Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5326

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
6,120,087	+				+1.0
6,120,120	+		Pf6N2E2_5325	0.12	-1.0
6,120,120	+		Pf6N2E2_5325	0.12	+1.0
6,120,120	+		Pf6N2E2_5325	0.12	-1.3
6,120,121	-		Pf6N2E2_5325	0.12	+1.0
6,120,121	-		Pf6N2E2_5325	0.12	+0.0
6,120,121	-		Pf6N2E2_5325	0.12	+1.0
6,120,121	-		Pf6N2E2_5325	0.12	-3.7
6,120,405	+		Pf6N2E2_5325	0.45	+0.0
6,120,405	+		Pf6N2E2_5325	0.45	+0.0
6,120,405	+		Pf6N2E2_5325	0.45	+1.0
6,120,406	-		Pf6N2E2_5325	0.45	+1.0
6,120,406	-		Pf6N2E2_5325	0.45	-0.0
6,120,406	-		Pf6N2E2_5325	0.45	+0.0
6,120,435	+		Pf6N2E2_5325	0.48	-1.0
6,120,435	+		Pf6N2E2_5325	0.48	-1.0
6,120,435	+		Pf6N2E2_5325	0.48	+1.0
6,120,435	+		Pf6N2E2_5325	0.48	+1.0
6,120,436	-		Pf6N2E2_5325	0.48	+0.2
6,120,718	-		Pf6N2E2_5325	0.80	-0.5
6,120,718	-		Pf6N2E2_5325	0.80	+1.0
6,120,718	-		Pf6N2E2_5325	0.80	-1.0
6,120,720	+		Pf6N2E2_5325	0.80	+1.0
6,120,720	+		Pf6N2E2_5325	0.80	+0.0
6,120,720	+		Pf6N2E2_5325	0.80	+1.0
6,120,721	-		Pf6N2E2_5325	0.80	+0.0
6,120,721	-		Pf6N2E2_5325	0.80	+1.0
6,120,721	-		Pf6N2E2_5325	0.80	-2.3
6,120,721	-		Pf6N2E2_5325	0.80	-1.0
6,120,721	-		Pf6N2E2_5325	0.80	-0.5
6,120,721	-		Pf6N2E2_5325	0.80	+0.0
6,120,721	-		Pf6N2E2_5325	0.80	+1.0
6,120,760	+		Pf6N2E2_5325	0.85	+1.0
6,120,776	+		Pf6N2E2_5325	0.86	-1.9
6,120,811	+				+0.0
6,120,872	+				+1.0
6,120,873	-				+1.0
6,120,875	+				+1.0
6,120,875	+				-0.5
6,120,875	+				+1.0
6,120,876	-				+0.0
6,120,876	-				+1.0
6,120,876	-				-0.5
6,120,876	-				-0.9
6,120,885	+				-1.0
6,120,944	-				+0.0
6,120,978	+				+1.0
6,121,040	+				+1.0
6,121,040	+				-0.5
6,121,040	+				+1.0
6,121,040	+				-1.3
6,121,040	+				+1.0
6,121,040	+				+0.0
6,121,040	+				-0.1
6,121,040	+				+0.0
6,121,040	+				+1.0
6,121,040	+				+1.0
6,121,040	+				+1.0
6,121,040	+				+0.0
6,121,040	+				+1.0
6,121,040	+				-0.5
6,121,041	-				+0.0
6,121,041	-				+1.0
6,121,041	-				+0.0
6,121,041	-				+1.0
6,121,041	-				-0.7
6,121,041	-				+1.0
6,121,041	-				+1.0
6,121,078	+				+1.0
6,121,110	-				+1.0
6,121,221	-		Pf6N2E2_5326	0.19	+1.0
6,121,343	+		Pf6N2E2_5326	0.29	+1.0
6,121,343	+		Pf6N2E2_5326	0.29	+0.0
6,121,343	+		Pf6N2E2_5326	0.29	+1.0
6,121,344	-		Pf6N2E2_5326	0.29	-1.4
6,121,354	+		Pf6N2E2_5326	0.30	+0.0
6,121,354	+		Pf6N2E2_5326	0.30	+0.0
6,121,354	+		Pf6N2E2_5326	0.30	-1.1
6,121,355	-		Pf6N2E2_5326	0.30	+0.0
6,121,377	+		Pf6N2E2_5326	0.32	+1.0
6,121,554	+		Pf6N2E2_5326	0.47	-0.5
6,121,554	+		Pf6N2E2_5326	0.47	+1.0
6,121,560	+		Pf6N2E2_5326	0.47	+0.0
6,121,561	-		Pf6N2E2_5326	0.47	-0.5
6,121,607	+		Pf6N2E2_5326	0.51	-1.1
6,121,767	+		Pf6N2E2_5326	0.65	-1.0
6,121,768	-		Pf6N2E2_5326	0.65	-1.8
6,121,813	+		Pf6N2E2_5326	0.68	+1.0
6,122,083	+				-0.5
6,122,084	-				-1.2
6,122,103	+				-1.2
6,122,104	-				+1.0
6,122,104	-				-1.5
6,122,301	+				+1.0
6,122,301	+				+0.0
6,122,301	+				-0.5
6,122,302	-				+1.0
6,122,302	-				+0.3
6,122,416	+		Pf6N2E2_5327	0.10	+1.0
6,122,417	-		Pf6N2E2_5327	0.10	+0.0
6,122,473	+		Pf6N2E2_5327	0.18	+0.0
6,122,473	+		Pf6N2E2_5327	0.18	-0.8
6,122,473	+		Pf6N2E2_5327	0.18	-0.6
6,122,473	+		Pf6N2E2_5327	0.18	+0.0
6,122,473	+		Pf6N2E2_5327	0.18	-2.0
6,122,594	-		Pf6N2E2_5327	0.34	+1.0
6,122,596	+		Pf6N2E2_5327	0.35	-1.0
6,122,597	-		Pf6N2E2_5327	0.35	+1.0
6,122,597	-		Pf6N2E2_5327	0.35	-0.6
6,122,597	-		Pf6N2E2_5327	0.35	-0.5
6,122,809	+		Pf6N2E2_5327	0.63	+1.0
6,122,881	+		Pf6N2E2_5327	0.73	+1.0
6,122,881	+		Pf6N2E2_5327	0.73	+0.0
6,122,881	+		Pf6N2E2_5327	0.73	+1.0
6,122,882	-		Pf6N2E2_5327	0.73	+0.0
6,122,882	-		Pf6N2E2_5327	0.73	-1.3
6,122,882	-		Pf6N2E2_5327	0.73	-0.5
6,123,028	+				+0.0
6,123,028	+				-1.0
6,123,028	+				+1.0
6,123,061	+				+1.0
6,123,061	+				+1.0
6,123,061	+				+1.0
6,123,061	+				+1.0
6,123,062	-				+0.0
6,123,062	-				+0.2
6,123,062	-				-0.5
6,123,070	+				-0.5
6,123,071	-				+1.0
6,123,090	+				+0.0
6,123,183	+				-0.5
6,123,184	-				+1.0