Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21035

Experiment: Parafilmed volatile agar plate with no fungus

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21030 and BWI76_RS21035 are separated by 158 nucleotidesBWI76_RS21035 and BWI76_RS21040 are separated by 81 nucleotides BWI76_RS21030: BWI76_RS21030 - IMP dehydrogenase, at 4,400,678 to 4,402,144 _RS21030 BWI76_RS21035: BWI76_RS21035 - exodeoxyribonuclease VII large subunit, at 4,402,303 to 4,403,676 _RS21035 BWI76_RS21040: BWI76_RS21040 - peptidase M4, at 4,403,758 to 4,404,786 _RS21040 Position (kb) 4402 4403 4404Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 4402.183 kb on + strandat 4402.191 kb on - strandat 4402.243 kb on + strandat 4402.243 kb on + strandat 4402.253 kb on + strandat 4402.253 kb on + strandat 4402.548 kb on - strand, within BWI76_RS21035at 4402.548 kb on - strand, within BWI76_RS21035at 4402.660 kb on + strand, within BWI76_RS21035at 4402.732 kb on - strand, within BWI76_RS21035at 4402.833 kb on + strand, within BWI76_RS21035at 4402.833 kb on + strand, within BWI76_RS21035at 4402.833 kb on + strand, within BWI76_RS21035at 4402.841 kb on - strand, within BWI76_RS21035at 4402.841 kb on - strand, within BWI76_RS21035at 4402.865 kb on + strand, within BWI76_RS21035at 4402.993 kb on - strand, within BWI76_RS21035at 4403.434 kb on + strand, within BWI76_RS21035at 4403.830 kb on - strandat 4403.858 kb on - strandat 4403.978 kb on + strand, within BWI76_RS21040at 4404.006 kb on - strand, within BWI76_RS21040at 4404.042 kb on - strand, within BWI76_RS21040at 4404.267 kb on + strand, within BWI76_RS21040at 4404.390 kb on - strand, within BWI76_RS21040at 4404.450 kb on + strand, within BWI76_RS21040

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Per-strain Table

Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus
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4,402,183 + +0.5
4,402,191 - -3.7
4,402,243 + -0.2
4,402,243 + +0.1
4,402,253 + +0.7
4,402,253 + +0.6
4,402,548 - BWI76_RS21035 0.18 -4.6
4,402,548 - BWI76_RS21035 0.18 -1.9
4,402,660 + BWI76_RS21035 0.26 +0.4
4,402,732 - BWI76_RS21035 0.31 +0.3
4,402,833 + BWI76_RS21035 0.39 +0.3
4,402,833 + BWI76_RS21035 0.39 +4.1
4,402,833 + BWI76_RS21035 0.39 +0.5
4,402,841 - BWI76_RS21035 0.39 -1.0
4,402,841 - BWI76_RS21035 0.39 +1.9
4,402,865 + BWI76_RS21035 0.41 -0.6
4,402,993 - BWI76_RS21035 0.50 +1.4
4,403,434 + BWI76_RS21035 0.82 -3.5
4,403,830 - -0.6
4,403,858 - +1.8
4,403,978 + BWI76_RS21040 0.21 -3.1
4,404,006 - BWI76_RS21040 0.24 +0.5
4,404,042 - BWI76_RS21040 0.28 -1.5
4,404,267 + BWI76_RS21040 0.49 -0.1
4,404,390 - BWI76_RS21040 0.61 -0.2
4,404,450 + BWI76_RS21040 0.67 -0.2

Or see this region's nucleotide sequence