Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3857

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
4,488,299	+				+1.2
4,488,299	+				+0.2
4,488,300	-				+0.7
4,488,300	-				+0.6
4,488,300	-				+0.2
4,488,300	-				+0.6
4,488,300	-				+1.2
4,488,300	-				+0.3
4,488,300	-				+0.2
4,488,300	-				+1.2
4,488,300	-				+0.4
4,488,300	-				+0.0
4,488,300	-				-0.3
4,488,300	-				+1.2
4,488,313	+				+1.2
4,488,313	+				+0.4
4,488,313	+				+0.8
4,488,313	+				+0.4
4,488,314	-				+0.4
4,488,314	-				-0.4
4,488,314	-				+0.6
4,488,314	-				+1.2
4,488,628	+		Pf6N2E2_3856	0.43	+1.5
4,488,628	+		Pf6N2E2_3856	0.43	+0.5
4,488,629	-		Pf6N2E2_3856	0.43	+1.2
4,488,724	-		Pf6N2E2_3856	0.56	+1.2
4,488,781	+		Pf6N2E2_3856	0.63	+1.2
4,488,782	-		Pf6N2E2_3856	0.63	+0.5
4,488,850	+		Pf6N2E2_3856	0.72	+0.2
4,488,850	+		Pf6N2E2_3856	0.72	+0.9
4,488,851	-		Pf6N2E2_3856	0.72	+1.5
4,488,851	-		Pf6N2E2_3856	0.72	-1.2
4,488,851	-		Pf6N2E2_3856	0.72	+0.6
4,488,851	-		Pf6N2E2_3856	0.72	+1.2
4,488,851	-		Pf6N2E2_3856	0.72	+1.5
4,488,859	+		Pf6N2E2_3856	0.73	+1.9
4,488,859	+		Pf6N2E2_3856	0.73	+1.7
4,488,859	+		Pf6N2E2_3856	0.73	+1.2
4,488,860	-		Pf6N2E2_3856	0.74	+0.5
4,488,893	-		Pf6N2E2_3856	0.78	+0.2
4,489,011	+				-0.4
4,489,012	-				+0.2
4,489,012	-				+0.2
4,489,012	-				+0.2
4,489,015	+				+1.2
4,489,015	+				+0.0
4,489,015	+				+0.6
4,489,016	-				+0.5
4,489,016	-				+0.3
4,489,016	-				+0.3
4,489,017	+				+1.2
4,489,017	+				-0.8
4,489,017	+				+1.2
4,489,036	+				+1.7
4,489,050	+				-0.2
4,489,050	+				+1.2
4,489,054	+				+1.2
4,489,054	+				+0.2
4,489,054	+				-0.8
4,489,054	+				-0.4
4,489,054	+				+0.2
4,489,054	+				-0.4
4,489,054	+				-1.2
4,489,054	+				+0.4
4,489,054	+				-0.8
4,489,054	+				-0.4
4,489,054	+				-0.4
4,489,054	+				+2.2
4,489,055	-				+0.6
4,489,055	-				-0.2
4,489,055	-				+1.3
4,489,055	-				+1.2
4,489,055	-				-0.2
4,489,055	-				+1.2
4,489,055	-				+0.2
4,489,060	+				+0.2
4,489,060	+				+1.2
4,489,061	-				+0.5
4,489,124	-				-0.4
4,489,270	+		Pf6N2E2_3857	0.19	+0.2
4,489,270	+		Pf6N2E2_3857	0.19	+1.2
4,489,300	+		Pf6N2E2_3857	0.23	+0.7
4,489,300	+		Pf6N2E2_3857	0.23	-0.4
