Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3275

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
3,777,708	+		Pf6N2E2_3273	0.57	-2.4
3,777,709	-		Pf6N2E2_3273	0.58	+1.1
3,777,879	+				-0.8
3,777,879	+				+0.1
3,777,879	+				-0.5
3,777,899	-				-0.6
3,777,964	-				+0.1
3,778,028	+				+1.1
3,778,028	+				+1.1
3,778,029	-				-0.7
3,778,029	-				-0.4
3,778,029	-				-0.5
3,778,029	-				+0.1
3,778,043	+		Pf6N2E2_3274	0.11	-0.5
3,778,044	-		Pf6N2E2_3274	0.12	-1.7
3,778,064	+		Pf6N2E2_3274	0.15	+1.1
3,778,064	+		Pf6N2E2_3274	0.15	+1.1
3,778,065	-		Pf6N2E2_3274	0.15	+0.1
3,778,073	+		Pf6N2E2_3274	0.16	-0.3
3,778,074	-		Pf6N2E2_3274	0.17	-0.6
3,778,074	-		Pf6N2E2_3274	0.17	+0.1
3,778,074	-		Pf6N2E2_3274	0.17	+1.1
3,778,074	-		Pf6N2E2_3274	0.17	+1.1
3,778,076	+		Pf6N2E2_3274	0.17	+0.1
3,778,076	+		Pf6N2E2_3274	0.17	-0.5
3,778,077	-		Pf6N2E2_3274	0.17	+1.1
3,778,077	-		Pf6N2E2_3274	0.17	-0.8
3,778,113	+		Pf6N2E2_3274	0.23	+0.1
3,778,481	+		Pf6N2E2_3274	0.83	+1.1
3,778,481	+		Pf6N2E2_3274	0.83	+1.1
3,778,481	+		Pf6N2E2_3274	0.83	-0.2
3,778,482	-		Pf6N2E2_3274	0.83	-0.5
3,778,482	-		Pf6N2E2_3274	0.83	+1.1
3,778,482	-		Pf6N2E2_3274	0.83	-0.4
3,778,482	-		Pf6N2E2_3274	0.83	-0.6
3,778,482	-		Pf6N2E2_3274	0.83	+1.1
3,778,502	+		Pf6N2E2_3274	0.86	-1.0
3,778,550	+				+1.1
3,778,551	-				+0.3
3,778,575	+				+0.1
3,778,575	+				+0.1
3,778,575	+				-0.6
3,778,670	-		Pf6N2E2_3275	0.19	+0.1
3,778,708	+		Pf6N2E2_3275	0.27	-1.7
3,778,708	+		Pf6N2E2_3275	0.27	+1.1
3,778,708	+		Pf6N2E2_3275	0.27	+1.1
3,778,708	+		Pf6N2E2_3275	0.27	+1.1
3,778,708	+		Pf6N2E2_3275	0.27	+1.1
3,778,708	+		Pf6N2E2_3275	0.27	+1.1
3,778,708	+		Pf6N2E2_3275	0.27	+0.1
3,778,709	-		Pf6N2E2_3275	0.28	-0.5
3,778,709	-		Pf6N2E2_3275	0.28	-1.2
3,778,709	-		Pf6N2E2_3275	0.28	-1.5
3,778,709	-		Pf6N2E2_3275	0.28	+1.1
3,778,948	+		Pf6N2E2_3275	0.82	+0.1
3,778,949	-		Pf6N2E2_3275	0.82	-1.3
3,778,965	+		Pf6N2E2_3275	0.86	+1.1
3,778,966	-		Pf6N2E2_3275	0.86	-0.9
3,779,009	+				+0.1
3,779,009	+				-0.5
3,779,009	+				+0.1
3,779,010	-				-0.5
3,779,010	-				+1.1
3,779,166	-				-0.1
3,779,950	+		Pf6N2E2_3276	0.65	-0.8
3,779,950	+		Pf6N2E2_3276	0.65	-0.5
3,779,950	+		Pf6N2E2_3276	0.65	-0.0
3,779,951	-		Pf6N2E2_3276	0.65	+0.2
3,779,951	-		Pf6N2E2_3276	0.65	+1.1