Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13380

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,020,656	-				-1.1
3,020,666	+				-1.0
3,020,666	+				+1.9
3,020,673	+				-1.1
3,020,673	+				-1.6
3,020,674	-				+1.8
3,020,674	-				-2.1
3,020,674	-				+0.6
3,020,868	+		PFLU_RS13375	0.19	+0.4
3,020,869	-		PFLU_RS13375	0.19	-1.4
3,020,869	-		PFLU_RS13375	0.19	+0.2
3,020,942	+		PFLU_RS13375	0.27	-0.4
3,020,943	-		PFLU_RS13375	0.27	+1.1
3,020,943	-		PFLU_RS13375	0.27	+1.0
3,021,332	+		PFLU_RS13375	0.68	-0.2
3,021,333	-		PFLU_RS13375	0.68	-1.6
3,021,333	-		PFLU_RS13375	0.68	+0.6
3,021,333	-		PFLU_RS13375	0.68	+1.5
3,021,333	-		PFLU_RS13375	0.68	+0.3
3,021,428	-		PFLU_RS13375	0.78	-0.0
3,021,551	+				+2.2
3,021,551	+				+1.2
3,021,551	+				+0.6
3,021,551	+				-1.1
3,021,551	+				+1.4
3,021,551	+				-1.3
3,021,551	+				+0.2
3,021,552	-				-0.4
3,021,552	-				-1.4
3,021,552	-				-1.0
3,021,552	-				-1.4
3,021,626	+				-2.8
3,021,626	+				+1.2
3,021,626	+				-1.0
3,021,626	+				-0.6
3,021,626	+				+0.5
3,021,626	+				+1.2
3,021,626	+				+0.1
3,021,626	+				+1.9
3,021,626	+				+0.3
3,021,626	+				+0.8
3,021,626	+				+0.5
3,021,627	-				-0.4
3,021,627	-				-0.3
3,021,627	-				+1.0
3,021,627	-				-0.3
3,021,627	-				-2.3
3,021,627	-				-0.0
3,021,627	-				+0.0
3,021,627	-				-1.3
3,021,627	-				+0.3
3,021,630	+				+0.2
3,021,630	+				-0.0
3,021,630	+				+0.6
3,021,630	+				+0.7
3,021,630	+				-0.4
3,021,630	+				+0.1
3,021,630	+				+1.0
3,021,631	-				-0.7
3,021,631	-				-1.3
3,021,631	-				+0.1
3,021,631	-				-1.0
3,021,631	-				-0.2
3,021,631	-				-0.4
3,021,631	-				-0.7
3,021,631	-				+0.5
3,021,669	-				-0.4
3,021,677	+				-0.4
3,021,678	-				-2.1
3,021,678	-				-0.3
3,021,678	-				-0.8
3,021,689	+				+2.2
3,021,690	-				-0.8
3,021,962	+		PFLU_RS13380	0.22	+0.2
3,021,963	-		PFLU_RS13380	0.22	-2.1
3,022,301	+		PFLU_RS13380	0.44	-1.0
3,022,301	+		PFLU_RS13380	0.44	+0.2
3,022,301	+		PFLU_RS13380	0.44	-3.0
3,022,301	+		PFLU_RS13380	0.44	-0.3
3,022,301	+		PFLU_RS13380	0.44	-1.4
3,022,301	+		PFLU_RS13380	0.44	+0.4
3,022,301	+		PFLU_RS13380	0.44	-2.0
3,022,302	-		PFLU_RS13380	0.44	-2.3
3,022,302	-		PFLU_RS13380	0.44	-0.6
3,022,565	+		PFLU_RS13380	0.62	+1.2
3,022,589	+		PFLU_RS13380	0.64	+0.5
3,022,589	+		PFLU_RS13380	0.64	-1.1
3,022,590	-		PFLU_RS13380	0.64	-1.4
3,022,619	+		PFLU_RS13380	0.66	-2.3
3,022,619	+		PFLU_RS13380	0.66	+0.2
3,022,619	+		PFLU_RS13380	0.66	-2.6
3,022,619	+		PFLU_RS13380	0.66	-2.0
3,022,620	-		PFLU_RS13380	0.66	+0.0
3,022,620	-		PFLU_RS13380	0.66	-2.1
3,022,620	-		PFLU_RS13380	0.66	-2.3
3,022,620	-		PFLU_RS13380	0.66	-2.5
3,022,620	-		PFLU_RS13380	0.66	-1.1
3,022,620	-		PFLU_RS13380	0.66	-3.0
3,022,620	-		PFLU_RS13380	0.66	-2.6
3,022,620	-		PFLU_RS13380	0.66	-1.4
3,022,628	+		PFLU_RS13380	0.66	-0.6
3,022,629	-		PFLU_RS13380	0.67	-0.6
3,022,629	-		PFLU_RS13380	0.67	-1.1
3,022,629	-		PFLU_RS13380	0.67	-1.8
3,022,647	+		PFLU_RS13380	0.68	-2.7
3,022,713	-		PFLU_RS13380	0.72	-2.8
3,022,713	-		PFLU_RS13380	0.72	-2.3
3,022,713	-		PFLU_RS13380	0.72	-1.1
