Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05100

Experiment: Taped volatile agar plate with Trichoderma atroviridae IMI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Taped volatile agar plate with Trichoderma atroviridae IMI
1,067,465	+		BWI76_RS05095	0.24	-1.1
1,067,473	-		BWI76_RS05095	0.25	+0.8
1,067,473	-		BWI76_RS05095	0.25	+1.1
1,067,473	-		BWI76_RS05095	0.25	-2.1
1,067,473	-		BWI76_RS05095	0.25	+0.4
1,067,473	-		BWI76_RS05095	0.25	+0.5
1,067,473	-		BWI76_RS05095	0.25	+1.8
1,067,496	+		BWI76_RS05095	0.28	-1.4
1,067,504	-		BWI76_RS05095	0.28	-0.9
1,067,504	-		BWI76_RS05095	0.28	+0.2
1,067,505	-		BWI76_RS05095	0.29	+0.6
1,067,550	+		BWI76_RS05095	0.34	-1.8
1,067,550	+		BWI76_RS05095	0.34	-1.1
1,067,550	+		BWI76_RS05095	0.34	+1.5
1,067,620	+		BWI76_RS05095	0.42	+0.6
1,067,730	-		BWI76_RS05095	0.55	+0.0
1,067,789	+		BWI76_RS05095	0.62	+0.2
1,067,789	+		BWI76_RS05095	0.62	+1.1
1,067,872	+		BWI76_RS05095	0.72	-0.9
1,067,874	+		BWI76_RS05095	0.72	-1.2
1,067,880	-		BWI76_RS05095	0.73	+0.6
1,067,880	-		BWI76_RS05095	0.73	-2.8
1,067,882	+		BWI76_RS05095	0.73	-0.7
1,067,882	+		BWI76_RS05095	0.73	-1.0
1,067,882	+		BWI76_RS05095	0.73	+0.0
1,067,882	+		BWI76_RS05095	0.73	+2.5
1,067,882	-		BWI76_RS05095	0.73	-0.1
1,067,882	-		BWI76_RS05095	0.73	+0.1
1,067,890	-		BWI76_RS05095	0.74	+1.1
1,067,903	+		BWI76_RS05095	0.76	+1.8
1,067,911	-		BWI76_RS05095	0.77	-0.9
1,067,933	+		BWI76_RS05095	0.80	+0.5
1,067,936	-		BWI76_RS05095	0.80	+0.8
1,067,939	-		BWI76_RS05095	0.80	-0.1
1,067,941	-		BWI76_RS05095	0.80	-0.7
1,067,943	+				+0.7
1,067,944	-		BWI76_RS05095	0.81	-0.5
1,067,951	-		BWI76_RS05095	0.82	-0.7
1,067,951	-		BWI76_RS05095	0.82	+1.7
1,067,951	-		BWI76_RS05095	0.82	+0.9
1,067,951	-		BWI76_RS05095	0.82	-2.0
1,067,996	-		BWI76_RS05095	0.87	+0.8
1,068,033	+				+0.6
1,068,041	-				-1.3
1,068,136	+				-1.8
1,068,142	+				+0.8
1,068,143	+				+0.4
1,068,150	-				-1.5
1,068,161	-				+0.4
1,068,161	-				-2.1
1,068,201	+				+0.1
1,068,206	+				-1.4
1,068,206	+				-1.2
1,068,206	+				-0.8
1,068,206	+				-0.5
1,068,209	-				-0.0
1,068,214	-				-1.0
1,068,230	+				-0.9
1,068,272	+				-0.8
1,068,280	-				-0.4
1,068,294	+				+0.8
1,068,294	+				+0.3
1,068,294	+				-1.0
1,068,294	+				-0.1
1,068,294	+				-0.1
1,068,294	+				+0.5
1,068,294	+				+2.0
1,068,294	+				-0.2
1,068,294	+				+0.9
1,068,294	+				-0.4
1,068,294	+				-0.5
1,068,294	+				+0.4
1,068,294	+				+0.2
1,068,299	+				+0.8
1,068,299	+				+1.3
1,068,302	-				+0.4
1,068,302	-				-0.9
1,068,302	-				+0.4
1,068,302	-				-1.1
1,068,302	-				-1.6
1,068,302	-				-2.0
1,068,302	-				+0.0
1,068,302	-				-0.5
1,068,302	-				-0.9
1,068,302	-				-2.7
1,068,302	-				-0.3
1,068,302	-				+4.0
1,068,302	-				-2.5
1,068,302	-				-0.1
1,068,302	-				-1.1
1,068,302	-				+0.5
