Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3685

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
4,294,127	+		Pf6N2E2_3684	0.65	-0.8
4,294,127	+		Pf6N2E2_3684	0.65	-0.8
4,294,127	+		Pf6N2E2_3684	0.65	+0.1
4,294,127	+		Pf6N2E2_3684	0.65	-1.4
4,294,128	-		Pf6N2E2_3684	0.65	+0.6
4,294,128	-		Pf6N2E2_3684	0.65	+0.1
4,294,170	-		Pf6N2E2_3684	0.68	+1.1
4,294,229	+		Pf6N2E2_3684	0.72	-0.4
4,294,229	+		Pf6N2E2_3684	0.72	+1.1
4,294,229	+		Pf6N2E2_3684	0.72	-0.8
4,294,230	-		Pf6N2E2_3684	0.72	+1.1
4,294,310	+		Pf6N2E2_3684	0.77	+1.1
4,294,310	+		Pf6N2E2_3684	0.77	-0.0
4,294,310	+		Pf6N2E2_3684	0.77	+1.1
4,294,310	+		Pf6N2E2_3684	0.77	+0.1
4,294,311	-		Pf6N2E2_3684	0.77	-1.1
4,294,389	-		Pf6N2E2_3684	0.83	+1.1
4,294,442	+		Pf6N2E2_3684	0.86	+1.1
4,294,442	+		Pf6N2E2_3684	0.86	-0.4
4,294,442	+		Pf6N2E2_3684	0.86	+1.1
4,294,442	+		Pf6N2E2_3684	0.86	+1.1
4,294,442	+		Pf6N2E2_3684	0.86	-0.9
4,294,443	-		Pf6N2E2_3684	0.86	-0.4
4,294,443	-		Pf6N2E2_3684	0.86	+1.1
4,294,443	-		Pf6N2E2_3684	0.86	+1.1
4,294,443	-		Pf6N2E2_3684	0.86	-0.4
4,294,443	-		Pf6N2E2_3684	0.86	+1.1
4,294,443	-		Pf6N2E2_3684	0.86	-0.9
4,294,527	+				+0.1
4,294,545	-				-0.6
4,294,545	-				-1.2
4,294,545	-				+0.1
4,294,606	-				-0.5
4,294,607	+				+1.1
4,294,607	+				+1.1
4,294,607	+				-1.2
4,294,607	+				+1.1
4,294,607	+				-0.6
4,294,608	-				+0.1
4,294,608	-				+1.1
4,294,608	-				+1.1
4,294,608	-				-0.9
4,294,608	-				-0.4
4,294,608	-				+0.3
4,294,608	-				+0.1
4,294,635	+				-1.0
4,294,635	+				+0.1
4,294,636	-				+1.1
4,294,638	+				+0.1
4,294,638	+				+1.1
4,294,638	+				-0.2
4,294,652	+				+1.1
4,294,671	+				-0.9
4,294,671	+				-0.4
4,294,672	-				+1.1
4,294,672	-				+1.1
4,294,672	-				-0.9
4,294,675	+				-0.8
4,294,675	+				+0.1
4,294,714	+				+0.1
4,294,714	+				+1.1
4,294,741	+				-0.4
4,294,741	+				+1.1
4,294,741	+				+1.1
4,294,742	-				-2.6
4,294,819	+				+0.1
4,294,819	+				-0.5
4,294,820	-				+0.1
4,294,820	-				-0.4
4,294,835	+				+1.1
4,294,836	-				+1.1
4,294,860	+				-0.4
4,294,912	+				+0.1
4,294,935	+				+1.1
4,294,950	+				-1.4
4,294,977	+				-0.4
4,294,978	-				+1.1
4,295,055	+				+1.1
4,295,055	+				+0.1
4,295,056	-				-0.4
4,295,056	-				-0.3
4,295,056	-				+0.1
4,295,085	-				+1.1
4,295,092	-				-0.4
4,295,103	+				-0.4
4,295,109	+				+0.1
4,295,109	+				+1.1
4,295,109	+				+0.1
4,295,109	+				+1.1
4,295,227	+				+1.1
4,295,947	+		Pf6N2E2_3685	0.21	+1.1
4,295,963	+		Pf6N2E2_3685	0.22	+0.1
