Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4702

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
5,432,968	-		Pf6N2E2_4700	0.72	+1.2
5,433,070	-		Pf6N2E2_4700	0.82	-0.8
5,433,270	+				+1.2
5,433,298	+				+0.2
5,433,352	+				-0.4
5,433,407	+		Pf6N2E2_4701	0.15	+0.2
5,433,407	+		Pf6N2E2_4701	0.15	-2.5
5,433,407	+		Pf6N2E2_4701	0.15	-0.8
5,433,408	-		Pf6N2E2_4701	0.15	+0.2
5,433,473	+		Pf6N2E2_4701	0.28	+0.2
5,433,489	-		Pf6N2E2_4701	0.31	+1.2
5,433,489	-		Pf6N2E2_4701	0.31	-0.4
5,433,575	+		Pf6N2E2_4701	0.47	+1.2
5,433,575	+		Pf6N2E2_4701	0.47	+1.2
5,433,575	+		Pf6N2E2_4701	0.47	+1.2
5,433,575	+		Pf6N2E2_4701	0.47	+1.2
5,433,575	+		Pf6N2E2_4701	0.47	-2.0
5,433,575	+		Pf6N2E2_4701	0.47	-0.4
5,433,576	-		Pf6N2E2_4701	0.47	-0.4
5,433,576	-		Pf6N2E2_4701	0.47	-4.2
5,433,576	-		Pf6N2E2_4701	0.47	-2.1
5,433,576	-		Pf6N2E2_4701	0.47	-2.6
5,433,577	+		Pf6N2E2_4701	0.47	+0.2
5,433,577	+		Pf6N2E2_4701	0.47	+1.2
5,433,578	-		Pf6N2E2_4701	0.47	-2.8
5,433,578	-		Pf6N2E2_4701	0.47	+1.2
5,433,578	-		Pf6N2E2_4701	0.47	+1.2
5,433,578	-		Pf6N2E2_4701	0.47	-0.8
5,433,578	-		Pf6N2E2_4701	0.47	-3.3
5,433,578	-		Pf6N2E2_4701	0.47	+0.2
5,433,578	-		Pf6N2E2_4701	0.47	+0.2
5,433,680	+		Pf6N2E2_4701	0.67	+1.2
5,433,680	+		Pf6N2E2_4701	0.67	-0.4
5,433,680	+		Pf6N2E2_4701	0.67	+0.2
5,433,681	-		Pf6N2E2_4701	0.67	+1.2
5,433,681	-		Pf6N2E2_4701	0.67	+0.2
5,433,681	-		Pf6N2E2_4701	0.67	-1.6
5,433,687	-		Pf6N2E2_4701	0.68	-0.8
5,433,687	-		Pf6N2E2_4701	0.68	+1.2
5,433,713	+		Pf6N2E2_4701	0.73	+0.2
5,433,713	+		Pf6N2E2_4701	0.73	-0.6
5,433,713	+		Pf6N2E2_4701	0.73	+1.2
5,433,713	+		Pf6N2E2_4701	0.73	-1.4
5,433,713	+		Pf6N2E2_4701	0.73	+1.2
5,433,714	-		Pf6N2E2_4701	0.73	-3.1
5,433,714	-		Pf6N2E2_4701	0.73	-0.4
5,433,800	+		Pf6N2E2_4701	0.89	+0.2
5,433,800	+		Pf6N2E2_4701	0.89	+1.2
5,433,854	+				+1.2
5,433,854	+				-2.0
5,433,959	+				-0.8
5,433,959	+				+1.2
5,433,959	+				+1.2
5,433,960	-				-2.1
5,434,001	+				-1.6
5,434,001	+				-2.6
5,434,002	-				-0.4
5,434,002	-				+0.2
5,434,325	+		Pf6N2E2_4702	0.22	-1.8
5,434,325	+		Pf6N2E2_4702	0.22	-0.7
5,434,325	+		Pf6N2E2_4702	0.22	+1.2
5,434,326	-		Pf6N2E2_4702	0.22	-0.9