4,489,300	+		Pf6N2E2_3857	0.23	+1.2
4,489,301	-		Pf6N2E2_3857	0.23	+0.2
4,489,351	+		Pf6N2E2_3857	0.31	+1.2
4,489,351	+		Pf6N2E2_3857	0.31	+0.2
4,489,351	+		Pf6N2E2_3857	0.31	+1.2
4,489,351	+		Pf6N2E2_3857	0.31	+0.2
4,489,352	-		Pf6N2E2_3857	0.31	+0.3
4,489,352	-		Pf6N2E2_3857	0.31	+1.2
4,489,352	-		Pf6N2E2_3857	0.31	-0.4
4,489,465	+		Pf6N2E2_3857	0.47	-0.2
4,489,726	+		Pf6N2E2_3857	0.84	+0.6
4,489,726	+		Pf6N2E2_3857	0.84	+1.2
4,489,726	+		Pf6N2E2_3857	0.84	+1.2
4,489,726	+		Pf6N2E2_3857	0.84	+0.2
4,489,726	+		Pf6N2E2_3857	0.84	+1.2
4,489,726	+		Pf6N2E2_3857	0.84	-0.8
4,489,726	+		Pf6N2E2_3857	0.84	+1.2
4,489,726	+		Pf6N2E2_3857	0.84	+0.8
4,489,726	+		Pf6N2E2_3857	0.84	+1.2
4,489,726	+		Pf6N2E2_3857	0.84	+0.2
4,489,726	+		Pf6N2E2_3857	0.84	+1.2
4,489,726	+		Pf6N2E2_3857	0.84	+0.5
4,489,726	+		Pf6N2E2_3857	0.84	+0.6
4,489,726	+		Pf6N2E2_3857	0.84	-1.5
4,489,726	+		Pf6N2E2_3857	0.84	-1.5
4,489,727	-		Pf6N2E2_3857	0.85	+0.0
4,489,727	-		Pf6N2E2_3857	0.85	+1.2
4,489,727	-		Pf6N2E2_3857	0.85	+1.2
4,489,727	-		Pf6N2E2_3857	0.85	+0.1
4,489,727	-		Pf6N2E2_3857	0.85	+0.2
4,489,727	-		Pf6N2E2_3857	0.85	+0.4
4,489,727	-		Pf6N2E2_3857	0.85	+1.2
4,489,727	-		Pf6N2E2_3857	0.85	+0.4
4,489,727	-		Pf6N2E2_3857	0.85	+1.2
4,489,727	-		Pf6N2E2_3857	0.85	+1.2
4,489,727	-		Pf6N2E2_3857	0.85	-0.4
4,489,727	-		Pf6N2E2_3857	0.85	+1.2
4,489,727	-		Pf6N2E2_3857	0.85	+0.2
4,489,727	-		Pf6N2E2_3857	0.85	+1.2
4,489,727	-		Pf6N2E2_3857	0.85	+1.2
4,489,727	-		Pf6N2E2_3857	0.85	-0.4
4,489,727	-		Pf6N2E2_3857	0.85	-0.4
4,489,729	-		Pf6N2E2_3857	0.85	+1.2
4,489,729	-		Pf6N2E2_3857	0.85	-1.0
4,489,747	+		Pf6N2E2_3857	0.88	+1.2
4,489,747	+		Pf6N2E2_3857	0.88	+1.2
4,489,748	-		Pf6N2E2_3857	0.88	+0.6
4,489,748	-		Pf6N2E2_3857	0.88	+0.2
4,489,748	-		Pf6N2E2_3857	0.88	+0.2
4,489,748	-		Pf6N2E2_3857	0.88	-0.4
4,489,824	+				-0.8
4,489,989	+		Pf6N2E2_3858	0.23	+0.4
4,489,990	-		Pf6N2E2_3858	0.23	+0.7
4,489,995	+		Pf6N2E2_3858	0.24	+1.2
4,489,995	+		Pf6N2E2_3858	0.24	+0.2
4,489,995	+		Pf6N2E2_3858	0.24	-0.1
4,489,995	+		Pf6N2E2_3858	0.24	+1.2
4,489,995	+		Pf6N2E2_3858	0.24	+1.2
4,489,995	+		Pf6N2E2_3858	0.24	+0.2
