Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2409

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,859,713	+		Pf6N2E2_2408	0.61	-1.4
2,859,713	+		Pf6N2E2_2408	0.61	+1.0
2,859,714	-		Pf6N2E2_2408	0.62	-0.0
2,859,714	-		Pf6N2E2_2408	0.62	-0.9
2,860,136	+		Pf6N2E2_2408	0.85	-1.3
2,860,137	-		Pf6N2E2_2408	0.85	+1.0
2,860,232	+				-0.0
2,860,233	-				-1.7
2,860,233	-				-0.0
2,860,874	-		Pf6N2E2_2409	0.18	-0.6
2,860,951	+		Pf6N2E2_2409	0.23	+0.6
2,860,951	+		Pf6N2E2_2409	0.23	+1.0
2,860,951	+		Pf6N2E2_2409	0.23	-0.0
2,860,951	+		Pf6N2E2_2409	0.23	-2.4
2,860,951	+		Pf6N2E2_2409	0.23	+1.0
2,860,951	+				-1.2
2,860,952	-		Pf6N2E2_2409	0.23	+1.0
2,860,952	-		Pf6N2E2_2409	0.23	+0.5
2,860,952	-		Pf6N2E2_2409	0.23	-0.0
2,860,952	-		Pf6N2E2_2409	0.23	+1.0
2,861,038	+		Pf6N2E2_2409	0.28	-0.9
2,861,039	-		Pf6N2E2_2409	0.28	+1.0
2,861,052	-		Pf6N2E2_2409	0.29	+1.0
2,861,052	-		Pf6N2E2_2409	0.29	-0.7
2,861,052	-		Pf6N2E2_2409	0.29	-0.9
2,861,156	-		Pf6N2E2_2409	0.36	-0.1
2,861,314	+		Pf6N2E2_2409	0.45	+1.0
2,861,314	+		Pf6N2E2_2409	0.45	-0.2
2,861,315	-		Pf6N2E2_2409	0.46	+1.0
2,861,429	-		Pf6N2E2_2409	0.53	+1.0
2,861,444	+		Pf6N2E2_2409	0.53	-0.0
2,861,444	+		Pf6N2E2_2409	0.53	-2.3
2,861,479	+		Pf6N2E2_2409	0.56	+1.0
2,861,480	-		Pf6N2E2_2409	0.56	+1.0
2,861,480	-		Pf6N2E2_2409	0.56	+1.0
2,861,480	-		Pf6N2E2_2409	0.56	-0.8
2,861,842	+		Pf6N2E2_2409	0.78	-0.6
2,861,842	+		Pf6N2E2_2409	0.78	+1.0
2,861,842	+		Pf6N2E2_2409	0.78	-0.3
2,862,056	-				+1.0
2,862,121	+				+1.0
2,862,301	+				-1.6
2,862,302	-				+1.0
2,862,302	-				-0.6
2,862,421	+		Pf6N2E2_2410	0.17	-0.9
2,862,422	-		Pf6N2E2_2410	0.17	-0.0
2,862,422	-		Pf6N2E2_2410	0.17	-1.4
2,862,422	-		Pf6N2E2_2410	0.17	-0.7
2,862,422	-		Pf6N2E2_2410	0.17	-0.8
2,862,427	+		Pf6N2E2_2410	0.17	+1.0
2,862,427	+		Pf6N2E2_2410	0.17	+1.0
2,862,428	-		Pf6N2E2_2410	0.17	+1.0
2,862,670	+		Pf6N2E2_2410	0.38	+1.0
2,862,670	+		Pf6N2E2_2410	0.38	+1.0
2,862,670	+		Pf6N2E2_2410	0.38	+1.0
2,862,671	-		Pf6N2E2_2410	0.38	-0.0
2,862,671	-		Pf6N2E2_2410	0.38	+1.0
2,862,671	-		Pf6N2E2_2410	0.38	+1.0
2,862,671	-		Pf6N2E2_2410	0.38	-0.5
2,862,671	-		Pf6N2E2_2410	0.38	-0.0
2,862,741	+		Pf6N2E2_2410	0.44	+1.0
2,862,742	-		Pf6N2E2_2410	0.44	+1.0
2,862,742	-		Pf6N2E2_2410	0.44	-0.8
2,862,742	-		Pf6N2E2_2410	0.44	-0.0
2,863,018	+		Pf6N2E2_2410	0.68	-0.6
2,863,019	-		Pf6N2E2_2410	0.68	+1.0
2,863,144	+		Pf6N2E2_2410	0.79	-1.1
2,863,145	-		Pf6N2E2_2410	0.79	-1.9
2,863,145	-		Pf6N2E2_2410	0.79	-0.0
2,863,145	-		Pf6N2E2_2410	0.79	-0.0
2,863,145	-		Pf6N2E2_2410	0.79	-0.4