Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_976

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
1,143,159	+				+0.8
1,143,159	+				+0.2
1,143,160	-				+0.8
1,143,160	-				+0.8
1,143,245	+				+0.8
1,143,245	+				+0.8
1,143,245	+				+0.8
1,143,245	+				+0.8
1,143,245	+				+0.8
1,143,246	-				+0.8
1,143,246	-				+0.8
1,143,446	-		Pf6N2E2_975	0.27	-0.2
1,143,446	-		Pf6N2E2_975	0.27	+0.8
1,143,446	-		Pf6N2E2_975	0.27	+0.8
1,143,575	+		Pf6N2E2_975	0.44	+0.8
1,143,581	-		Pf6N2E2_975	0.45	-0.2
1,143,600	+		Pf6N2E2_975	0.47	+1.8
1,143,615	+		Pf6N2E2_975	0.49	+0.8
1,143,615	+		Pf6N2E2_975	0.49	+0.8
1,143,615	+		Pf6N2E2_975	0.49	-0.4
1,143,648	+		Pf6N2E2_975	0.54	-0.7
1,143,648	+		Pf6N2E2_975	0.54	-0.2
1,143,649	-		Pf6N2E2_975	0.54	+0.8
1,143,656	+		Pf6N2E2_975	0.55	+0.8
1,143,657	-		Pf6N2E2_975	0.55	+0.8
1,143,807	+		Pf6N2E2_975	0.75	-0.2
1,143,858	+		Pf6N2E2_975	0.81	+0.8
1,144,013	+				+0.8
1,144,105	+				-2.2
1,144,105	+				-0.8
1,144,143	-				+0.8
1,144,168	+				-0.2
1,144,231	-				-0.2
1,144,419	+		Pf6N2E2_976	0.23	-1.0
1,144,419	+		Pf6N2E2_976	0.23	+0.8
1,144,465	+		Pf6N2E2_976	0.27	-0.2
1,144,494	+		Pf6N2E2_976	0.30	+0.8
1,144,524	+		Pf6N2E2_976	0.32	+0.4
1,144,524	+		Pf6N2E2_976	0.32	+0.8
1,144,524	+		Pf6N2E2_976	0.32	-0.8
1,144,525	-		Pf6N2E2_976	0.32	+1.8
1,144,525	-		Pf6N2E2_976	0.32	+0.8
1,144,525	-		Pf6N2E2_976	0.32	-2.5
1,144,525	-		Pf6N2E2_976	0.32	-0.2
1,144,525	-		Pf6N2E2_976	0.32	+0.8
1,144,525	-		Pf6N2E2_976	0.32	+0.8
1,144,528	+		Pf6N2E2_976	0.33	-0.9
1,144,528	+		Pf6N2E2_976	0.33	-0.2
1,144,529	-		Pf6N2E2_976	0.33	-1.8
1,144,529	-		Pf6N2E2_976	0.33	-0.1
1,144,530	+		Pf6N2E2_976	0.33	+0.8
1,144,531	-		Pf6N2E2_976	0.33	+0.8
1,144,541	-		Pf6N2E2_976	0.34	-0.2
1,144,541	-		Pf6N2E2_976	0.34	-0.2
1,144,543	+		Pf6N2E2_976	0.34	+0.3
1,144,543	+		Pf6N2E2_976	0.34	+0.8
1,144,544	-		Pf6N2E2_976	0.34	+0.8
1,144,548	+		Pf6N2E2_976	0.34	+0.8
1,144,548	+		Pf6N2E2_976	0.34	+0.8
1,144,549	-		Pf6N2E2_976	0.34	+0.2
1,144,910	+		Pf6N2E2_976	0.65	+0.8
1,144,910	+		Pf6N2E2_976	0.65	-0.2
1,144,911	-		Pf6N2E2_976	0.65	-1.5
1,144,925	-		Pf6N2E2_976	0.66	-0.7
1,144,925	-		Pf6N2E2_976	0.66	-0.2
1,144,958	-		Pf6N2E2_976	0.69	-0.2
1,144,961	-		Pf6N2E2_976	0.69	+0.8
1,144,961	-		Pf6N2E2_976	0.69	+0.8
1,145,052	-		Pf6N2E2_976	0.77	+0.8
1,145,114	-		Pf6N2E2_976	0.82	+0.8
1,145,114	-		Pf6N2E2_976	0.82	+0.8
1,145,114	-		Pf6N2E2_976	0.82	+0.8
1,145,114	-		Pf6N2E2_976	0.82	-0.2
1,145,269	+				+0.8
1,145,270	-				+0.8
1,145,270	-				+0.8
1,145,270	-				-0.2
1,145,337	-				+0.1
1,145,337	-				+0.8
1,145,342	-				+0.8
1,145,342	-				-0.2
1,145,442	+		Pf6N2E2_977	0.21	-0.2
1,145,442	+		Pf6N2E2_977	0.21	-1.9
1,145,517	+		Pf6N2E2_977	0.35	+0.8
1,145,575	+		Pf6N2E2_977	0.46	-0.2
1,145,575	+		Pf6N2E2_977	0.46	-0.2
1,145,585	+		Pf6N2E2_977	0.47	+0.8
1,145,586	-		Pf6N2E2_977	0.48	-0.2
1,145,631	-		Pf6N2E2_977	0.56	-1.3
1,145,758	+		Pf6N2E2_977	0.79	-1.2
1,145,758	+		Pf6N2E2_977	0.79	+0.2
1,145,758	+		Pf6N2E2_977	0.79	-0.4
1,145,758	+		Pf6N2E2_977	0.79	+0.8
1,145,758	+		Pf6N2E2_977	0.79	+0.8
1,145,758	+		Pf6N2E2_977	0.79	+0.8
1,145,758	+		Pf6N2E2_977	0.79	+0.8
1,145,758	+		Pf6N2E2_977	0.79	+1.8
1,145,759	-		Pf6N2E2_977	0.79	+0.8
1,145,906	-				+0.8
1,145,906	-				+0.8
1,145,912	+				+0.8
1,145,957	-				+0.8
1,146,027	+				-1.0
1,146,039	-		Pf6N2E2_978	0.11	-3.8
1,146,125	+		Pf6N2E2_978	0.16	-0.6
1,146,125	+		Pf6N2E2_978	0.16	+0.1
1,146,125	+				+0.8
1,146,125	+		Pf6N2E2_978	0.16	+0.8
1,146,126	-		Pf6N2E2_978	0.16	+0.8