Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11630

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
2,579,118	+		PFLU_RS11625	0.58	+3.8
2,579,138	+		PFLU_RS11625	0.59	+2.8
2,579,138	+		PFLU_RS11625	0.59	+2.4
2,579,138	+		PFLU_RS11625	0.59	+2.4
2,579,138	+		PFLU_RS11625	0.59	+1.9
2,579,138	+		PFLU_RS11625	0.59	+3.0
2,579,138	+		PFLU_RS11625	0.59	+2.2
2,579,138	+		PFLU_RS11625	0.59	+0.9
2,579,138	+		PFLU_RS11625	0.59	+1.9
2,579,138	+		PFLU_RS11625	0.59	+2.7
2,579,139	-		PFLU_RS11625	0.59	+2.6
2,579,139	-		PFLU_RS11625	0.59	+1.0
2,579,139	-		PFLU_RS11625	0.59	+2.0
2,579,139	-		PFLU_RS11625	0.59	+1.4
2,579,139	-		PFLU_RS11625	0.59	+0.2
2,579,152	+		PFLU_RS11625	0.60	+2.2
2,579,152	+		PFLU_RS11625	0.60	+3.0
2,579,153	-		PFLU_RS11625	0.60	+1.5
2,579,153	-		PFLU_RS11625	0.60	+1.4
2,579,337	+		PFLU_RS11625	0.71	+2.7
2,579,337	+		PFLU_RS11625	0.71	+0.4
2,579,337	+		PFLU_RS11625	0.71	+2.7
2,579,338	-		PFLU_RS11625	0.71	+1.5
2,579,338	-		PFLU_RS11625	0.71	+0.8
2,579,425	-		PFLU_RS11625	0.76	+1.9
2,579,869	+				+3.5
2,579,932	+				+2.0
2,579,941	+				+3.0
2,579,965	-				-1.8
2,579,965	-				-0.6
2,579,965	-				-1.2
2,580,007	+				+3.4
2,580,008	-				+0.7
2,580,009	+				+2.1
2,580,010	-				-1.2
2,580,057	+				+0.1
2,580,220	+		PFLU_RS11630	0.14	-0.4
2,580,221	-		PFLU_RS11630	0.14	-3.5
2,580,221	-		PFLU_RS11630	0.14	+1.8
2,580,221	-		PFLU_RS11630	0.14	-2.2
2,580,221	-		PFLU_RS11630	0.14	-2.4
2,580,221	-		PFLU_RS11630	0.14	-0.5
2,580,352	+		PFLU_RS11630	0.24	-0.2
2,580,352	+		PFLU_RS11630	0.24	-2.3
2,580,352	+		PFLU_RS11630	0.24	-2.5
2,580,352	+		PFLU_RS11630	0.24	+1.7
2,580,352	+		PFLU_RS11630	0.24	+1.4
2,580,353	-		PFLU_RS11630	0.24	-1.6
2,580,353	-		PFLU_RS11630	0.24	-1.7
2,580,353	-		PFLU_RS11630	0.24	+0.2
2,580,409	+		PFLU_RS11630	0.28	+0.4
2,580,409	+		PFLU_RS11630	0.28	-0.2
2,580,409	+		PFLU_RS11630	0.28	-1.4
2,580,409	+		PFLU_RS11630	0.28	-1.2
2,580,409	+		PFLU_RS11630	0.28	-0.9
2,580,410	-		PFLU_RS11630	0.28	+1.4
2,580,410	-		PFLU_RS11630	0.28	-2.3
2,580,410	-		PFLU_RS11630	0.28	-0.2
2,580,410	-		PFLU_RS11630	0.28	-1.1
2,580,412	+		PFLU_RS11630	0.28	-0.6
2,580,412	+		PFLU_RS11630	0.28	-1.2
2,580,412	+		PFLU_RS11630	0.28	-1.8
2,580,412	+		PFLU_RS11630	0.28	-2.0
2,580,413	-		PFLU_RS11630	0.28	-0.2
2,580,413	-		PFLU_RS11630	0.28	+1.4
2,580,413	-		PFLU_RS11630	0.28	-1.4