5,434,326	-		Pf6N2E2_4702	0.22	-3.5
5,434,326	-		Pf6N2E2_4702	0.22	-3.2
5,434,326	-		Pf6N2E2_4702	0.22	+1.2
5,434,326	-		Pf6N2E2_4702	0.22	+0.2
5,434,604	+		Pf6N2E2_4702	0.36	+0.2
5,434,604	+		Pf6N2E2_4702	0.36	-1.0
5,434,604	+		Pf6N2E2_4702	0.36	-2.9
5,434,604	+		Pf6N2E2_4702	0.36	+1.2
5,434,605	-		Pf6N2E2_4702	0.36	-5.2
5,434,608	-		Pf6N2E2_4702	0.36	-0.4
5,434,608	-		Pf6N2E2_4702	0.36	-1.6
5,434,608	-		Pf6N2E2_4702	0.36	-0.8
5,434,608	-		Pf6N2E2_4702	0.36	-3.2
5,434,608	-		Pf6N2E2_4702	0.36	+1.2
5,434,608	-		Pf6N2E2_4702	0.36	+0.2
5,434,700	+		Pf6N2E2_4702	0.40	-2.2
5,434,701	-		Pf6N2E2_4702	0.40	-2.2
5,434,820	+		Pf6N2E2_4702	0.46	+0.2
5,434,821	-		Pf6N2E2_4702	0.46	-2.6
5,434,928	+		Pf6N2E2_4702	0.51	-0.4
5,434,928	+		Pf6N2E2_4702	0.51	+0.2
5,434,928	+		Pf6N2E2_4702	0.51	-3.1
5,434,928	+		Pf6N2E2_4702	0.51	+1.2
5,434,928	+		Pf6N2E2_4702	0.51	+1.2
5,434,928	+		Pf6N2E2_4702	0.51	-2.6
5,434,928	+		Pf6N2E2_4702	0.51	-1.2
5,434,928	+		Pf6N2E2_4702	0.51	+1.2
5,434,928	+		Pf6N2E2_4702	0.51	-0.8
5,434,928	+		Pf6N2E2_4702	0.51	+1.2
5,434,929	-		Pf6N2E2_4702	0.51	+0.2
5,434,929	-		Pf6N2E2_4702	0.51	+1.2
5,434,929	-		Pf6N2E2_4702	0.51	+1.4
5,434,929	-		Pf6N2E2_4702	0.51	-1.1
5,434,929	-		Pf6N2E2_4702	0.51	-2.2
5,434,947	-		Pf6N2E2_4702	0.52	-3.3
5,434,947	-		Pf6N2E2_4702	0.52	+0.2
5,434,997	+		Pf6N2E2_4702	0.55	+1.2
5,434,997	+		Pf6N2E2_4702	0.55	-3.0
5,434,997	+		Pf6N2E2_4702	0.55	+1.2
5,434,998	-		Pf6N2E2_4702	0.55	+1.2
5,434,998	-		Pf6N2E2_4702	0.55	+1.2
5,435,201	-		Pf6N2E2_4702	0.64	+0.2
5,435,290	-		Pf6N2E2_4702	0.69	-3.5
5,435,290	-		Pf6N2E2_4702	0.69	-2.0
5,435,432	+		Pf6N2E2_4702	0.76	+1.2
5,435,432	+		Pf6N2E2_4702	0.76	+0.2
5,435,561	+		Pf6N2E2_4702	0.82	-3.5
5,435,561	+		Pf6N2E2_4702	0.82	-0.8
5,435,561	+		Pf6N2E2_4702	0.82	-3.3
5,435,561	+		Pf6N2E2_4702	0.82	+0.2
5,435,561	+		Pf6N2E2_4702	0.82	-3.5
5,435,562	-		Pf6N2E2_4702	0.82	+1.2
5,435,562	-		Pf6N2E2_4702	0.82	+0.2
5,435,576	+		Pf6N2E2_4702	0.83	-0.4
5,435,576	+		Pf6N2E2_4702	0.83	-1.6
5,435,577	-		Pf6N2E2_4702	0.83	-0.4
5,435,577	-		Pf6N2E2_4702	0.83	-3.7
5,435,624	+		Pf6N2E2_4702	0.85	+0.2
5,435,625	-		Pf6N2E2_4702	0.85	-3.0
