Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5074

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
5,848,997	-		Pf6N2E2_5072	0.65	+0.1
5,849,009	-		Pf6N2E2_5072	0.67	+1.1
5,849,260	+				+0.1
5,849,261	-				+1.1
5,849,266	+				-0.8
5,849,266	+				+1.1
5,849,266	+				+0.1
5,849,267	-				+1.1
5,849,267	-				+1.1
5,849,475	-		Pf6N2E2_5073	0.45	+0.1
5,849,475	-		Pf6N2E2_5073	0.45	-2.3
5,849,480	-		Pf6N2E2_5073	0.46	+1.1
5,849,487	+		Pf6N2E2_5073	0.48	+1.1
5,849,487	+		Pf6N2E2_5073	0.48	+0.1
5,849,691	+				+1.1
5,849,691	+				-0.4
5,849,692	-				+0.1
5,849,692	-				+0.1
5,849,692	-				-0.5
5,849,707	+				+0.1
5,849,708	-				-0.9
5,849,708	-				+1.1
5,849,708	-				-0.8
5,849,708	-				-1.0
5,849,717	-				+0.5
5,849,742	+				+1.1
5,849,743	-				+1.1
5,849,743	-				-0.8
5,849,743	-				+1.1
5,849,743	-				+0.2
5,849,779	+				+1.1
5,849,780	-				+1.1
5,849,780	-				-0.5
5,849,780	-				-1.4
5,849,793	+				+1.1
5,849,794	-				+1.1
5,849,794	-				-0.5
5,849,794	-				-0.4
5,849,905	+				-0.7
5,849,906	-				+0.1
5,849,909	+				+1.1
5,849,910	-				+0.1
5,849,910	-				-1.1
5,849,931	+				-0.5
5,849,932	-				-1.2
5,849,962	+				+1.1
5,849,962	+				+0.1
5,849,962	+				+1.1
5,849,962	+				+1.1
5,849,962	+				-0.5
5,849,962	+				+0.1
5,849,963	-				-0.3
5,849,963	-				+0.5
5,849,964	+				-1.3
5,849,965	-				-0.9
5,849,965	-				+1.1
5,849,965	-				+1.1
5,849,965	-				+0.1
5,849,965	-				+0.4
5,849,984	+				+1.1
5,849,984	+				+1.1
5,849,984	+				+0.1
5,849,985	-				-0.3
5,849,985	-				+1.1
5,849,985	-				-0.5
5,849,985	-				-0.9
5,849,985	-				+0.1
5,849,985	-				+1.1
5,850,012	+				+1.1
5,850,012	+				+0.1
5,850,012	+				+1.1
5,850,012	+				-0.7
5,850,597	+		Pf6N2E2_5074	0.40	+1.1
5,850,597	+		Pf6N2E2_5074	0.40	+1.1
5,850,649	+		Pf6N2E2_5074	0.43	+0.1
5,850,649	+		Pf6N2E2_5074	0.43	-0.8
5,850,649	+		Pf6N2E2_5074	0.43	+0.1
5,850,649	+		Pf6N2E2_5074	0.43	+0.1
5,850,649	+		Pf6N2E2_5074	0.43	+0.5
5,850,649	+		Pf6N2E2_5074	0.43	-0.9
5,850,650	-		Pf6N2E2_5074	0.43	+0.1
5,850,650	-		Pf6N2E2_5074	0.43	+0.3
5,850,650	-		Pf6N2E2_5074	0.43	+1.1
5,850,657	+		Pf6N2E2_5074	0.44	+1.1
5,850,657	+		Pf6N2E2_5074	0.44	+0.1
5,850,657	+		Pf6N2E2_5074	0.44	+1.1
5,850,658	-		Pf6N2E2_5074	0.44	+0.1
5,850,658	-		Pf6N2E2_5074	0.44	+1.1
5,850,658	-		Pf6N2E2_5074	0.44	-0.3
5,850,658	-		Pf6N2E2_5074	0.44	-0.3
5,850,690	+		Pf6N2E2_5074	0.46	-0.3
5,850,771	+		Pf6N2E2_5074	0.51	+0.1
5,850,771	+		Pf6N2E2_5074	0.51	+0.1
5,850,779	+		Pf6N2E2_5074	0.51	-0.9
5,850,779	+		Pf6N2E2_5074	0.51	+1.1
5,850,803	+		Pf6N2E2_5074	0.53	+0.1
5,850,803	+		Pf6N2E2_5074	0.53	-0.2
5,850,803	+		Pf6N2E2_5074	0.53	-2.3
5,850,804	-		Pf6N2E2_5074	0.53	+0.1
5,850,804	-		Pf6N2E2_5074	0.53	+1.1
