Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5665

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
6,476,210	+		Pf6N2E2_5664	0.43	+1.0
6,476,497	+		Pf6N2E2_5664	0.72	+0.0
6,476,498	-		Pf6N2E2_5664	0.72	+1.0
6,476,532	+		Pf6N2E2_5664	0.76	-0.6
6,476,533	-		Pf6N2E2_5664	0.76	+0.0
6,476,533	-		Pf6N2E2_5664	0.76	+0.0
6,476,533	-		Pf6N2E2_5664	0.76	+0.0
6,476,556	+		Pf6N2E2_5664	0.78	+1.0
6,476,556	+		Pf6N2E2_5664	0.78	+1.0
6,476,556	+		Pf6N2E2_5664	0.78	+1.0
6,476,557	-		Pf6N2E2_5664	0.78	+1.0
6,476,557	-		Pf6N2E2_5664	0.78	+1.0
6,476,559	+		Pf6N2E2_5664	0.78	+1.0
6,476,560	-		Pf6N2E2_5664	0.78	+1.0
6,476,560	-		Pf6N2E2_5664	0.78	+0.0
6,476,802	+				+1.0
6,476,802	+				+1.0
6,476,803	-				+0.0
6,476,976	+				+0.6
6,476,976	+				+1.0
6,476,976	+				+0.7
6,476,976	+				-0.6
6,476,976	+				+1.0
6,476,976	+				+0.0
6,476,976	+				+1.0
6,476,977	-				-0.8
6,476,977	-				-0.6
6,477,034	-				+1.0
6,477,051	-				+1.0
6,477,081	-				+0.0
6,477,081	-				+0.0
6,477,081	-				+0.0
6,477,125	+				+1.4
6,477,125	+				+0.6
6,477,126	-				-6.2
6,477,126	-				-6.7
6,477,126	-				+1.0
6,477,134	+				-2.3
6,477,205	-				+1.0
6,477,242	+				-1.3
6,477,242	+				+0.0
6,477,242	+				+0.0
6,477,242	+				+0.0
6,477,242	+				-1.0
6,477,242	+				+1.0
6,477,242	+				-1.8
6,477,242	+				-5.5
6,477,242	+				-6.1
6,477,242	+				+0.0
6,477,243	-				-1.0
6,477,243	-				-3.5
6,477,243	-				-4.5
6,477,243	-				-4.8
6,477,243	-				-1.3
6,477,243	-				+0.0
6,477,243	-				-0.6
6,477,243	-				-5.0
6,477,243	-				+0.0
6,477,243	-				+0.0
6,477,420	+		Pf6N2E2_5665	0.19	+1.0
6,477,421	-		Pf6N2E2_5665	0.20	+1.0
6,477,421	-		Pf6N2E2_5665	0.20	+1.0
6,477,421	-		Pf6N2E2_5665	0.20	+1.0
6,477,454	+		Pf6N2E2_5665	0.22	-2.2
6,477,454	+		Pf6N2E2_5665	0.22	+0.0
6,477,455	-		Pf6N2E2_5665	0.22	+0.0
6,477,455	-		Pf6N2E2_5665	0.22	+1.0
6,477,575	+		Pf6N2E2_5665	0.32	-2.8
6,477,575	+		Pf6N2E2_5665	0.32	-1.0
6,477,575	+		Pf6N2E2_5665	0.32	-2.2
6,477,598	+		Pf6N2E2_5665	0.34	-5.3
6,477,598	+		Pf6N2E2_5665	0.34	+1.0
6,477,599	-		Pf6N2E2_5665	0.34	-0.6
6,477,614	-		Pf6N2E2_5665	0.35	-8.0
6,477,614	-		Pf6N2E2_5665	0.35	+1.0
6,477,651	-		Pf6N2E2_5665	0.38	+1.0
6,477,676	+		Pf6N2E2_5665	0.40	-0.6
6,477,676	+		Pf6N2E2_5665	0.40	+1.0
6,477,676	+		Pf6N2E2_5665	0.40	+0.0
6,477,676	+		Pf6N2E2_5665	0.40	-4.4
6,477,698	+		Pf6N2E2_5665	0.42	+1.0
6,477,699	-		Pf6N2E2_5665	0.42	+1.0
6,477,699	-		Pf6N2E2_5665	0.42	-2.6
6,477,804	-		Pf6N2E2_5665	0.51	+1.0
6,477,902	+		Pf6N2E2_5665	0.59	-1.6
6,477,902	+		Pf6N2E2_5665	0.59	+1.0
6,477,903	-		Pf6N2E2_5665	0.59	-0.6
6,477,903	-		Pf6N2E2_5665	0.59	+1.0
6,477,903	-		Pf6N2E2_5665	0.59	+1.0
6,477,903	-		Pf6N2E2_5665	0.59	-0.6
6,477,903	-		Pf6N2E2_5665	0.59	+1.0
6,477,903	-		Pf6N2E2_5665	0.59	+1.0
6,477,903	-		Pf6N2E2_5665	0.59	-1.0
6,478,035	-		Pf6N2E2_5665	0.70	+1.0
6,478,167	-		Pf6N2E2_5665	0.81	+1.0
6,478,185	+		Pf6N2E2_5665	0.82	+1.0
6,478,186	-		Pf6N2E2_5665	0.82	+1.0
6,478,400	+				+0.0
6,478,401	-				+1.0
6,478,401	-				+1.0
6,478,401	-				-4.6
6,478,603	+				+0.0
6,478,629	-				+1.0
6,478,662	+				+1.0
6,478,695	+				+0.0
6,478,695	+				+1.0
6,478,696	-				+1.0
6,478,696	-				-2.3
6,478,696	-				+1.0
6,478,826	+		Pf6N2E2_5666	0.17	+0.0
6,478,827	-		Pf6N2E2_5666	0.17	+0.0
6,478,827	-		Pf6N2E2_5666	0.17	+1.0
6,478,913	+		Pf6N2E2_5666	0.26	+0.0
6,478,913	+		Pf6N2E2_5666	0.26	+1.0
6,478,914	-		Pf6N2E2_5666	0.26	+0.0
6,478,914	-		Pf6N2E2_5666	0.26	+0.0
6,479,030	+		Pf6N2E2_5666	0.37	+1.0
6,479,030	+		Pf6N2E2_5666	0.37	+1.0
6,479,030	+		Pf6N2E2_5666	0.37	+1.0
6,479,030	+		Pf6N2E2_5666	0.37	+0.0
6,479,031	-		Pf6N2E2_5666	0.37	+1.0
6,479,031	-		Pf6N2E2_5666	0.37	+1.0
6,479,031	-		Pf6N2E2_5666	0.37	-1.3
6,479,031	-		Pf6N2E2_5666	0.37	+1.0
6,479,217	-		Pf6N2E2_5666	0.55	+1.0
6,479,291	+		Pf6N2E2_5666	0.63	-1.0
6,479,291	+		Pf6N2E2_5666	0.63	+1.0
6,479,291	+		Pf6N2E2_5666	0.63	-4.3
6,479,291	+		Pf6N2E2_5666	0.63	-0.6
6,479,292	-		Pf6N2E2_5666	0.63	-0.6
6,479,295	+		Pf6N2E2_5666	0.63	-3.0
6,479,399	+		Pf6N2E2_5666	0.73	-3.2
6,479,399	+		Pf6N2E2_5666	0.73	-4.5
6,479,399	+		Pf6N2E2_5666	0.73	-3.3
6,479,399	+		Pf6N2E2_5666	0.73	+0.0