5,435,625	-		Pf6N2E2_4702	0.85	-0.4
5,435,666	+		Pf6N2E2_4702	0.87	-2.6
5,435,666	+		Pf6N2E2_4702	0.87	+0.2
5,435,666	+		Pf6N2E2_4702	0.87	-1.6
5,435,666	+		Pf6N2E2_4702	0.87	+0.2
5,435,742	-				+1.2
5,435,744	+				+0.2
5,435,745	-				-1.1
5,435,881	+				-0.4
5,435,881	+				+1.2
5,435,882	-				+1.2
5,435,882	-				+1.2
5,435,882	-				+1.2
5,435,882	-				+1.2
5,435,882	-				-0.8
5,435,882	-				-1.0
5,435,882	-				+1.2
5,435,884	+				+0.2
5,435,885	-				+0.2
5,435,900	+				-1.1
5,435,901	-				-2.6
5,435,901	-				+0.2
5,435,947	+				+1.2
5,435,947	+				-0.4
5,435,948	-				+1.2
5,435,948	-				-3.2
5,435,948	-				-1.6
5,435,948	-				+1.2
5,436,083	+		Pf6N2E2_4703	0.74	+0.2
5,436,083	+		Pf6N2E2_4703	0.74	-0.7
5,436,083	+		Pf6N2E2_4703	0.74	+1.2
5,436,083	+		Pf6N2E2_4703	0.74	+1.2
5,436,083	+		Pf6N2E2_4703	0.74	-0.8
5,436,083	+		Pf6N2E2_4703	0.74	-0.4
5,436,083	+		Pf6N2E2_4703	0.74	-1.4
5,436,084	-		Pf6N2E2_4703	0.75	-3.1
5,436,084	-		Pf6N2E2_4703	0.75	-3.0
5,436,084	-		Pf6N2E2_4703	0.75	+1.2
5,436,084	-		Pf6N2E2_4703	0.75	-2.0
5,436,084	-		Pf6N2E2_4703	0.75	-1.8
5,436,139	+				+0.2
5,436,139	+				-2.0
5,436,139	+				+1.2
5,436,139	+				+0.2
5,436,140	-				+1.2
5,436,140	-				-2.5
5,436,140	-				+1.2
5,436,140	-				+1.2
5,436,140	-				+1.2
5,436,140	-				+1.2
5,436,161	-				-0.8
5,436,217	+				+1.2
5,436,217	+				+0.2
5,436,217	+				-1.1
5,436,217	+				+0.2
5,436,217	+				+1.2
5,436,217	+				+0.2
5,436,218	-				+0.2
5,436,218	-				-0.8
5,436,218	-				+1.2
5,436,218	-				+1.2
5,436,218	-				+0.2
5,436,218	-				-2.4
5,436,218	-				-3.4
5,436,218	-				-1.1
5,436,218	-				+1.2
5,436,284	+				+0.2
5,436,284	+				+1.2
5,436,284	+				-0.4
5,436,284	+				+0.2
5,436,284	+				-1.3
5,436,284	+				-1.8
5,436,284	+				+1.2
5,436,285	-				-2.8
5,436,323	+				+1.2
5,436,323	+				-3.0
5,436,323	+				+0.2
5,436,323	+				+1.2
5,436,323	+				-1.4
5,436,323	+				-3.7
5,436,324	-				+0.2
5,436,324	-				-3.1
5,436,324	-				+0.2
5,436,324	-				-2.5
5,436,324	-				-2.9
5,436,324	-				-0.4
5,436,324	-				-2.6
5,436,476	+		Pf6N2E2_4704	0.17	-0.4
5,436,477	-		Pf6N2E2_4704	0.17	-4.0
5,436,477	-		Pf6N2E2_4704	0.17	+0.2