Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4313

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
5,030,118	+		Pf6N2E2_4312	0.22	+1.1
5,030,119	-		Pf6N2E2_4312	0.22	-1.5
5,030,223	-		Pf6N2E2_4312	0.33	-1.9
5,030,235	+		Pf6N2E2_4312	0.34	+0.1
5,030,235	+		Pf6N2E2_4312	0.34	-1.1
5,030,236	-		Pf6N2E2_4312	0.35	-1.1
5,030,391	+		Pf6N2E2_4312	0.51	+0.1
5,030,392	-		Pf6N2E2_4312	0.51	+1.0
5,030,410	+		Pf6N2E2_4312	0.53	-0.9
5,030,410	+		Pf6N2E2_4312	0.53	+1.1
5,030,410	+		Pf6N2E2_4312	0.53	+1.1
5,030,614	-		Pf6N2E2_4312	0.75	-0.9
5,030,614	-		Pf6N2E2_4312	0.75	-0.4
5,030,634	+		Pf6N2E2_4312	0.77	+1.1
5,030,634	+		Pf6N2E2_4312	0.77	+1.1
5,030,634	+		Pf6N2E2_4312	0.77	-0.4
5,030,635	-		Pf6N2E2_4312	0.77	+1.1
5,030,635	-		Pf6N2E2_4312	0.77	-0.4
5,030,635	-		Pf6N2E2_4312	0.77	+1.1
5,030,635	-		Pf6N2E2_4312	0.77	-0.4
5,030,671	+		Pf6N2E2_4312	0.81	-0.9
5,030,793	-				+1.1
5,030,883	+				-0.9
5,030,883	+				-1.2
5,030,884	-				+0.1
5,030,884	-				-0.4
5,030,884	-				+0.1
5,030,974	+				+0.1
5,030,974	+				+0.7
5,031,309	+		Pf6N2E2_4313	0.70	+0.2
5,031,309	+		Pf6N2E2_4313	0.70	-0.7
5,031,309	+		Pf6N2E2_4313	0.70	-0.9
5,031,309	+		Pf6N2E2_4313	0.70	-1.2
5,031,309	+		Pf6N2E2_4313	0.70	+1.1
5,031,309	+		Pf6N2E2_4313	0.70	+1.1
5,031,309	+		Pf6N2E2_4313	0.70	-0.4
5,031,309	+		Pf6N2E2_4313	0.70	+1.1
5,031,309	+		Pf6N2E2_4313	0.70	-0.4
5,031,309	+		Pf6N2E2_4313	0.70	+1.1
5,031,309	+		Pf6N2E2_4313	0.70	-0.7
5,031,310	-		Pf6N2E2_4313	0.71	+1.1
5,031,310	-		Pf6N2E2_4313	0.71	+1.1
5,031,310	-		Pf6N2E2_4313	0.71	+1.1
5,031,310	-		Pf6N2E2_4313	0.71	+1.1
5,031,310	-		Pf6N2E2_4313	0.71	-0.4
5,031,310	-		Pf6N2E2_4313	0.71	-0.0
5,031,310	-		Pf6N2E2_4313	0.71	-0.4
5,031,310	-		Pf6N2E2_4313	0.71	-0.0
5,031,312	+		Pf6N2E2_4313	0.71	+0.1
5,031,312	+		Pf6N2E2_4313	0.71	+0.1
5,031,403	+				-0.7
5,031,404	-				+1.1
5,031,479	+				-0.9
5,031,480	-				+1.1
5,031,480	-				+0.1
5,031,548	+				+1.1
5,031,548	+				-1.1
5,031,553	+				+1.1
5,031,553	+				+0.1
5,031,553	+				-0.9
5,031,553	+				-0.4
5,031,553	+				+1.1
5,031,553	+				+1.1
5,031,553	+				-0.3
5,031,553	+				-0.9
5,031,553	+				+0.1
5,031,554	-				+0.1
5,031,554	-				+0.1
5,031,554	-				+1.1
5,031,554	-				+0.1
5,031,554	-				-0.8
5,031,554	-				+0.1
5,031,554	-				+0.1
5,031,554	-				-0.6
5,031,554	-				+0.1
5,031,554	-				+1.1
5,031,585	+				-0.4
5,031,585	+				+1.1
5,031,585	+				-0.4
5,031,585	+				-0.4
5,031,585	+				+0.1
5,031,585	+				-0.4
5,031,585	+				-0.9
5,031,585	+				+1.1
5,031,586	-				-0.9
5,031,660	+				-0.4
5,031,702	+				+1.1
5,031,708	+				-0.9
5,031,708	+				-0.1
5,031,730	+				-2.7
5,031,730	+				-0.9
5,031,730	+				-0.9
5,031,730	+				+0.1
5,031,731	-				-0.4
5,031,731	-				+0.3
5,031,731	-				+1.0
5,031,775	-				+1.1
5,031,775	-				+1.1
5,031,940	+				-0.4
5,031,980	-				-0.5
5,031,996	+				+1.1
5,031,996	+				+1.1
5,031,996	+				+0.1
5,031,997	-				+0.1
5,031,997	-				+0.1
5,031,997	-				+0.1
5,031,997	-				-0.4
5,031,997	-				-0.4
5,032,076	+		Pf6N2E2_4314	0.17	+0.1
5,032,077	-		Pf6N2E2_4314	0.17	+1.1
5,032,077	-		Pf6N2E2_4314	0.17	+1.1
5,032,077	-		Pf6N2E2_4314	0.17	+0.6
5,032,142	-		Pf6N2E2_4314	0.27	+0.1
5,032,169	+		Pf6N2E2_4314	0.31	-0.5
5,032,194	+		Pf6N2E2_4314	0.35	+0.1
5,032,194	+		Pf6N2E2_4314	0.35	-0.4
5,032,195	-		Pf6N2E2_4314	0.35	+0.1
5,032,240	+		Pf6N2E2_4314	0.42	+1.1
5,032,240	+		Pf6N2E2_4314	0.42	+0.1
5,032,241	-		Pf6N2E2_4314	0.42	+0.7
5,032,241	-		Pf6N2E2_4314	0.42	+1.1
5,032,241	-		Pf6N2E2_4314	0.42	+1.1
5,032,241	-		Pf6N2E2_4314	0.42	-0.4
5,032,242	+		Pf6N2E2_4314	0.42	+1.1
5,032,243	-		Pf6N2E2_4314	0.42	+0.1
5,032,384	-		Pf6N2E2_4314	0.63	+0.4