PFLU_RS28295	0.60	+2.6
6,302,362	-		PFLU_RS28295	0.60	-0.7
6,302,362	-		PFLU_RS28295	0.60	+0.1
6,302,362	-		PFLU_RS28295	0.60	+0.3
6,302,478	-		PFLU_RS28295	0.62	-1.5
6,302,604	+		PFLU_RS28295	0.64	-1.4
6,302,604	+		PFLU_RS28295	0.64	-0.4
6,302,604	+		PFLU_RS28295	0.64	+1.5
6,302,605	-		PFLU_RS28295	0.64	-0.3
6,302,605	-		PFLU_RS28295	0.64	-0.8
6,302,622	+		PFLU_RS28295	0.64	-1.0
6,302,622	+		PFLU_RS28295	0.64	+2.2
6,302,622	+		PFLU_RS28295	0.64	-1.4
6,302,622	+		PFLU_RS28295	0.64	+0.7
6,302,622	+		PFLU_RS28295	0.64	-1.6
6,302,622	+		PFLU_RS28295	0.64	+0.4
6,302,623	-		PFLU_RS28295	0.65	+0.9
6,302,637	+		PFLU_RS28295	0.65	+0.9
6,302,637	+		PFLU_RS28295	0.65	-0.7
6,302,638	-		PFLU_RS28295	0.65	+0.9
6,302,638	-		PFLU_RS28295	0.65	+0.1
6,302,776	+		PFLU_RS28295	0.67	-0.8
6,302,876	+		PFLU_RS28295	0.69	+0.5
6,303,106	+		PFLU_RS28295	0.73	-1.4
6,303,106	+		PFLU_RS28295	0.73	-0.1
6,303,106	+		PFLU_RS28295	0.73	+1.2
6,303,107	-		PFLU_RS28295	0.73	-1.6
6,303,107	-		PFLU_RS28295	0.73	+2.2
6,303,107	-		PFLU_RS28295	0.73	+2.3
6,303,109	+		PFLU_RS28295	0.73	-1.3
6,303,109	+		PFLU_RS28295	0.73	-1.9
6,303,109	+		PFLU_RS28295	0.73	+0.5
6,303,109	+		PFLU_RS28295	0.73	-1.1
6,303,109	+		PFLU_RS28295	0.73	+0.3
6,303,110	-		PFLU_RS28295	0.73	+2.9
6,303,196	+		PFLU_RS28295	0.74	-0.4
6,303,197	-		PFLU_RS28295	0.74	-0.6
6,303,197	-		PFLU_RS28295	0.74	-0.4
6,303,478	+		PFLU_RS28295	0.79	-0.0
6,303,478	+		PFLU_RS28295	0.79	-0.3
6,303,478	+		PFLU_RS28295	0.79	+0.3
6,303,478	+		PFLU_RS28295	0.79	-0.8
6,303,478	+		PFLU_RS28295	0.79	+0.6
6,303,478	+		PFLU_RS28295	0.79	-2.1
6,303,478	+		PFLU_RS28295	0.79	-0.6
6,303,478	+		PFLU_RS28295	0.79	+0.3
6,303,478	+		PFLU_RS28295	0.79	-2.7
6,303,478	+		PFLU_RS28295	0.79	-0.1
6,303,478	+		PFLU_RS28295	0.79	-1.6
6,303,479	-		PFLU_RS28295	0.79	+0.5
6,303,479	-		PFLU_RS28295	0.79	-1.6
6,303,479	-		PFLU_RS28295	0.79	+0.1
6,303,479	-		PFLU_RS28295	0.79	-0.4
6,303,479	-		PFLU_RS28295	0.79	-0.7
6,303,579	-		PFLU_RS28295	0.81	+0.2
6,303,678	+		PFLU_RS28295	0.83	-2.1
6,303,678	+		PFLU_RS28295	0.83	-0.2
6,303,679	-		PFLU_RS28295	0.83	+0.2
6,303,702	+		PFLU_RS28295	0.83	-0.7
6,303,703	-		PFLU_RS28295	0.83	+0.0
6,303,827	-		PFLU_RS28295	0.85	-2.4
6,303,880	+		PFLU_RS28295	0.86	+0.6
6,303,880	+		PFLU_RS28295	0.86	+0.2
6,303,880	+		PFLU_RS28295	0.86	+0.3
6,303,880	+		PFLU_RS28295	0.86	+2.6
6,303,880	+		PFLU_RS28295	0.86	-0.7
6,303,881	-		PFLU_RS28295	0.86	-2.7
6,303,881	-		PFLU_RS28295	0.86	+0.2
6,303,881	-		PFLU_RS28295	0.86	-0.6
6,303,881	-		PFLU_RS28295	0.86	+1.0
6,303,881	-		PFLU_RS28295	0.86	+1.4
6,303,881	-		PFLU_RS28295	0.86	-2.7