1,068,302	-				+0.9
1,068,304	-				-3.0
1,068,326	-				+0.3
1,068,326	-				+0.3
1,068,326	-				-2.3
1,068,381	+				-0.3
1,068,381	+				+2.0
1,068,381	+				-0.4
1,068,382	+				-0.5
1,068,383	+				-3.2
1,068,383	+				+0.2
1,068,383	+				+0.5
1,068,383	+				+0.1
1,068,389	-				+0.4
1,068,389	-				-0.6
1,068,390	-				-0.3
1,068,391	-				-1.8
1,068,391	-				+0.7
1,068,406	-				+0.4
1,068,420	-				+0.2
1,068,442	+				+0.9
1,068,442	+				+1.5
1,068,442	+				-0.1
1,068,442	+				-1.8
1,068,442	+				+1.1
1,068,442	+				-0.0
1,068,442	+				-2.6
1,068,442	+				+1.0
1,068,442	+				-3.4
1,068,443	+				+0.3
1,068,450	-				+0.4
1,068,450	-				-1.7
1,068,450	-				-1.8
1,068,451	-				-0.4
1,068,451	-				+0.4
1,068,453	+				-1.0
1,068,463	+				+1.2
1,068,465	+				-1.0
1,068,465	+				-1.5
1,068,465	+				+0.5
1,068,465	+				+1.3
1,068,465	+				-0.9
1,068,465	+				-3.0
1,068,465	+				-0.2
1,068,465	+				-0.7
1,068,465	+				-2.0
1,068,465	+				-2.5
1,068,465	+				-1.2
1,068,465	+				+0.1
1,068,465	+				+0.9
1,068,465	+				+0.6
1,068,472	-				+1.2
1,068,472	-				+1.5
1,068,473	-				+1.7
1,068,473	-				+0.1
1,068,473	-				+1.2
1,068,473	-				+1.3
1,068,473	-				+0.4
1,068,473	-				+0.5
1,068,473	-				-0.9
1,068,473	-				-0.3
1,068,473	-				-0.5
1,068,473	-				-1.8
1,068,473	-				-1.7
1,068,480	+				-0.3
1,068,487	-				-1.0
1,068,492	-				-0.2
1,068,492	-				+2.3
1,068,492	-				+0.1
1,068,493	-				-2.5
1,068,498	-				-1.4
1,068,500	+				-1.2
1,068,513	-				+0.2
1,068,529	+				-0.2
1,068,529	+				-0.3
1,068,529	-				-2.3
1,068,571	+				+0.7
1,068,583	+				+1.8
1,068,594	+				-0.3
1,068,641	+				+0.0
1,068,684	-				+0.1
1,068,756	-				-0.5
1,068,769	+				-0.0
1,068,777	-				-2.5
1,068,870	+		BWI76_RS05100	0.13	+0.6
1,068,964	+		BWI76_RS05100	0.15	-1.0
1,068,997	-		BWI76_RS05100	0.16	+1.0
1,069,241	-		BWI76_RS05100	0.24	-0.4
1,069,317	-		BWI76_RS05100	0.26	+1.6
1,069,344	-		BWI76_RS05100	0.27	-0.1
1,069,371	+		BWI76_RS05100	0.28	-0.0
1,069,371	-		BWI76_RS05100	0.28	+1.5
1,069,527	-		BWI76_RS05100	0.33	+1.5
1,069,620	+		BWI76_RS05100	0.36	+1.4
1,069,646	-		BWI76_RS05100	0.36	-1.1
1,069,651	-		BWI76_RS05100	0.36	-0.8
1,069,797	-		BWI76_RS05100	0.41	+0.2
1,069,859	-		BWI76_RS05100	0.43	+0.5
1,069,894	-		BWI76_RS05100	0.44	+2.1
1,069,988	+				-0.0
1,070,003	+		BWI76_RS05100	0.47	-0.0
1,070,048	+		BWI76_RS05100	0.49	+0.2
1,070,288	+		BWI76_RS05100	0.56	-0.1
1,070,346	-		BWI76_RS05100	0.58	+0.1
1,070,352	-		BWI76_RS05100	0.58	-0.3
1,070,510	-		BWI76_RS05100	0.63	+0.2
1,070,604	+		BWI76_RS05100	0.66	+0.8
1,070,612	-		BWI76_RS05100	0.66	+1.0
1,071,080	-		BWI76_RS05100	0.80	+0.2
1,071,111	+		BWI76_RS05100	0.81	+1.0
1,071,111	+		BWI76_RS05100	0.81	+0.6
1,071,111	+		BWI76_RS05100	0.81	+1.8
1,071,226	+		BWI76_RS05100	0.85	+0.7
1,071,254	-		BWI76_RS05100	0.85	+0.4