4,295,963	+		Pf6N2E2_3685	0.22	+1.1
4,295,964	-		Pf6N2E2_3685	0.22	+0.1
4,296,013	+		Pf6N2E2_3685	0.23	+1.1
4,296,064	+		Pf6N2E2_3685	0.24	+1.1
4,296,064	+		Pf6N2E2_3685	0.24	-0.9
4,296,064	+		Pf6N2E2_3685	0.24	+1.1
4,296,112	+		Pf6N2E2_3685	0.25	+1.1
4,296,190	+		Pf6N2E2_3685	0.27	+0.1
4,296,190	+		Pf6N2E2_3685	0.27	-0.9
4,296,191	-		Pf6N2E2_3685	0.27	-0.5
4,296,349	+		Pf6N2E2_3685	0.31	+1.1
4,296,349	+		Pf6N2E2_3685	0.31	-0.2
4,296,350	-		Pf6N2E2_3685	0.31	+0.1
4,296,401	+		Pf6N2E2_3685	0.33	+1.1
4,296,401	+		Pf6N2E2_3685	0.33	-0.7
4,296,413	-		Pf6N2E2_3685	0.33	+1.1
4,296,469	+		Pf6N2E2_3685	0.34	-1.2
4,296,484	+		Pf6N2E2_3685	0.35	+0.1
4,296,500	-		Pf6N2E2_3685	0.35	+0.1
4,296,544	+		Pf6N2E2_3685	0.36	-1.2
4,296,590	-		Pf6N2E2_3685	0.37	+0.1
4,296,590	-		Pf6N2E2_3685	0.37	-0.4
4,296,590	-		Pf6N2E2_3685	0.37	+1.1
4,296,611	-		Pf6N2E2_3685	0.38	+1.1
4,296,665	-		Pf6N2E2_3685	0.39	+1.1
4,296,677	+		Pf6N2E2_3685	0.40	+0.1
4,296,677	+		Pf6N2E2_3685	0.40	+1.1
4,296,678	-		Pf6N2E2_3685	0.40	-1.4
4,296,721	+		Pf6N2E2_3685	0.41	-1.2
4,296,721	+		Pf6N2E2_3685	0.41	-0.8
4,296,721	+		Pf6N2E2_3685	0.41	+1.1
4,296,721	+		Pf6N2E2_3685	0.41	+1.1
4,296,722	-		Pf6N2E2_3685	0.41	+0.6
4,296,758	-		Pf6N2E2_3685	0.42	-0.2
4,296,764	+		Pf6N2E2_3685	0.42	+1.1
4,296,764	+		Pf6N2E2_3685	0.42	-0.4
4,296,810	+		Pf6N2E2_3685	0.43	+1.1
4,296,937	+		Pf6N2E2_3685	0.46	-0.6
4,297,357	+		Pf6N2E2_3685	0.57	-0.1
4,297,360	+		Pf6N2E2_3685	0.57	+1.1
4,297,361	-		Pf6N2E2_3685	0.57	+1.1
4,297,361	-		Pf6N2E2_3685	0.57	+1.1
4,297,703	+		Pf6N2E2_3685	0.66	+1.1
4,297,703	+		Pf6N2E2_3685	0.66	+1.1
4,297,703	+		Pf6N2E2_3685	0.66	+1.1
4,298,253	+		Pf6N2E2_3685	0.79	+1.1
4,298,253	+		Pf6N2E2_3685	0.79	+1.1
4,298,254	-		Pf6N2E2_3685	0.80	+1.1
4,298,311	+		Pf6N2E2_3685	0.81	+1.1
4,298,311	+		Pf6N2E2_3685	0.81	+1.1
4,298,312	-		Pf6N2E2_3685	0.81	-0.9
4,298,407	+		Pf6N2E2_3685	0.83	+0.1
4,298,407	+		Pf6N2E2_3685	0.83	+0.1
4,298,653	+		Pf6N2E2_3685	0.90	+0.1
4,298,653	+		Pf6N2E2_3685	0.90	+0.1
4,298,653	+		Pf6N2E2_3685	0.90	+0.1
4,298,654	-		Pf6N2E2_3685	0.90	+0.1
4,298,654	-		Pf6N2E2_3685	0.90	+0.1
4,298,654	-		Pf6N2E2_3685	0.90	+1.1
4,298,654	-		Pf6N2E2_3685	0.90	+0.1
4,299,170	-				-0.9
4,299,170	-				+0.1
4,299,206	+				+1.1
4,299,233	-				+0.1
4,299,233	-				-0.1
4,299,233	-				+0.1
4,299,271	-				+0.1
4,299,297	-				-0.9
4,299,350	+				+1.1
4,299,351	-				+1.1
4,299,835	+		Pf6N2E2_3686	0.29	+0.1
4,299,991	+		Pf6N2E2_3686	0.38	-0.9
4,300,040	-		Pf6N2E2_3686	0.41	-0.8