Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4721

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
5,459,027	+		Pf6N2E2_4720	0.74	-1.8
5,459,028	-		Pf6N2E2_4720	0.74	-3.9
5,459,028	-		Pf6N2E2_4720	0.74	+0.2
5,459,028	-		Pf6N2E2_4720	0.74	-1.7
5,459,060	+		Pf6N2E2_4720	0.75	+1.2
5,459,060	+		Pf6N2E2_4720	0.75	+1.2
5,459,060	+		Pf6N2E2_4720	0.75	-2.8
5,459,060	+		Pf6N2E2_4720	0.75	+1.2
5,459,060	+		Pf6N2E2_4720	0.75	-3.1
5,459,061	-		Pf6N2E2_4720	0.75	+0.2
5,459,061	-		Pf6N2E2_4720	0.75	-2.5
5,459,249	+		Pf6N2E2_4720	0.82	+0.2
5,459,249	+		Pf6N2E2_4720	0.82	+0.2
5,459,273	+		Pf6N2E2_4720	0.82	+1.2
5,459,318	+		Pf6N2E2_4720	0.84	+0.2
5,459,318	+		Pf6N2E2_4720	0.84	-0.8
5,459,318	+		Pf6N2E2_4720	0.84	+0.8
5,459,319	-		Pf6N2E2_4720	0.84	-1.4
5,459,319	-		Pf6N2E2_4720	0.84	-0.4
5,459,334	-		Pf6N2E2_4720	0.84	+1.2
5,459,355	+		Pf6N2E2_4720	0.85	-0.4
5,459,355	+		Pf6N2E2_4720	0.85	-3.1
5,459,355	+		Pf6N2E2_4720	0.85	+1.2
5,459,355	+		Pf6N2E2_4720	0.85	+1.2
5,459,355	+		Pf6N2E2_4720	0.85	-1.6
5,459,355	+		Pf6N2E2_4720	0.85	+1.2
5,459,355	+		Pf6N2E2_4720	0.85	+1.2
5,459,356	-		Pf6N2E2_4720	0.85	+1.2
5,459,356	-		Pf6N2E2_4720	0.85	-0.4
5,459,356	-		Pf6N2E2_4720	0.85	-2.6
5,459,356	-		Pf6N2E2_4720	0.85	-2.5
5,459,442	+		Pf6N2E2_4720	0.88	+0.2
5,459,636	+				+0.2
5,459,636	+				-2.1
5,459,636	+				-3.3
5,459,636	+				-0.4
5,459,636	+				-0.8
5,459,637	-				-2.1
5,459,637	-				+1.2
5,459,797	+				-2.0
5,459,920	+				+1.2
5,459,957	+				-0.4
5,459,957	+				+0.2
5,459,958	-				+0.2
5,459,958	-				+0.2
5,460,384	-		Pf6N2E2_4721	0.70	-2.9
5,460,384	-		Pf6N2E2_4721	0.70	-1.8
5,460,384	-		Pf6N2E2_4721	0.70	+1.2
5,460,384	-		Pf6N2E2_4721	0.70	-0.4
5,460,384	-		Pf6N2E2_4721	0.70	-2.1
5,460,384	-		Pf6N2E2_4721	0.70	+1.2
5,460,384	-		Pf6N2E2_4721	0.70	-2.6
5,460,582	+				-1.2
5,460,583	-				+0.2
5,460,613	+				+0.2
5,460,674	+				+0.4
5,460,675	-				+0.2
5,460,728	-				+1.2
5,460,728	-				+1.2
5,460,772	+				+0.2
5,460,850	-				+1.2
5,460,892	+		Pf6N2E2_4722	0.12	+0.2
5,461,026	+		Pf6N2E2_4722	0.27	+1.2
5,461,213	+		Pf6N2E2_4722	0.49	-0.4
5,461,214	-		Pf6N2E2_4722	0.49	-0.6
5,461,214	-		Pf6N2E2_4722	0.49	-1.2
5,461,214	-		Pf6N2E2_4722	0.49	-2.5
5,461,214	-		Pf6N2E2_4722	0.49	-2.1
5,461,312	+		Pf6N2E2_4722	0.60	+0.2
5,461,423	+		Pf6N2E2_4722	0.73	-1.8
5,461,423	+		Pf6N2E2_4722	0.73	-1.5
5,461,423	+		Pf6N2E2_4722	0.73	+1.2
5,461,462	+		Pf6N2E2_4722	0.78	+0.2
5,461,462	+		Pf6N2E2_4722	0.78	-0.6
5,461,462	+		Pf6N2E2_4722	0.78	+1.2
5,461,462	+		Pf6N2E2_4722	0.78	+1.2
5,461,462	+		Pf6N2E2_4722	0.78	+1.2
5,461,462	+		Pf6N2E2_4722	0.78	-0.4
5,461,463	-		Pf6N2E2_4722	0.78	-0.4
5,461,463	-		Pf6N2E2_4722	0.78	+0.2
5,461,463	-		Pf6N2E2_4722	0.78	-0.4
5,461,531	+		Pf6N2E2_4722	0.86	+1.2