Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2960

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
3,450,649	+		Pf6N2E2_2958	0.76	+1.0
3,450,717	+		Pf6N2E2_2958	0.85	+1.4
3,450,717	+		Pf6N2E2_2958	0.85	+1.0
3,450,718	-		Pf6N2E2_2958	0.85	+0.0
3,450,744	+		Pf6N2E2_2958	0.88	-0.6
3,450,745	-		Pf6N2E2_2958	0.89	+1.0
3,450,750	+		Pf6N2E2_2958	0.89	+0.0
3,450,750	+		Pf6N2E2_2958	0.89	+1.0
3,450,750	+		Pf6N2E2_2958	0.89	-1.0
3,450,751	-		Pf6N2E2_2958	0.89	+0.0
3,450,761	+				+0.0
3,450,778	+				+0.2
3,450,821	-				+0.0
3,450,832	+				+0.0
3,450,832	+				+0.0
3,450,833	-				+1.0
3,450,833	-				+1.0
3,450,833	-				+1.0
3,450,991	-		Pf6N2E2_2959	0.13	-0.6
3,450,999	+		Pf6N2E2_2959	0.15	+1.0
3,451,000	-		Pf6N2E2_2959	0.15	-0.3
3,451,000	-		Pf6N2E2_2959	0.15	+0.0
3,451,088	+		Pf6N2E2_2959	0.27	+1.0
3,451,088	+		Pf6N2E2_2959	0.27	-1.0
3,451,088	+		Pf6N2E2_2959	0.27	+1.0
3,451,088	+		Pf6N2E2_2959	0.27	+1.0
3,451,089	-		Pf6N2E2_2959	0.27	+1.0
3,451,142	+		Pf6N2E2_2959	0.34	+0.0
3,451,143	-		Pf6N2E2_2959	0.34	+1.0
3,451,143	-		Pf6N2E2_2959	0.34	-0.6
3,451,194	-		Pf6N2E2_2959	0.41	-1.0
3,451,194	-		Pf6N2E2_2959	0.41	+1.0
3,451,194	-		Pf6N2E2_2959	0.41	+0.5
3,451,244	+		Pf6N2E2_2959	0.48	+1.0
3,451,244	+		Pf6N2E2_2959	0.48	-0.4
3,451,244	+		Pf6N2E2_2959	0.48	+0.0
3,451,244	+		Pf6N2E2_2959	0.48	+0.4
3,451,245	-		Pf6N2E2_2959	0.48	+1.0
3,451,245	-		Pf6N2E2_2959	0.48	-0.7
3,451,253	+		Pf6N2E2_2959	0.49	+1.0
3,451,254	-		Pf6N2E2_2959	0.50	+1.0
3,451,254	-		Pf6N2E2_2959	0.50	-0.6
3,451,496	+		Pf6N2E2_2959	0.83	+1.0
3,451,497	-		Pf6N2E2_2959	0.83	-0.6
3,451,497	-		Pf6N2E2_2959	0.83	+1.0
3,451,508	+		Pf6N2E2_2959	0.84	+1.0
3,451,535	+		Pf6N2E2_2959	0.88	-0.6
3,451,535	+		Pf6N2E2_2959	0.88	+0.0
3,451,535	+		Pf6N2E2_2959	0.88	+0.1
3,451,535	+		Pf6N2E2_2959	0.88	+1.0
3,451,536	-		Pf6N2E2_2959	0.88	+1.0
3,451,639	+				-0.6
3,451,639	+				+1.0
3,451,777	+		Pf6N2E2_2960	0.22	+1.0
3,451,777	+		Pf6N2E2_2960	0.22	+1.0
3,451,777	+		Pf6N2E2_2960	0.22	+0.0
3,451,778	-		Pf6N2E2_2960	0.23	+0.0
3,451,801	+		Pf6N2E2_2960	0.26	-0.6
3,451,801	+		Pf6N2E2_2960	0.26	+0.0
3,451,802	-		Pf6N2E2_2960	0.26	+0.0
3,451,802	-		Pf6N2E2_2960	0.26	+0.0
3,451,802	-		Pf6N2E2_2960	0.26	+0.2
3,451,802	-		Pf6N2E2_2960	0.26	+1.0
3,451,807	+		Pf6N2E2_2960	0.27	+0.0
3,451,807	+		Pf6N2E2_2960	0.27	+1.0
3,451,807	+		Pf6N2E2_2960	0.27	-0.6
3,451,807	+		Pf6N2E2_2960	0.27	-1.7
3,451,808	-		Pf6N2E2_2960	0.27	-0.8
3,451,808	-		Pf6N2E2_2960	0.27	+1.0
3,451,808	-		Pf6N2E2_2960	0.27	+0.0
3,451,808	-		Pf6N2E2_2960	0.27	-0.8
3,451,808	-		Pf6N2E2_2960	0.27	+0.0
3,451,808	-		Pf6N2E2_2960	0.27	-0.1
3,451,831	+		Pf6N2E2_2960	0.30	+0.0
3,451,831	+		Pf6N2E2_2960	0.30	+1.0
3,451,831	+		Pf6N2E2_2960	0.30	+1.0
3,451,831	+		Pf6N2E2_2960	0.30	+1.0
3,451,831	+		Pf6N2E2_2960	0.30	-1.0
3,451,832	-		Pf6N2E2_2960	0.30	-1.3
