Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3547

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
4,137,334	+		Pf6N2E2_3546	0.52	-0.3
4,137,335	-		Pf6N2E2_3546	0.52	-0.0
4,137,335	-		Pf6N2E2_3546	0.52	+0.1
4,137,759	-				+1.1
4,137,759	-				+1.1
4,137,977	+				+0.1
4,137,978	-				+0.1
4,137,978	-				+1.1
4,138,182	+				+0.1
4,138,182	+				-0.2
4,138,182	+				-0.7
4,138,214	+				-0.5
4,138,214	+				-0.5
4,138,215	-				-0.3
4,138,215	-				+0.1
4,138,232	+				-1.5
4,138,232	+				+0.1
4,138,233	-				+1.1
4,138,593	+		Pf6N2E2_3547	0.31	+1.1
4,138,594	-		Pf6N2E2_3547	0.31	+1.1
4,138,627	-		Pf6N2E2_3547	0.33	+1.1
4,138,627	-		Pf6N2E2_3547	0.33	+1.1
4,138,671	+		Pf6N2E2_3547	0.37	+1.1
4,138,671	+		Pf6N2E2_3547	0.37	-0.2
4,138,671	+		Pf6N2E2_3547	0.37	+0.1
4,138,707	+		Pf6N2E2_3547	0.40	+1.1
4,138,728	+		Pf6N2E2_3547	0.41	-0.2
4,138,728	+		Pf6N2E2_3547	0.41	+1.1
4,138,729	-		Pf6N2E2_3547	0.42	+1.1
4,138,729	-		Pf6N2E2_3547	0.42	-0.9
4,138,729	-		Pf6N2E2_3547	0.42	+1.1
4,138,735	-		Pf6N2E2_3547	0.42	+1.1
4,138,812	+		Pf6N2E2_3547	0.48	+1.1
4,138,813	-		Pf6N2E2_3547	0.48	+1.1
4,138,836	+		Pf6N2E2_3547	0.50	+1.1
4,138,837	-		Pf6N2E2_3547	0.50	+1.1
4,138,849	+		Pf6N2E2_3547	0.51	-0.5
4,138,929	+		Pf6N2E2_3547	0.57	+1.1
4,138,929	+		Pf6N2E2_3547	0.57	+0.1
4,138,930	-		Pf6N2E2_3547	0.57	+0.1
4,138,930	-		Pf6N2E2_3547	0.57	+1.1
4,138,930	-		Pf6N2E2_3547	0.57	-0.2
4,138,931	+		Pf6N2E2_3547	0.58	+0.1
4,139,056	-		Pf6N2E2_3547	0.67	+0.1
4,139,056	-		Pf6N2E2_3547	0.67	+1.1
4,139,112	+		Pf6N2E2_3547	0.72	-0.9
4,139,112	+		Pf6N2E2_3547	0.72	+1.1
4,139,178	+		Pf6N2E2_3547	0.77	+1.1
4,139,178	+		Pf6N2E2_3547	0.77	-1.0
4,139,178	+		Pf6N2E2_3547	0.77	-0.5
4,139,179	-		Pf6N2E2_3547	0.77	+1.1
4,139,179	-		Pf6N2E2_3547	0.77	+1.1
4,139,179	-		Pf6N2E2_3547	0.77	+0.1
4,139,179	-		Pf6N2E2_3547	0.77	-0.5
4,139,179	-		Pf6N2E2_3547	0.77	-0.4
4,139,179	-		Pf6N2E2_3547	0.77	+0.7
4,139,621	+				+0.1
4,139,621	+				+2.1
4,139,622	-				+1.1
4,139,622	-				-0.5
4,139,622	-				+1.1
4,139,622	-				-0.9
4,139,626	+				+1.1
4,139,626	+				+1.1
4,139,626	+				+0.1
4,139,626	+				-0.5
4,139,627	-				+0.1
4,139,627	-				-0.8
4,139,627	-				+0.1
4,139,627	-				-0.6
4,140,128	-		Pf6N2E2_3548	0.33	+1.1
4,140,368	+		Pf6N2E2_3548	0.49	+0.1
4,140,377	+		Pf6N2E2_3548	0.50	-0.9
4,140,377	+		Pf6N2E2_3548	0.50	+0.1
4,140,377	+		Pf6N2E2_3548	0.50	+0.2
4,140,377	+		Pf6N2E2_3548	0.50	-0.7
4,140,377	+		Pf6N2E2_3548	0.50	+1.1
4,140,377	+		Pf6N2E2_3548	0.50	+1.1
4,140,377	+		Pf6N2E2_3548	0.50	+1.1
4,140,377	+		Pf6N2E2_3548	0.50	-0.7
4,140,377	+		Pf6N2E2_3548	0.50	-0.7
4,140,378	-		Pf6N2E2_3548	0.50	+0.1
4,140,378	-		Pf6N2E2_3548	0.50	+1.1
4,140,378	-		Pf6N2E2_3548	0.50	+1.1
4,140,378	-		Pf6N2E2_3548	0.50	+1.1
4,140,378	-		Pf6N2E2_3548	0.50	+0.7
4,140,378	-		Pf6N2E2_3548	0.50	+1.1
4,140,378	-		Pf6N2E2_3548	0.50	-1.8
4,140,429	-		Pf6N2E2_3548	0.53	+1.1