Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3508

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
4,087,585	-		Pf6N2E2_3507	0.44	+1.1
4,087,682	+		Pf6N2E2_3507	0.53	-0.7
4,087,879	-		Pf6N2E2_3507	0.72	-0.5
4,087,939	-		Pf6N2E2_3507	0.77	-0.8
4,088,055	+		Pf6N2E2_3507	0.88	+1.1
4,088,056	-		Pf6N2E2_3507	0.88	-0.9
4,088,106	+				+0.6
4,088,107	-				+0.1
4,088,226	+				-0.5
4,088,303	+				+1.1
4,088,303	+				+1.1
4,088,303	+				+0.1
4,088,303	+				-0.9
4,088,303	+				-0.5
4,088,303	+				+0.1
4,088,303	+				+1.1
4,088,304	-				+0.1
4,088,304	-				+1.1
4,088,304	-				+0.1
4,088,304	-				+0.1
4,088,304	-				-0.9
4,088,304	-				-0.2
4,088,304	-				+1.1
4,088,305	+				+1.1
4,088,305	+				-0.5
4,088,306	-				+0.1
4,088,306	-				-1.3
4,088,306	-				+1.1
4,088,306	-				-1.3
4,088,329	-				+1.1
4,088,381	+				+1.1
4,088,381	+				+0.1
4,088,381	+				-0.0
4,088,382	-				+1.6
4,088,447	+				+0.1
4,088,448	-				+1.1
4,088,448	-				-0.9
4,088,451	+				-0.5
4,088,451	+				+0.5
4,088,451	+				+1.1
4,088,451	+				+1.1
4,088,451	+				+1.1
4,088,452	-				+1.1
4,088,452	-				-1.6
4,088,455	-				-0.5
4,088,463	+				-1.2
4,088,464	-				+1.1
4,088,523	-				-0.5
4,088,523	-				+1.1
4,088,839	+		Pf6N2E2_3508	0.22	+1.1
4,088,839	+		Pf6N2E2_3508	0.22	+1.1
4,088,839	+		Pf6N2E2_3508	0.22	+1.1
4,088,839	+		Pf6N2E2_3508	0.22	-1.1
4,088,839	+		Pf6N2E2_3508	0.22	+1.1
4,088,839	+		Pf6N2E2_3508	0.22	+0.1
4,088,839	+		Pf6N2E2_3508	0.22	-1.5
4,088,839	+		Pf6N2E2_3508	0.22	-1.3
4,088,839	+		Pf6N2E2_3508	0.22	-1.6
4,088,839	+		Pf6N2E2_3508	0.22	+1.1
4,088,839	+		Pf6N2E2_3508	0.22	-1.9
4,088,839	+		Pf6N2E2_3508	0.22	+0.1
4,088,839	+		Pf6N2E2_3508	0.22	+1.1
4,088,840	-		Pf6N2E2_3508	0.23	+0.1
4,088,840	-		Pf6N2E2_3508	0.23	-2.9
4,088,840	-		Pf6N2E2_3508	0.23	+0.1
4,088,840	-		Pf6N2E2_3508	0.23	+1.1
4,088,840	-		Pf6N2E2_3508	0.23	-1.5
4,089,200	-		Pf6N2E2_3508	0.44	-0.9
4,089,208	+		Pf6N2E2_3508	0.45	-0.5
4,089,364	+		Pf6N2E2_3508	0.54	-0.5
4,089,364	+		Pf6N2E2_3508	0.54	-2.9
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	+0.1
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	+0.1
4,089,364	+		Pf6N2E2_3508	0.54	-0.5
4,089,364	+		Pf6N2E2_3508	0.54	-1.6
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	-1.3
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	+1.1
4,089,364	+		Pf6N2E2_3508	0.54	-0.9
4,089,365	-		Pf6N2E2_3508	0.54	-0.5
4,089,365	-		Pf6N2E2_3508	0.54	+0.1
4,089,365	-		Pf6N2E2_3508	0.54	+1.1
4,089,365	-		Pf6N2E2_3508	0.54	+0.1
4,089,365	-		Pf6N2E2_3508	0.54	+0.1
4,089,365	-		Pf6N2E2_3508	0.54	+0.6
4,089,365	-		Pf6N2E2_3508	0.54	-1.3
4,089,365	-		Pf6N2E2_3508	0.54	+0.1
4,089,365	-		Pf6N2E2_3508	0.54	+0.1
4,089,365	-		Pf6N2E2_3508	0.54	+0.1
4,089,365	-		Pf6N2E2_3508	0.54	-0.9
4,089,365	-		Pf6N2E2_3508	0.54	-0.5
4,089,365	-		Pf6N2E2_3508	0.54	+0.1
4,089,365	-		Pf6N2E2_3508	0.54	+1.1
4,089,365	-		Pf6N2E2_3508	0.54	+1.1
4,089,365	-		Pf6N2E2_3508	0.54	+1.1
4,089,365	-		Pf6N2E2_3508	0.54	+0.1
4,089,365	-		Pf6N2E2_3508	0.54	-1.0
4,089,405	-		Pf6N2E2_3508	0.56	-1.4
4,089,405	-		Pf6N2E2_3508	0.56	+0.1
4,089,421	+		Pf6N2E2_3508	0.57	-1.5
4,089,442	+		Pf6N2E2_3508	0.59	+1.1
4,089,442	+		Pf6N2E2_3508	0.59	+1.1
4,089,442	+		Pf6N2E2_3508	0.59	-0.5
4,089,442	+		Pf6N2E2_3508	0.59	-1.4
4,089,442	+		Pf6N2E2_3508	0.59	+0.1
4,089,443	-		Pf6N2E2_3508	0.59	+0.1
4,089,443	-		Pf6N2E2_3508	0.59	+0.1
4,089,443	-		Pf6N2E2_3508	0.59	-0.9
4,089,443	-		Pf6N2E2_3508	0.59	-0.5
4,089,443	-		Pf6N2E2_3508	0.59	+0.1
4,089,443	-		Pf6N2E2_3508	0.59	+1.1
4,089,443	-		Pf6N2E2_3508	0.59	-0.5
4,089,616	+		Pf6N2E2_3508	0.69	+0.1
4,089,616	+		Pf6N2E2_3508	0.69	-1.1
4,089,616	+		Pf6N2E2_3508	0.69	-0.9
4,089,617	-		Pf6N2E2_3508	0.69	-1.6
4,089,617	-		Pf6N2E2_3508	0.69	-0.9
4,089,631	-		Pf6N2E2_3508	0.70	+0.1
4,090,124	+				-0.5
4,090,186	-				+1.1
4,090,186	-				+1.1
4,090,217	-				+1.1
4,090,227	+				+0.1
4,090,228	-				-0.5
4,090,228	-				+1.1
4,090,231	+				-1.6
4,090,232	-				+1.1
4,090,293	-				+1.1
4,090,293	-				+0.1
4,090,364	+				+0.0
4,090,365	-				-0.5
4,090,365	-				+1.1
4,090,557	+		Pf6N2E2_3509	0.19	+0.1
4,090,558	-		Pf6N2E2_3509	0.19	-1.1
4,090,558	-		Pf6N2E2_3509	0.19	+1.1
4,090,625	+		Pf6N2E2_3509	0.22	+1.1
4,090,626	-		Pf6N2E2_3509	0.23	-0.7
4,090,668	+		Pf6N2E2_3509	0.25	-0.9
4,090,899	+		Pf6N2E2_3509	0.37	-0.5
4,090,900	-		Pf6N2E2_3509	0.37	-0.5