6,303,881	-		PFLU_RS28295	0.86	+1.3
6,303,881	-		PFLU_RS28295	0.86	-0.5
6,303,881	-		PFLU_RS28295	0.86	-0.3
6,304,341	+				+0.3
6,304,342	-				-2.4
6,304,342	-				-0.1
6,304,387	+				-2.0
6,304,387	+				+1.0
6,304,388	-				+1.1
6,304,510	+				-2.4
6,304,511	-				-2.6
6,304,511	-				+0.2
6,304,597	+				+0.3
6,304,597	+				+0.8
6,304,597	+				+0.5
6,304,597	+				-0.1
6,304,597	+				-2.2
6,304,598	-				-0.2
6,304,598	-				-0.1
6,304,598	-				+1.3
6,304,598	-				-0.4
6,304,598	-				+0.7
6,304,598	-				-0.3
6,304,598	-				+1.5
6,304,598	-				+0.6
6,304,669	+				-1.5
6,304,669	+				-1.8
6,304,669	+				-0.7
6,304,670	-				-2.4
6,304,670	-				+0.1
6,304,670	-				-0.7
6,304,670	-				+1.3
6,304,670	-				+0.8
6,304,670	-				+0.7
6,304,670	-				+1.1
6,304,688	+				+0.5
6,304,688	+				+1.4
6,304,688	+				-0.7
6,304,688	+				-0.4
6,304,688	+				+0.2
6,304,688	+				+0.3
6,304,688	+				+1.1
6,304,688	+				+0.9
6,304,688	+				-0.1
6,304,688	+				+0.6
6,304,688	+				-0.5
6,304,688	+				-1.9
6,304,688	+				-1.2
6,304,688	+				-0.7
6,304,688	+				+0.8
6,304,689	-				+0.3
6,304,689	-				+0.9
6,304,689	-				+1.6
6,304,689	-				-0.5
6,304,689	-				-0.7
6,304,689	-				-2.5
6,304,689	-				+0.9
6,304,689	-				+0.8
6,304,689	-				+1.1
6,304,689	-				-0.3
6,304,689	-				+1.2
6,304,689	-				-0.9
6,304,689	-				-2.1
6,304,701	+				+0.5
6,304,701	+				-0.3
6,304,701	+				-2.1
6,304,701	+				+0.1
6,304,702	-				+1.3
6,304,702	-				+0.1
6,304,702	-				+0.4
6,304,743	+				-0.4
6,304,743	+				-0.8
6,304,743	+				+1.2
6,304,743	+				+0.6
6,304,743	+				+0.2
6,304,743	+				+1.6
6,304,743	+				+1.3
6,304,744	-				+2.0
6,304,744	-				+0.4
6,304,744	-				-0.6
6,304,744	-				-1.2
6,304,744	-				+0.1
6,304,744	-				-0.5
6,304,744	-				+0.0
6,304,785	+				+0.1
6,304,785	+				+1.5
6,304,785	+				+0.3
6,304,786	-				-1.6
6,304,826	+				-0.7
6,304,827	-				-1.7
6,304,827	-				-1.5
6,304,997	+				+0.9
6,304,998	-				+1.0
6,304,998	-				+0.2
6,304,998	-				-2.1
6,305,435	+		PFLU_RS28300	0.31	+2.9
6,305,683	+		PFLU_RS28300	0.43	-1.7
6,305,683	+		PFLU_RS28300	0.43	-0.7
6,305,683	+		PFLU_RS28300	0.43	-0.7
6,305,683	+		PFLU_RS28300	0.43	+1.9
6,305,683	+		PFLU_RS28300	0.43	+0.2
6,305,683	+		PFLU_RS28300	0.43	+0.6
6,305,684	-		PFLU_RS28300	0.43	-1.5
6,305,684	-		PFLU_RS28300	0.43	+0.7
6,305,684	-		PFLU_RS28300	0.43	-1.1
6,305,684	-		PFLU_RS28300	0.43	+0.9
6,305,684	-		PFLU_RS28300	0.43	-1.3
6,305,684	-		PFLU_RS28300	0.43	-2.5
6,305,684	-		PFLU_RS28300	0.43	+1.6
6,305,684	-		PFLU_RS28300	0.43	+0.1
6,305,684	-		PFLU_RS28300	0.43	+0.6
6,305,684	-		PFLU_RS28300	0.43	+0.3