Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4495

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
5,227,049	-		Pf6N2E2_4494	0.54	+0.1
5,227,049	-		Pf6N2E2_4494	0.54	+0.1
5,227,064	-		Pf6N2E2_4494	0.55	+0.1
5,227,417	+		Pf6N2E2_4494	0.81	+0.2
5,227,417	+		Pf6N2E2_4494	0.81	+0.1
5,227,418	-		Pf6N2E2_4494	0.81	+1.1
5,227,549	+				-1.3
5,227,549	+				+0.1
5,227,550	-				+1.1
5,227,550	-				-1.5
5,227,739	+		Pf6N2E2_4495	0.34	-1.1
5,227,739	+		Pf6N2E2_4495	0.34	+0.1
5,227,739	+		Pf6N2E2_4495	0.34	+1.1
5,227,739	+		Pf6N2E2_4495	0.34	+1.1
5,227,739	+		Pf6N2E2_4495	0.34	-0.5
5,227,758	-		Pf6N2E2_4495	0.50	-1.2
5,227,796	+		Pf6N2E2_4495	0.82	-0.9
5,227,796	+		Pf6N2E2_4495	0.82	+0.1
5,227,796	+		Pf6N2E2_4495	0.82	-0.9
5,227,796	+		Pf6N2E2_4495	0.82	-0.9
5,227,796	+		Pf6N2E2_4495	0.82	-1.3
5,227,796	+		Pf6N2E2_4495	0.82	+1.1
5,227,796	+		Pf6N2E2_4495	0.82	+0.1
5,227,796	+		Pf6N2E2_4495	0.82	+1.1
5,227,796	+		Pf6N2E2_4495	0.82	-0.8
5,227,796	+				+1.1
5,227,797	-		Pf6N2E2_4495	0.82	+1.1
5,227,797	-		Pf6N2E2_4495	0.82	-0.7
5,227,797	-		Pf6N2E2_4495	0.82	-0.5
5,227,797	-		Pf6N2E2_4495	0.82	-1.9
5,227,797	-		Pf6N2E2_4495	0.82	-0.9
5,227,797	-		Pf6N2E2_4495	0.82	+0.1
5,227,797	-		Pf6N2E2_4495	0.82	+0.1
5,227,815	+				+1.1
5,227,815	+				-1.0
5,227,815	+				+1.1
5,227,816	-				+0.1
5,227,816	-				-0.6
5,228,046	+		Pf6N2E2_4496	0.18	-0.4
5,228,686	+		Pf6N2E2_4496	0.74	+0.1
5,228,686	+		Pf6N2E2_4496	0.74	+1.1
5,228,702	+		Pf6N2E2_4496	0.75	+0.6
5,228,702	+		Pf6N2E2_4496	0.75	+1.1