2,580,413	-		PFLU_RS11630	0.28	-0.9
2,580,413	-		PFLU_RS11630	0.28	-0.2
2,580,413	-		PFLU_RS11630	0.28	-1.9
2,580,413	-		PFLU_RS11630	0.28	+1.8
2,580,413	-		PFLU_RS11630	0.28	-0.9
2,580,616	+		PFLU_RS11630	0.44	-2.6
2,580,616	+		PFLU_RS11630	0.44	+2.1
2,580,778	+		PFLU_RS11630	0.56	+1.1
2,580,778	+		PFLU_RS11630	0.56	-0.2
2,580,778	+		PFLU_RS11630	0.56	+0.4
2,580,779	-		PFLU_RS11630	0.56	-2.9
2,580,802	+		PFLU_RS11630	0.58	-2.7
2,580,803	-		PFLU_RS11630	0.58	-0.9
2,580,803	-		PFLU_RS11630	0.58	-0.2
2,580,870	+		PFLU_RS11630	0.63	-2.3
2,580,871	-		PFLU_RS11630	0.63	+0.2
2,580,886	+		PFLU_RS11630	0.64	+1.0
2,580,886	+		PFLU_RS11630	0.64	+1.2
2,580,886	+		PFLU_RS11630	0.64	+1.2
2,580,886	+		PFLU_RS11630	0.64	+0.4
2,580,886	+		PFLU_RS11630	0.64	+0.8
2,580,886	+		PFLU_RS11630	0.64	+0.4
2,580,886	+		PFLU_RS11630	0.64	+0.1
2,580,889	-		PFLU_RS11630	0.64	-1.6
2,580,889	-		PFLU_RS11630	0.64	-0.6
2,580,889	-		PFLU_RS11630	0.64	-0.9
2,580,889	-		PFLU_RS11630	0.64	-1.7
2,580,889	-		PFLU_RS11630	0.64	-1.7
2,580,970	+		PFLU_RS11630	0.71	+4.3
2,580,970	+		PFLU_RS11630	0.71	+3.5
2,580,970	+		PFLU_RS11630	0.71	+1.9
2,580,970	+		PFLU_RS11630	0.71	+3.0
2,580,970	+		PFLU_RS11630	0.71	+2.8
2,580,970	+		PFLU_RS11630	0.71	+2.1
2,580,970	+		PFLU_RS11630	0.71	+2.3
2,580,970	+		PFLU_RS11630	0.71	+3.0
2,580,970	+		PFLU_RS11630	0.71	+2.5
2,580,971	-		PFLU_RS11630	0.71	-1.2
2,580,971	-		PFLU_RS11630	0.71	-2.3
2,580,971	-		PFLU_RS11630	0.71	-1.5
2,580,971	-		PFLU_RS11630	0.71	+0.0
2,580,971	-		PFLU_RS11630	0.71	-0.3
2,580,971	-		PFLU_RS11630	0.71	+0.2
2,580,971	-		PFLU_RS11630	0.71	-0.7
2,580,971	-		PFLU_RS11630	0.71	-1.4
2,580,971	-		PFLU_RS11630	0.71	+0.2
2,581,169	-		PFLU_RS11630	0.86	-1.8
2,581,169	-		PFLU_RS11630	0.86	-1.7
2,581,204	+		PFLU_RS11630	0.88	+2.9
2,581,204	+		PFLU_RS11630	0.88	+3.2
2,581,204	+		PFLU_RS11630	0.88	+4.0
2,581,205	-		PFLU_RS11630	0.88	-1.5
2,581,205	-		PFLU_RS11630	0.88	-1.9
2,581,205	-		PFLU_RS11630	0.88	-0.8
2,581,231	+				+5.5
2,581,231	+				+4.3
2,581,231	+				+5.6
2,581,231	+				+5.5
2,581,231	+				+4.0
2,581,232	-				+0.6
2,581,232	-				-1.6
2,581,283	-				+0.4
2,581,307	+				+3.3
2,581,307	+				+3.5
2,581,307	+				+4.5
2,581,308	-				-0.8
2,581,308	-				-0.9
2,581,308	-				-1.6
2,581,308	-				-2.5
2,581,308	-				-1.3
2,581,308	-				-0.3
