Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3884

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
4,516,706	+		Pf6N2E2_3883	0.48	-0.9
4,516,758	-		Pf6N2E2_3883	0.52	+1.1
4,516,947	+		Pf6N2E2_3883	0.66	+0.1
4,516,947	+		Pf6N2E2_3883	0.66	-2.7
4,516,947	+		Pf6N2E2_3883	0.66	+1.1
4,516,948	-		Pf6N2E2_3883	0.66	-0.3
4,517,006	+		Pf6N2E2_3883	0.70	-0.7
4,517,006	+		Pf6N2E2_3883	0.70	+1.1
4,517,006	+		Pf6N2E2_3883	0.70	-1.8
4,517,007	-		Pf6N2E2_3883	0.70	-0.2
4,517,007	-		Pf6N2E2_3883	0.70	-0.7
4,517,362	+				+0.4
4,517,362	+				-0.4
4,517,363	-				+1.1
4,517,363	-				+1.1
4,517,427	-				+1.1
4,517,427	-				+1.1
4,517,427	-				-0.5
4,517,479	+				-0.5
4,517,561	+		Pf6N2E2_3884	0.22	-1.2
4,517,561	+		Pf6N2E2_3884	0.22	+1.1
4,517,561	+		Pf6N2E2_3884	0.22	-0.5
4,517,561	+		Pf6N2E2_3884	0.22	+1.1
4,517,562	-		Pf6N2E2_3884	0.22	+1.1
4,517,562	-		Pf6N2E2_3884	0.22	-1.5
4,517,562	-		Pf6N2E2_3884	0.22	+1.1
4,517,562	-		Pf6N2E2_3884	0.22	+0.1
4,517,562	-		Pf6N2E2_3884	0.22	+1.1
4,517,626	+		Pf6N2E2_3884	0.36	+0.1
4,517,626	+		Pf6N2E2_3884	0.36	+0.1
4,517,627	-		Pf6N2E2_3884	0.36	-1.5
4,517,700	+		Pf6N2E2_3884	0.52	-0.5
4,517,700	+		Pf6N2E2_3884	0.52	-1.5
4,517,729	-		Pf6N2E2_3884	0.59	-0.5
4,517,810	-		Pf6N2E2_3884	0.77	+0.1
4,517,810	-		Pf6N2E2_3884	0.77	+1.1
4,517,899	+				-0.6
4,517,899	+				-0.5
4,517,900	-				-0.8
4,517,900	-				-0.9
4,517,900	-				-0.9
4,518,038	-				+1.1
4,518,038	-				-0.9
4,518,064	+				+0.1
4,518,064	+				+1.1
4,518,064	+				+1.1
4,518,064	+				+1.1
4,518,065	-				-1.5
4,518,065	-				+1.1
4,518,111	+				-0.1
4,518,112	-				+0.1
4,518,112	-				+1.1
4,518,112	-				+1.1
4,518,190	+		Pf6N2E2_3885	0.18	+1.1
4,518,447	+		Pf6N2E2_3885	0.49	+0.1
4,518,448	-		Pf6N2E2_3885	0.49	+0.1
4,518,485	+		Pf6N2E2_3885	0.53	-0.5
4,518,838	+				+1.1
4,518,839	-				-1.5
4,518,914	-				-0.9