3,022,769	+		PFLU_RS13380	0.76	-1.1
3,022,855	+		PFLU_RS13380	0.82	+0.1
3,022,855	+		PFLU_RS13380	0.82	-2.0
3,022,856	-		PFLU_RS13380	0.82	-2.1
3,023,105	+				-0.3
3,023,105	+				-0.4
3,023,105	+				-2.0
3,023,106	-				-1.1
3,023,144	+				-0.6
3,023,144	+				+0.2
3,023,144	+				-3.7
3,023,145	-				-0.7
3,023,145	-				+0.3
3,023,204	+				-1.4
3,023,204	+				-2.1
3,023,204	+				+0.2
3,023,267	+				-1.4
3,023,267	+				-1.1
3,023,267	+				-2.0
3,023,267	+				+0.4
3,023,267	+				-1.8
3,023,268	-				-1.8
3,023,268	-				+0.0
3,023,268	-				+0.9
3,023,268	-				+0.1
3,023,311	-				+1.3
3,023,415	-		PFLU_RS13385	0.14	-0.7
3,023,447	+		PFLU_RS13385	0.16	+2.2
3,023,447	+		PFLU_RS13385	0.16	-0.3
3,023,447	+		PFLU_RS13385	0.16	-1.1
3,023,447	+		PFLU_RS13385	0.16	-0.2
3,023,447	+		PFLU_RS13385	0.16	-1.3
3,023,447	+		PFLU_RS13385	0.16	-1.1
3,023,447	+		PFLU_RS13385	0.16	-1.2
3,023,447	+		PFLU_RS13385	0.16	+0.2
3,023,447	+		PFLU_RS13385	0.16	-1.7
3,023,448	-		PFLU_RS13385	0.17	+1.0
3,023,448	-		PFLU_RS13385	0.17	+1.8
3,023,624	+		PFLU_RS13385	0.28	-2.3
3,023,624	+		PFLU_RS13385	0.28	-1.1
3,023,625	-		PFLU_RS13385	0.28	+2.0
3,023,682	+		PFLU_RS13385	0.32	-0.6
3,023,682	+		PFLU_RS13385	0.32	-0.8
3,023,683	-		PFLU_RS13385	0.32	+1.1
3,023,683	-		PFLU_RS13385	0.32	-0.1
3,023,684	+		PFLU_RS13385	0.32	-1.1
3,023,684	+		PFLU_RS13385	0.32	+1.6
3,023,684	+		PFLU_RS13385	0.32	-0.4
3,023,684	+		PFLU_RS13385	0.32	-1.8
3,023,684	+		PFLU_RS13385	0.32	-1.1
3,023,684	+		PFLU_RS13385	0.32	-0.4
3,023,684	+		PFLU_RS13385	0.32	-1.5
3,023,684	+		PFLU_RS13385	0.32	-1.8
3,023,684	+		PFLU_RS13385	0.32	-2.0
3,023,684	+		PFLU_RS13385	0.32	-2.4
3,023,684	+		PFLU_RS13385	0.32	-0.7
3,023,684	+		PFLU_RS13385	0.32	-0.8
3,023,685	-		PFLU_RS13385	0.33	+0.8
3,023,685	-		PFLU_RS13385	0.33	+0.7
3,023,685	-		PFLU_RS13385	0.33	-1.5
3,023,685	-		PFLU_RS13385	0.33	-1.6
3,023,685	-		PFLU_RS13385	0.33	-0.4
3,023,685	-		PFLU_RS13385	0.33	-2.7
3,023,694	+		PFLU_RS13385	0.33	-1.1
3,023,694	+		PFLU_RS13385	0.33	-1.1
3,023,694	+		PFLU_RS13385	0.33	-0.1
3,023,695	-		PFLU_RS13385	0.33	-0.8
3,023,695	-		PFLU_RS13385	0.33	-1.6
3,023,696	+		PFLU_RS13385	0.33	-1.6
3,023,696	+		PFLU_RS13385	0.33	-0.1
3,023,696	+		PFLU_RS13385	0.33	-0.8
3,023,696	+		PFLU_RS13385	0.33	-1.4
3,023,696	+		PFLU_RS13385	0.33	-1.4
3,023,696	+		PFLU_RS13385	0.33	-1.1
3,023,696	+		PFLU_RS13385	0.33	-1.6
3,023,696	+		PFLU_RS13385	0.33	-2.1
3,023,696	+		PFLU_RS13385	0.33	-1.1
3,023,697	-		PFLU_RS13385	0.33	+1.2
3,023,697	-		PFLU_RS13385	0.33	+0.8
3,023,697	-		PFLU_RS13385	0.33	-1.6
3,023,697	-		PFLU_RS13385	0.33	+1.2
3,023,697	-		PFLU_RS13385	0.33	-0.2
3,023,697	-		PFLU_RS13385	0.33	+0.3
3,023,697	-		PFLU_RS13385	0.33	+0.5
3,023,697	-		PFLU_RS13385	0.33	-1.1
3,023,697	-		PFLU_RS13385	0.33	-0.4
3,023,697	-		PFLU_RS13385	0.33	-0.4
3,023,697	-		PFLU_RS13385	0.33	+2.8
3,023,697	-		PFLU_RS13385	0.33	-0.2
3,023,762	+		PFLU_RS13385	0.38	-2.7
3,023,762	+		PFLU_RS13385	0.38	-1.4
3,023,762	+		PFLU_RS13385	0.38	-2.7
3,023,763	-		PFLU_RS13385	0.38	-0.1
3,023,814	-		PFLU_RS13385	0.41	+0.5