1,071,364	-		BWI76_RS05100	0.89	-1.0
1,071,637	-				+0.1
1,071,703	-				-0.0
1,071,891	+		BWI76_RS05105	0.17	-0.9
1,071,891	+		BWI76_RS05105	0.17	+1.0
1,071,904	-		BWI76_RS05105	0.19	-1.0
1,072,107	+		BWI76_RS05105	0.58	-0.3
1,072,107	+		BWI76_RS05105	0.58	+0.5
1,072,110	-		BWI76_RS05105	0.59	-1.6
1,072,115	-		BWI76_RS05105	0.60	+0.9
1,072,122	+		BWI76_RS05105	0.61	-0.2
1,072,122	+		BWI76_RS05105	0.61	+2.2
1,072,122	+		BWI76_RS05105	0.61	-1.5
1,072,123	-		BWI76_RS05105	0.61	+0.8
1,072,130	-		BWI76_RS05105	0.62	+0.4
1,072,170	+		BWI76_RS05105	0.70	-0.8
1,072,170	+		BWI76_RS05105	0.70	-0.3
1,072,170	+		BWI76_RS05105	0.70	+1.4
1,072,170	+		BWI76_RS05105	0.70	+0.9
1,072,170	+		BWI76_RS05105	0.70	+2.8
1,072,170	-		BWI76_RS05105	0.70	+0.5
1,072,172	+		BWI76_RS05105	0.70	-0.4
1,072,172	+		BWI76_RS05105	0.70	+0.7
1,072,172	+		BWI76_RS05105	0.70	+1.0
1,072,172	+		BWI76_RS05105	0.70	-0.6
1,072,178	-		BWI76_RS05105	0.72	+0.1
1,072,178	-		BWI76_RS05105	0.72	+0.9
1,072,178	-		BWI76_RS05105	0.72	+0.2
1,072,178	-		BWI76_RS05105	0.72	-0.3
1,072,178	-		BWI76_RS05105	0.72	-0.1
1,072,180	-		BWI76_RS05105	0.72	+1.3
1,072,222	+		BWI76_RS05105	0.80	-4.1
1,072,230	-		BWI76_RS05105	0.82	-1.8
1,072,237	+		BWI76_RS05105	0.83	-1.8
1,072,237	-		BWI76_RS05105	0.83	-2.0
1,072,252	+		BWI76_RS05105	0.86	+0.7
1,072,267	-		BWI76_RS05105	0.89	-0.2
1,072,273	+		BWI76_RS05105	0.90	+0.6
1,072,281	-				-0.1
1,072,294	-				+0.6
1,072,295	-				+0.2
1,072,300	+				+0.3
1,072,300	+				+0.8
1,072,300	+				+0.4
1,072,300	+				+0.7
1,072,300	+				-1.3
1,072,300	+				+0.7
1,072,300	+				+0.1
1,072,300	+				-0.4
1,072,300	+				-0.0
1,072,308	-				+3.7
1,072,308	-				+0.1
1,072,308	-				-2.0
1,072,308	-				-1.2
1,072,308	-				+1.9
1,072,311	+				-1.2
1,072,321	+				+0.1
1,072,321	+				-0.7
1,072,321	+				-1.0
1,072,321	+				+0.4
1,072,321	+				+0.6
1,072,321	+				-1.4
1,072,329	-				+2.3
1,072,329	-				-0.3
1,072,329	-				-0.3
1,072,365	-				-0.0
1,072,365	-				-0.4
1,072,378	+				+2.3
1,072,398	+		BWI76_RS05110	0.11	-2.3
1,072,412	+		BWI76_RS05110	0.15	-0.1
1,072,423	+		BWI76_RS05110	0.18	-1.3
1,072,431	+		BWI76_RS05110	0.20	-2.4
1,072,431	+		BWI76_RS05110	0.20	+0.6
1,072,431	+		BWI76_RS05110	0.20	-1.4
1,072,431	+		BWI76_RS05110	0.20	-0.7
1,072,436	+		BWI76_RS05110	0.21	+1.2
1,072,436	+		BWI76_RS05110	0.21	-1.5
1,072,439	-		BWI76_RS05110	0.22	+0.6
1,072,439	-		BWI76_RS05110	0.22	-1.9
1,072,439	-		BWI76_RS05110	0.22	+0.3
1,072,439	-		BWI76_RS05110	0.22	-0.4
1,072,439	-		BWI76_RS05110	0.22	-2.5
1,072,448	-		BWI76_RS05110	0.25	+1.5
1,072,467	-		BWI76_RS05110	0.30	+0.8
1,072,469	+		BWI76_RS05110	0.30	-1.0
1,072,472	-		BWI76_RS05110	0.31	+0.4
1,072,474	+		BWI76_RS05110	0.31	-0.1
1,072,477	-		BWI76_RS05110	0.32	-0.4
1,072,505	+		BWI76_RS05110	0.40	-2.5