2,581,308	-				-1.1
2,581,308	-				+0.4
2,581,308	-				+0.4
2,581,308	-				+0.4
2,581,353	+				+4.6
2,581,353	+				+4.4
2,581,353	+				+5.0
2,581,353	+				+4.9
2,581,353	+				+4.9
2,581,353	+				+3.3
2,581,354	-				-0.1
2,581,354	-				-0.6
2,581,354	-				-0.9
2,581,354	-				-1.4
2,581,354	-				-0.9
2,581,354	-				-0.3
2,581,354	-				+0.7
2,581,354	-				+1.1
2,581,354	-				-0.9
2,581,357	+				+5.1
2,581,358	-				-0.9
2,581,358	-				-0.2
2,581,358	-				+0.6
2,581,358	-				-0.3
2,581,382	+				-2.5
2,581,382	+				-0.2
2,581,382	+				+1.1
2,581,383	-				+0.4
2,581,617	+		PFLU_RS11635	0.24	+0.3
2,581,618	-		PFLU_RS11635	0.25	+1.4
2,581,789	+		PFLU_RS11635	0.42	+0.4
2,581,789	+		PFLU_RS11635	0.42	+0.4
2,581,789	+		PFLU_RS11635	0.42	-1.2
2,581,789	+		PFLU_RS11635	0.42	-2.8
2,581,790	-		PFLU_RS11635	0.42	-0.5
2,581,790	-		PFLU_RS11635	0.42	-1.1
2,581,790	-		PFLU_RS11635	0.42	+0.2
2,581,790	-		PFLU_RS11635	0.42	+0.9
2,581,790	-		PFLU_RS11635	0.42	-0.3
2,581,806	+		PFLU_RS11635	0.44	-0.3
2,581,889	-		PFLU_RS11635	0.52	-0.3
2,581,889	-		PFLU_RS11635	0.52	-0.8
2,581,975	+		PFLU_RS11635	0.61	-0.7
2,581,975	+		PFLU_RS11635	0.61	-0.5
2,581,975	+		PFLU_RS11635	0.61	-2.9
2,581,975	+		PFLU_RS11635	0.61	-0.9
2,581,976	-		PFLU_RS11635	0.61	+0.9
2,581,976	-		PFLU_RS11635	0.61	-0.2
2,581,976	-		PFLU_RS11635	0.61	-1.4
2,581,976	-		PFLU_RS11635	0.61	-2.4
2,581,976	-		PFLU_RS11635	0.61	-0.6
2,581,976	-		PFLU_RS11635	0.61	+0.2
2,581,976	-		PFLU_RS11635	0.61	+0.1
2,581,982	-		PFLU_RS11635	0.61	-2.1
2,581,982	-		PFLU_RS11635	0.61	+1.1
2,581,982	-		PFLU_RS11635	0.61	-1.0
2,581,982	-		PFLU_RS11635	0.61	-2.7
2,581,982	-		PFLU_RS11635	0.61	+1.8
2,582,014	+		PFLU_RS11635	0.65	+2.1
2,582,014	+		PFLU_RS11635	0.65	-0.3
2,582,015	-		PFLU_RS11635	0.65	+0.4
2,582,127	+		PFLU_RS11635	0.76	+0.6
2,582,127	+		PFLU_RS11635	0.76	-0.3
2,582,127	+		PFLU_RS11635	0.76	-0.2
2,582,127	+		PFLU_RS11635	0.76	+2.0
2,582,127	+		PFLU_RS11635	0.76	+0.1
2,582,127	+		PFLU_RS11635	0.76	+1.7
2,582,127	+		PFLU_RS11635	0.76	+1.1
2,582,127	+		PFLU_RS11635	0.76	+1.0
2,582,128	-		PFLU_RS11635	0.76	-1.4
2,582,128	-		PFLU_RS11635	0.76	-0.6
2,582,128	-		PFLU_RS11635	0.76	+0.6
2,582,128	-		PFLU_RS11635	0.76	+0.3
2,582,128	-		PFLU_RS11635	0.76	-0.3
2,582,128	-		PFLU_RS11635	0.76	-0.7
2,582,128	-		PFLU_RS11635	0.76	+0.1
