Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2906

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
3,396,551	-		Pf6N2E2_2905	0.61	+1.0
3,396,917	+		Pf6N2E2_2905	0.88	-1.3
3,396,918	-		Pf6N2E2_2905	0.88	-1.0
3,397,159	+				+0.0
3,397,159	+				+1.0
3,397,160	-				+1.0
3,397,286	+				-0.8
3,397,286	+				+1.0
3,397,287	-				+0.0
3,397,287	-				+0.8
3,397,287	-				+1.0
3,397,287	-				-0.6
3,397,287	-				+1.0
3,397,287	-				+0.0
3,397,296	-				+1.0
3,397,296	-				-0.5
3,397,412	+		Pf6N2E2_2906	0.10	-1.0
3,397,412	+		Pf6N2E2_2906	0.10	+0.0
3,397,412	+		Pf6N2E2_2906	0.10	+1.0
3,397,413	-		Pf6N2E2_2906	0.10	+1.0
3,397,413	-		Pf6N2E2_2906	0.10	+1.0
3,397,436	+		Pf6N2E2_2906	0.12	+1.0
3,397,436	+		Pf6N2E2_2906	0.12	+1.0
3,397,436	+		Pf6N2E2_2906	0.12	+0.0
3,397,437	-		Pf6N2E2_2906	0.12	+1.0
3,397,454	+		Pf6N2E2_2906	0.13	+1.0
3,397,455	-		Pf6N2E2_2906	0.13	+0.0
3,397,455	-		Pf6N2E2_2906	0.13	+0.0
3,397,472	+		Pf6N2E2_2906	0.15	+1.0
3,397,473	-		Pf6N2E2_2906	0.15	-1.3
3,397,532	+		Pf6N2E2_2906	0.19	+1.0
3,397,532	+		Pf6N2E2_2906	0.19	-0.6
3,397,532	+		Pf6N2E2_2906	0.19	-2.1
3,397,532	+		Pf6N2E2_2906	0.19	-0.6
3,397,533	-		Pf6N2E2_2906	0.19	-0.6
3,397,566	-		Pf6N2E2_2906	0.21	-0.2
3,397,583	+		Pf6N2E2_2906	0.22	+0.0
3,397,584	-		Pf6N2E2_2906	0.22	+0.0
3,397,584	-		Pf6N2E2_2906	0.22	-0.9
3,397,584	-		Pf6N2E2_2906	0.22	-0.6
3,397,613	+		Pf6N2E2_2906	0.24	+0.0
3,397,613	+		Pf6N2E2_2906	0.24	+0.0
3,397,613	+		Pf6N2E2_2906	0.24	+1.0
3,397,614	-		Pf6N2E2_2906	0.25	+1.0
3,397,614	-		Pf6N2E2_2906	0.25	+1.0
3,397,628	+		Pf6N2E2_2906	0.25	+0.0
3,397,628	+		Pf6N2E2_2906	0.25	+1.0
3,397,628	+		Pf6N2E2_2906	0.25	-1.0
3,397,628	+		Pf6N2E2_2906	0.25	+1.0
3,397,629	-		Pf6N2E2_2906	0.26	+0.0
3,397,629	-		Pf6N2E2_2906	0.26	+0.0
3,397,629	-		Pf6N2E2_2906	0.26	-0.3
3,397,629	-		Pf6N2E2_2906	0.26	+1.0
3,397,629	-		Pf6N2E2_2906	0.26	+1.0
3,398,002	+		Pf6N2E2_2906	0.52	+1.0
3,398,002	+		Pf6N2E2_2906	0.52	-1.0
3,398,002	+		Pf6N2E2_2906	0.52	-0.7
3,398,003	-		Pf6N2E2_2906	0.52	-0.8
3,398,003	-		Pf6N2E2_2906	0.52	+0.0
3,398,033	+		Pf6N2E2_2906	0.54	-1.1
3,398,033	+		Pf6N2E2_2906	0.54	-0.3
3,398,034	-		Pf6N2E2_2906	0.54	-0.9
3,398,034	-		Pf6N2E2_2906	0.54	+1.0
3,398,139	+		Pf6N2E2_2906	0.61	-1.0
3,398,227	+		Pf6N2E2_2906	0.67	+1.0
3,398,228	-		Pf6N2E2_2906	0.68	+1.0
3,398,228	-		Pf6N2E2_2906	0.68	+1.0
3,398,228	-		Pf6N2E2_2906	0.68	+1.0
3,398,349	-		Pf6N2E2_2906	0.76	+0.0
3,398,349	-		Pf6N2E2_2906	0.76	+1.0
3,398,358	+		Pf6N2E2_2906	0.77	+1.0
3,398,359	-		Pf6N2E2_2906	0.77	-1.8
3,398,359	-		Pf6N2E2_2906	0.77	+0.0
3,398,379	-		Pf6N2E2_2906	0.78	-0.1
3,398,436	+		Pf6N2E2_2906	0.82	-0.7
3,398,436	+		Pf6N2E2_2906	0.82	-1.3
3,398,437	-		Pf6N2E2_2906	0.82	+1.0
3,398,437	-		Pf6N2E2_2906	0.82	+1.0
3,398,438	+		Pf6N2E2_2906	0.82	-0.8
3,398,438	+		Pf6N2E2_2906	0.82	-1.2
3,398,438	+		Pf6N2E2_2906	0.82	-0.8