1,072,523	+		BWI76_RS05110	0.44	+0.6
1,072,536	+		BWI76_RS05110	0.48	-0.2
1,072,536	+		BWI76_RS05110	0.48	-1.2
1,072,536	+		BWI76_RS05110	0.48	+0.2
1,072,546	-		BWI76_RS05110	0.51	-0.7
1,072,561	-		BWI76_RS05110	0.54	-2.5
1,072,564	-		BWI76_RS05110	0.55	+0.4
1,072,566	-		BWI76_RS05110	0.56	-0.5
1,072,569	+		BWI76_RS05110	0.57	-0.3
1,072,575	+		BWI76_RS05110	0.58	-0.4
1,072,577	+		BWI76_RS05110	0.59	-0.5
1,072,611	+		BWI76_RS05110	0.68	-2.6
1,072,621	+		BWI76_RS05110	0.70	-1.2
1,072,621	+				-0.7
1,072,621	+		BWI76_RS05110	0.70	+2.5
1,072,621	+		BWI76_RS05110	0.70	+0.1
1,072,621	+		BWI76_RS05110	0.70	-0.6
1,072,621	+		BWI76_RS05110	0.70	+1.1
1,072,621	+		BWI76_RS05110	0.70	-0.6
1,072,626	+		BWI76_RS05110	0.72	-1.4
1,072,626	+		BWI76_RS05110	0.72	-1.2
1,072,626	+		BWI76_RS05110	0.72	+0.1
1,072,626	+		BWI76_RS05110	0.72	-0.3
1,072,626	+		BWI76_RS05110	0.72	-1.1
1,072,629	-		BWI76_RS05110	0.72	+0.7
1,072,629	-		BWI76_RS05110	0.72	+0.4
1,072,629	-		BWI76_RS05110	0.72	+1.3
1,072,629	-		BWI76_RS05110	0.72	-0.3
1,072,634	-		BWI76_RS05110	0.74	-0.4
1,072,634	-		BWI76_RS05110	0.74	+0.3
1,072,634	-		BWI76_RS05110	0.74	-3.0
1,072,634	-		BWI76_RS05110	0.74	-0.2
1,072,638	-		BWI76_RS05110	0.75	-0.8
1,072,638	-		BWI76_RS05110	0.75	-0.3
1,072,645	+		BWI76_RS05110	0.77	-1.6
1,072,645	+		BWI76_RS05110	0.77	+1.1
1,072,645	+		BWI76_RS05110	0.77	+0.4
1,072,645	+		BWI76_RS05110	0.77	-0.1
1,072,645	+		BWI76_RS05110	0.77	-0.5
1,072,645	+		BWI76_RS05110	0.77	-1.6
1,072,648	-		BWI76_RS05110	0.78	+0.2
1,072,650	+		BWI76_RS05110	0.78	-2.7
1,072,651	+		BWI76_RS05110	0.78	+0.9
1,072,651	+		BWI76_RS05110	0.78	-1.0
1,072,651	+		BWI76_RS05110	0.78	-0.2
1,072,652	+		BWI76_RS05110	0.79	+2.6
1,072,653	-		BWI76_RS05110	0.79	+0.6
1,072,653	-		BWI76_RS05110	0.79	-0.2
1,072,653	-		BWI76_RS05110	0.79	-0.8
1,072,658	-		BWI76_RS05110	0.80	-1.4
1,072,658	-		BWI76_RS05110	0.80	-1.6
1,072,659	+		BWI76_RS05110	0.80	-1.0
1,072,683	+		BWI76_RS05110	0.87	-0.1
1,072,683	+				-1.5
1,072,683	+		BWI76_RS05110	0.87	-1.1
1,072,683	+				-1.9
1,072,683	+		BWI76_RS05110	0.87	+1.0
1,072,691	-		BWI76_RS05110	0.89	-0.2
1,072,691	-		BWI76_RS05110	0.89	-0.0
1,072,691	-		BWI76_RS05110	0.89	-2.5
1,072,691	-		BWI76_RS05110	0.89	-2.6
1,072,691	-		BWI76_RS05110	0.89	+0.1
1,072,691	-		BWI76_RS05110	0.89	-1.3
1,072,691	-		BWI76_RS05110	0.89	-0.4
1,072,691	-		BWI76_RS05110	0.89	-0.9
1,072,691	-		BWI76_RS05110	0.89	-0.4
1,072,691	-		BWI76_RS05110	0.89	+0.0
1,072,691	-		BWI76_RS05110	0.89	+2.1
1,072,691	-		BWI76_RS05110	0.89	-0.5
1,072,691	-		BWI76_RS05110	0.89	-1.5
1,072,691	-		BWI76_RS05110	0.89	-0.1
1,072,691	-		BWI76_RS05110	0.89	+2.3
1,072,693	+		BWI76_RS05110	0.89	-1.9
1,072,698	+				-3.0
1,072,698	+				+0.1
1,072,701	-				-0.7
1,072,701	-				-0.7
1,072,717	+				-0.9