3,451,832	-		Pf6N2E2_2960	0.30	+0.3
3,451,832	-		Pf6N2E2_2960	0.30	+1.0
3,451,832	-		Pf6N2E2_2960	0.30	-0.8
3,451,832	-		Pf6N2E2_2960	0.30	+0.6
3,451,832	-		Pf6N2E2_2960	0.30	+0.0
3,451,832	-		Pf6N2E2_2960	0.30	+1.0
3,451,832	-		Pf6N2E2_2960	0.30	+0.0
3,451,832	-		Pf6N2E2_2960	0.30	+0.0
3,451,832	-		Pf6N2E2_2960	0.30	+1.0
3,451,852	+		Pf6N2E2_2960	0.33	-0.5
3,451,852	+		Pf6N2E2_2960	0.33	+0.1
3,451,853	-		Pf6N2E2_2960	0.33	+1.0
3,451,853	-		Pf6N2E2_2960	0.33	-0.6
3,451,853	-		Pf6N2E2_2960	0.33	+1.0
3,451,854	+		Pf6N2E2_2960	0.33	-1.0
3,451,864	+		Pf6N2E2_2960	0.35	+0.0
3,451,865	-		Pf6N2E2_2960	0.35	+0.0
3,451,865	-		Pf6N2E2_2960	0.35	+1.0
3,451,865	-		Pf6N2E2_2960	0.35	-0.3
3,451,865	-		Pf6N2E2_2960	0.35	+1.0
3,451,865	-		Pf6N2E2_2960	0.35	-0.6
3,451,865	-		Pf6N2E2_2960	0.35	+0.0
3,451,865	-		Pf6N2E2_2960	0.35	+1.0
3,451,963	+		Pf6N2E2_2960	0.49	+0.0
3,451,964	-		Pf6N2E2_2960	0.49	+1.0
3,451,964	-		Pf6N2E2_2960	0.49	+1.0
3,452,056	+		Pf6N2E2_2960	0.62	+0.0
3,452,056	+		Pf6N2E2_2960	0.62	+1.0
3,452,056	+		Pf6N2E2_2960	0.62	+1.0
3,452,056	+		Pf6N2E2_2960	0.62	+1.0
3,452,057	-		Pf6N2E2_2960	0.62	+1.0
3,452,057	-		Pf6N2E2_2960	0.62	+1.0
3,452,057	-		Pf6N2E2_2960	0.62	-2.7
3,452,062	+		Pf6N2E2_2960	0.62	+1.0
3,452,062	+		Pf6N2E2_2960	0.62	+1.0
3,452,062	+		Pf6N2E2_2960	0.62	+1.0
3,452,062	+		Pf6N2E2_2960	0.62	-0.6
3,452,062	+		Pf6N2E2_2960	0.62	+1.0
3,452,063	-		Pf6N2E2_2960	0.63	+1.0
3,452,063	-		Pf6N2E2_2960	0.63	+1.0
3,452,063	-		Pf6N2E2_2960	0.63	+0.0
3,452,063	-		Pf6N2E2_2960	0.63	+1.0
3,452,063	-		Pf6N2E2_2960	0.63	+0.8
3,452,063	-		Pf6N2E2_2960	0.63	+1.0
3,452,063	-		Pf6N2E2_2960	0.63	+1.0
3,452,063	-		Pf6N2E2_2960	0.63	+1.0
3,452,063	-		Pf6N2E2_2960	0.63	+1.0
3,452,101	+		Pf6N2E2_2960	0.68	-0.6
3,452,104	+		Pf6N2E2_2960	0.68	+0.4
3,452,105	-		Pf6N2E2_2960	0.68	-1.6
3,452,105	-		Pf6N2E2_2960	0.68	+1.0
3,452,245	+		Pf6N2E2_2960	0.88	+1.0
3,452,245	+		Pf6N2E2_2960	0.88	+0.7
3,452,246	-		Pf6N2E2_2960	0.88	-0.6
3,452,246	-		Pf6N2E2_2960	0.88	-0.6
3,452,246	-		Pf6N2E2_2960	0.88	+1.0
3,452,326	+				+1.0
3,452,326	+				-2.0
3,452,455	+				-1.3
3,452,455	+				+1.0
3,452,456	-				-0.5
3,452,456	-				+1.0
3,452,457	+				-1.0
3,452,458	-				-1.1
3,452,890	+		Pf6N2E2_2961	0.48	+1.0
3,452,890	+		Pf6N2E2_2961	0.48	+1.0
3,452,890	+		Pf6N2E2_2961	0.48	+0.0
3,452,890	+		Pf6N2E2_2961	0.48	+0.0
3,452,891	-		Pf6N2E2_2961	0.48	+1.0
3,452,891	-		Pf6N2E2_2961	0.48	+1.0
3,452,891	-		Pf6N2E2_2961	0.48	-1.0
3,452,891	-		Pf6N2E2_2961	0.48	+1.0
3,452,891	-		Pf6N2E2_2961	0.48	-0.8
3,452,936	-		Pf6N2E2_2961	0.52	+0.1
3,452,936	-		Pf6N2E2_2961	0.52	+0.0
3,453,145	+		Pf6N2E2_2961	0.71	+1.0
3,453,265	+		Pf6N2E2_2961	0.81	+1.0
3,453,265	+		Pf6N2E2_2961	0.81	+1.0
3,453,266	-		Pf6N2E2_2961	0.81	-0.7
3,453,286	+		Pf6N2E2_2961	0.83	-1.4
3,453,286	+		Pf6N2E2_2961	0.83	+0.0