3,398,438	+		Pf6N2E2_2906	0.82	+0.0
3,398,438	+		Pf6N2E2_2906	0.82	-2.0
3,398,438	+		Pf6N2E2_2906	0.82	+1.0
3,398,438	+		Pf6N2E2_2906	0.82	-0.6
3,398,438	+		Pf6N2E2_2906	0.82	-1.3
3,398,438	+		Pf6N2E2_2906	0.82	-0.1
3,398,438	+		Pf6N2E2_2906	0.82	-0.6
3,398,438	+		Pf6N2E2_2906	0.82	-0.6
3,398,438	+		Pf6N2E2_2906	0.82	+1.0
3,398,438	+		Pf6N2E2_2906	0.82	-0.7
3,398,438	+		Pf6N2E2_2906	0.82	+1.0
3,398,438	+		Pf6N2E2_2906	0.82	-0.6
3,398,439	-		Pf6N2E2_2906	0.82	+1.0
3,398,439	-		Pf6N2E2_2906	0.82	-1.6
3,398,439	-		Pf6N2E2_2906	0.82	-0.9
3,398,439	-		Pf6N2E2_2906	0.82	-0.7
3,398,439	-		Pf6N2E2_2906	0.82	-0.7
3,398,439	-		Pf6N2E2_2906	0.82	-0.6
3,398,439	-		Pf6N2E2_2906	0.82	+0.0
3,398,439	-		Pf6N2E2_2906	0.82	+1.0
3,398,463	-		Pf6N2E2_2906	0.84	+1.0
3,398,463	-		Pf6N2E2_2906	0.84	-0.7
3,398,469	-		Pf6N2E2_2906	0.84	-0.6
3,398,469	-		Pf6N2E2_2906	0.84	+0.0
3,398,469	-		Pf6N2E2_2906	0.84	+1.0
3,398,705	+				-0.5
3,398,706	-				+1.0
3,398,710	+				+1.0
3,398,711	-				+1.0
3,398,714	+				-2.3
3,398,715	-				+0.0
3,398,715	-				-1.4
3,398,770	+				-0.8
3,398,770	+				-0.4
3,398,770	+				-0.3
3,398,771	-				-0.4
3,398,771	-				-1.1
3,398,771	-				+0.0
3,398,797	+				-1.8
3,398,802	-				+1.0
3,398,826	+				-0.8
3,398,852	+				+0.3
3,398,977	+				-1.1
3,398,978	-				+1.0
3,399,027	+				-0.1
3,399,049	-				+1.0
3,399,117	-				+1.0
3,399,117	-				+0.0
3,399,310	+		Pf6N2E2_2907	0.16	-0.6
3,399,310	+		Pf6N2E2_2907	0.16	+1.0
3,399,310	+		Pf6N2E2_2907	0.16	+1.0
3,399,310	+		Pf6N2E2_2907	0.16	+1.0
3,399,310	+		Pf6N2E2_2907	0.16	-0.6
3,399,311	-		Pf6N2E2_2907	0.16	-1.0
3,399,311	-		Pf6N2E2_2907	0.16	+0.0
3,399,311	-		Pf6N2E2_2907	0.16	+1.0
3,399,311	-		Pf6N2E2_2907	0.16	-0.6
3,399,311	-		Pf6N2E2_2907	0.16	+0.0
3,399,316	+		Pf6N2E2_2907	0.16	+1.0
3,399,340	+		Pf6N2E2_2907	0.18	-2.3
3,399,340	+		Pf6N2E2_2907	0.18	-1.7
3,399,340	+		Pf6N2E2_2907	0.18	+1.0
3,399,341	-		Pf6N2E2_2907	0.18	+1.0
3,399,341	-		Pf6N2E2_2907	0.18	+0.0
3,399,341	-		Pf6N2E2_2907	0.18	-1.5
3,399,341	-		Pf6N2E2_2907	0.18	+1.0
3,399,341	-		Pf6N2E2_2907	0.18	+0.0
3,399,368	-		Pf6N2E2_2907	0.20	+0.0
3,399,420	+		Pf6N2E2_2907	0.23	+1.0
3,399,430	+		Pf6N2E2_2907	0.24	+1.0
3,399,456	+		Pf6N2E2_2907	0.26	+1.0
3,399,456	+		Pf6N2E2_2907	0.26	+1.0
3,399,456	+		Pf6N2E2_2907	0.26	+1.0
3,399,456	+		Pf6N2E2_2907	0.26	+1.0
3,399,456	+		Pf6N2E2_2907	0.26	-0.6
3,399,457	-		Pf6N2E2_2907	0.26	+0.0
3,399,457	-		Pf6N2E2_2907	0.26	-1.0
3,399,457	-		Pf6N2E2_2907	0.26	+1.0
3,399,457	-		Pf6N2E2_2907	0.26	-0.9
3,399,459	+		Pf6N2E2_2907	0.26	+1.0
3,399,460	-		Pf6N2E2_2907	0.26	-1.7
3,399,584	+		Pf6N2E2_2907	0.35	+0.0
3,399,584	+		Pf6N2E2_2907	0.35	+0.0
3,399,585	-		Pf6N2E2_2907	0.35	+1.0
3,399,585	-		Pf6N2E2_2907	0.35	+1.0
3,399,585	-		Pf6N2E2_2907	0.35	+1.0
3,399,606	-		Pf6N2E2_2907	0.36	-0.9
3,399,625	-		Pf6N2E2_2907	0.38	+0.0
3,399,639	+		Pf6N2E2_2907	0.39	+0.0