5,850,804	-		Pf6N2E2_5074	0.53	+1.1
5,850,806	+		Pf6N2E2_5074	0.53	-0.6
5,850,806	+		Pf6N2E2_5074	0.53	-0.9
5,850,807	-		Pf6N2E2_5074	0.53	-2.4
5,850,807	-		Pf6N2E2_5074	0.53	+0.1
5,850,807	-		Pf6N2E2_5074	0.53	+0.1
5,850,809	+		Pf6N2E2_5074	0.53	-0.4
5,850,810	-		Pf6N2E2_5074	0.54	+1.1
5,850,810	-		Pf6N2E2_5074	0.54	-0.9
5,850,837	+		Pf6N2E2_5074	0.55	-0.7
5,850,837	+		Pf6N2E2_5074	0.55	+1.1
5,850,837	+		Pf6N2E2_5074	0.55	-0.5
5,850,837	+		Pf6N2E2_5074	0.55	-0.9
5,850,837	+		Pf6N2E2_5074	0.55	-1.3
5,850,838	-		Pf6N2E2_5074	0.55	+1.1
5,850,838	-		Pf6N2E2_5074	0.55	+1.1
5,850,838	-		Pf6N2E2_5074	0.55	+1.1
5,850,838	-		Pf6N2E2_5074	0.55	-1.3
5,850,838	-		Pf6N2E2_5074	0.55	-0.9
5,850,838	-		Pf6N2E2_5074	0.55	+0.1
5,851,083	+		Pf6N2E2_5074	0.71	-0.5
5,851,083	+		Pf6N2E2_5074	0.71	+0.6
5,851,083	+		Pf6N2E2_5074	0.71	-0.5
5,851,083	+		Pf6N2E2_5074	0.71	-0.5
5,851,083	+		Pf6N2E2_5074	0.71	+0.1
5,851,084	-		Pf6N2E2_5074	0.71	+1.1
5,851,084	-		Pf6N2E2_5074	0.71	+1.1
5,851,084	-		Pf6N2E2_5074	0.71	+0.1
5,851,084	-		Pf6N2E2_5074	0.71	-0.9
5,851,245	+		Pf6N2E2_5074	0.82	-0.5
5,851,245	+		Pf6N2E2_5074	0.82	-0.7
5,851,245	+		Pf6N2E2_5074	0.82	+0.1
5,851,246	-		Pf6N2E2_5074	0.82	+0.1
5,851,326	+		Pf6N2E2_5074	0.87	+0.1
5,851,432	-				-0.5
5,851,432	-				+1.1
5,851,450	-				+1.1
5,851,625	-				+0.1
5,851,625	-				-1.9
5,851,661	+				+0.1
5,851,691	+				+1.1
5,851,691	+				+0.1
5,851,730	+		Pf6N2E2_5075	0.16	-0.5
5,851,731	-		Pf6N2E2_5075	0.16	+0.1
5,851,750	+		Pf6N2E2_5075	0.20	+1.1
5,851,750	+		Pf6N2E2_5075	0.20	+1.2
5,851,753	+		Pf6N2E2_5075	0.20	+1.1
5,851,753	+		Pf6N2E2_5075	0.20	+1.1
5,851,754	-		Pf6N2E2_5075	0.20	+1.1
5,851,800	+		Pf6N2E2_5075	0.29	+1.1
5,851,801	-		Pf6N2E2_5075	0.29	+1.1
5,851,813	+		Pf6N2E2_5075	0.31	-0.7
5,851,843	+		Pf6N2E2_5075	0.36	-0.7
5,851,843	+		Pf6N2E2_5075	0.36	-0.5
5,851,868	-		Pf6N2E2_5075	0.41	-0.6
5,851,868	-		Pf6N2E2_5075	0.41	+1.1
5,851,868	-		Pf6N2E2_5075	0.41	+0.1
5,851,868	-		Pf6N2E2_5075	0.41	+0.1
5,851,942	-		Pf6N2E2_5075	0.54	+0.1
5,851,942	-		Pf6N2E2_5075	0.54	+1.1
5,852,056	+		Pf6N2E2_5075	0.75	+1.1
5,852,056	+		Pf6N2E2_5075	0.75	+1.1
5,852,056	+		Pf6N2E2_5075	0.75	-1.5
5,852,056	+		Pf6N2E2_5075	0.75	-0.5
5,852,056	+		Pf6N2E2_5075	0.75	+0.5
5,852,056	-		Pf6N2E2_5075	0.75	+0.1
5,852,057	-		Pf6N2E2_5075	0.75	-1.0
5,852,057	-		Pf6N2E2_5075	0.75	-0.9
5,852,057	-		Pf6N2E2_5075	0.75	+1.1
5,852,057	-		Pf6N2E2_5075	0.75	-0.8
5,852,057	-		Pf6N2E2_5075	0.75	+1.1
5,852,057	-		Pf6N2E2_5075	0.75	-0.9
5,852,057	-		Pf6N2E2_5075	0.75	+1.1
5,852,057	-		Pf6N2E2_5075	0.75	-1.0
5,852,258	+				+1.1
5,852,259	-				+1.1
5,852,259	-				+0.1
5,852,259	-				-1.0
5,852,259	-				-0.5
5,852,502	+		Pf6N2E2_5076	0.19	-0.9
5,852,503	-		Pf6N2E2_5076	0.19	-1.7