2,582,155	+		PFLU_RS11635	0.79	+1.2
2,582,170	+		PFLU_RS11635	0.80	+0.9
2,582,170	+		PFLU_RS11635	0.80	+1.1
2,582,170	+		PFLU_RS11635	0.80	+0.2
2,582,171	-		PFLU_RS11635	0.80	-0.2
2,582,202	+		PFLU_RS11635	0.84	+2.9
2,582,202	+		PFLU_RS11635	0.84	+0.7
2,582,203	-		PFLU_RS11635	0.84	+0.4
2,582,203	-		PFLU_RS11635	0.84	-0.6
2,582,203	-		PFLU_RS11635	0.84	+2.4
2,582,203	-		PFLU_RS11635	0.84	+1.0
2,582,203	-		PFLU_RS11635	0.84	-2.9
2,582,245	-		PFLU_RS11635	0.88	-1.2
2,582,245	-		PFLU_RS11635	0.88	+1.4
2,582,246	+		PFLU_RS11635	0.88	+2.1
2,582,246	+		PFLU_RS11635	0.88	+1.8
2,582,246	+		PFLU_RS11635	0.88	+0.1
2,582,246	+		PFLU_RS11635	0.88	+0.7
2,582,246	+		PFLU_RS11635	0.88	+1.0
2,582,246	+		PFLU_RS11635	0.88	+0.8
2,582,246	+		PFLU_RS11635	0.88	+0.9
2,582,246	+		PFLU_RS11635	0.88	+1.4
2,582,246	+		PFLU_RS11635	0.88	+0.2
2,582,246	+		PFLU_RS11635	0.88	+1.9
2,582,246	+		PFLU_RS11635	0.88	+0.8
2,582,246	+		PFLU_RS11635	0.88	-0.0
2,582,246	+		PFLU_RS11635	0.88	+1.9
2,582,246	+		PFLU_RS11635	0.88	+2.0
2,582,246	+		PFLU_RS11635	0.88	-0.6
2,582,246	+		PFLU_RS11635	0.88	+1.5
2,582,246	+		PFLU_RS11635	0.88	+1.4
2,582,246	+		PFLU_RS11635	0.88	-0.2
2,582,246	+		PFLU_RS11635	0.88	+3.5
2,582,246	+		PFLU_RS11635	0.88	+0.8
2,582,246	+		PFLU_RS11635	0.88	-1.2
2,582,247	-		PFLU_RS11635	0.88	-1.1
2,582,247	-		PFLU_RS11635	0.88	-0.3
2,582,247	-		PFLU_RS11635	0.88	-2.7
2,582,247	-		PFLU_RS11635	0.88	-1.5
2,582,247	-		PFLU_RS11635	0.88	+1.0
2,582,247	-		PFLU_RS11635	0.88	+0.7
2,582,247	-		PFLU_RS11635	0.88	+0.2
2,582,247	-		PFLU_RS11635	0.88	+1.4
2,582,247	-		PFLU_RS11635	0.88	-0.1
2,582,247	-		PFLU_RS11635	0.88	-0.5
2,582,247	-		PFLU_RS11635	0.88	-1.4
2,582,247	-		PFLU_RS11635	0.88	-0.3
2,582,247	-		PFLU_RS11635	0.88	+1.3
2,582,247	-		PFLU_RS11635	0.88	+0.1
2,582,247	-		PFLU_RS11635	0.88	+0.6
2,582,247	-		PFLU_RS11635	0.88	-0.2
2,582,247	-		PFLU_RS11635	0.88	-1.4
2,582,247	-		PFLU_RS11635	0.88	-0.9
2,582,247	-		PFLU_RS11635	0.88	-2.3
2,582,247	-		PFLU_RS11635	0.88	+1.7
2,582,247	-		PFLU_RS11635	0.88	-2.2
2,582,247	-		PFLU_RS11635	0.88	+2.0
2,582,247	-		PFLU_RS11635	0.88	-1.2
2,582,247	-		PFLU_RS11635	0.88	+0.6
2,582,247	-		PFLU_RS11635	0.88	-1.4
2,582,247	-		PFLU_RS11635	0.88	+0.2
2,582,250	+		PFLU_RS11635	0.88	+4.2
2,582,250	+		PFLU_RS11635	0.88	-1.2
2,582,250	+		PFLU_RS11635	0.88	+2.1