4,489,995	+		Pf6N2E2_3858	0.24	+0.2
4,489,995	+		Pf6N2E2_3858	0.24	+1.2
4,489,995	+		Pf6N2E2_3858	0.24	+1.2
4,489,995	+		Pf6N2E2_3858	0.24	+1.2
4,489,996	-		Pf6N2E2_3858	0.24	-0.4
4,489,996	-		Pf6N2E2_3858	0.24	+0.7
4,489,996	-		Pf6N2E2_3858	0.24	+0.2
4,489,996	-		Pf6N2E2_3858	0.24	-0.0
4,489,996	-		Pf6N2E2_3858	0.24	-0.3
4,489,996	-		Pf6N2E2_3858	0.24	-0.3
4,489,996	-		Pf6N2E2_3858	0.24	+0.4
4,489,996	-		Pf6N2E2_3858	0.24	-0.8
4,489,996	-		Pf6N2E2_3858	0.24	+1.2
4,489,996	-		Pf6N2E2_3858	0.24	-0.4
4,489,996	-		Pf6N2E2_3858	0.24	+0.5
4,489,996	-		Pf6N2E2_3858	0.24	+0.2
4,489,996	-		Pf6N2E2_3858	0.24	+0.2
4,489,996	-		Pf6N2E2_3858	0.24	+0.2
4,490,046	+		Pf6N2E2_3858	0.31	+1.2
4,490,046	+		Pf6N2E2_3858	0.31	+0.8
4,490,047	-		Pf6N2E2_3858	0.31	+0.2
4,490,050	-		Pf6N2E2_3858	0.32	+0.1
4,490,050	-		Pf6N2E2_3858	0.32	-0.8
4,490,154	+		Pf6N2E2_3858	0.47	+0.2
4,490,154	+		Pf6N2E2_3858	0.47	+0.2
4,490,154	+		Pf6N2E2_3858	0.47	+0.3
4,490,154	+		Pf6N2E2_3858	0.47	-0.4
4,490,155	-		Pf6N2E2_3858	0.47	-0.4
4,490,155	-		Pf6N2E2_3858	0.47	+1.2
4,490,155	-		Pf6N2E2_3858	0.47	+0.6
4,490,155	-		Pf6N2E2_3858	0.47	+1.2
4,490,253	+		Pf6N2E2_3858	0.61	+1.2
4,490,253	+		Pf6N2E2_3858	0.61	+0.2
4,490,253	+		Pf6N2E2_3858	0.61	-0.9
4,490,253	+		Pf6N2E2_3858	0.61	-0.3
4,490,253	+		Pf6N2E2_3858	0.61	+0.2
4,490,253	+		Pf6N2E2_3858	0.61	-0.4
4,490,254	-		Pf6N2E2_3858	0.61	-0.4
4,490,254	-		Pf6N2E2_3858	0.61	-1.2
4,490,254	-		Pf6N2E2_3858	0.61	-0.8
4,490,254	-		Pf6N2E2_3858	0.61	+0.2
4,490,397	+		Pf6N2E2_3858	0.82	+1.2
4,490,397	+		Pf6N2E2_3858	0.82	-0.2
4,490,398	-		Pf6N2E2_3858	0.82	-0.4
4,490,436	+		Pf6N2E2_3858	0.88	-0.4
4,490,436	+		Pf6N2E2_3858	0.88	-0.8
4,490,436	+		Pf6N2E2_3858	0.88	-0.4
4,490,437	-		Pf6N2E2_3858	0.88	+0.5
4,490,437	-		Pf6N2E2_3858	0.88	+0.3
4,490,437	-		Pf6N2E2_3858	0.88	+1.2
4,490,437	-		Pf6N2E2_3858	0.88	+1.2
4,490,451	+				+2.7
4,490,451	+				+0.7
4,490,452	-				+1.2
4,490,452	-				+0.2
4,490,455	+				+0.3
4,490,455	+				+0.4
4,490,456	-				+1.2
4,490,456	-				+1.2
4,490,456	-				+0.3
4,490,456	-				+0.2
4,490,456	-				+0.1
4,490,456	-				-0.4
4,490,456	-				-0.0
4,490,572	-				+1.2