Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3224

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
3,728,676	+		Pf6N2E2_3222	0.78	+1.1
3,728,676	+		Pf6N2E2_3222	0.78	+0.1
3,728,676	+		Pf6N2E2_3222	0.78	-0.5
3,728,677	-		Pf6N2E2_3222	0.78	+0.1
3,728,677	-		Pf6N2E2_3222	0.78	-1.0
3,728,677	-		Pf6N2E2_3222	0.78	+1.1
3,728,677	-		Pf6N2E2_3222	0.78	-0.7
3,728,720	+		Pf6N2E2_3222	0.84	+0.1
3,728,720	+		Pf6N2E2_3222	0.84	+1.1
3,728,779	+				+1.1
3,728,837	+				+0.1
3,728,876	-				+0.1
3,728,876	-				-0.5
3,729,091	+		Pf6N2E2_3223	0.34	+0.1
3,729,091	+		Pf6N2E2_3223	0.34	+1.1
3,729,091	+		Pf6N2E2_3223	0.34	+1.1
3,729,092	-		Pf6N2E2_3223	0.34	-0.9
3,729,092	-		Pf6N2E2_3223	0.34	-0.4
3,729,092	-		Pf6N2E2_3223	0.34	-0.8
3,729,092	-		Pf6N2E2_3223	0.34	-0.4
3,729,092	-		Pf6N2E2_3223	0.34	-0.9
3,729,158	+		Pf6N2E2_3223	0.45	-0.9
3,729,158	+		Pf6N2E2_3223	0.45	+0.1
3,729,158	+		Pf6N2E2_3223	0.45	+0.2
3,729,159	-		Pf6N2E2_3223	0.45	-0.5
3,729,159	-		Pf6N2E2_3223	0.45	-0.9
3,729,159	-		Pf6N2E2_3223	0.45	+1.1
3,729,302	+		Pf6N2E2_3223	0.68	+1.1
3,729,303	-		Pf6N2E2_3223	0.68	+1.1
3,729,330	+		Pf6N2E2_3223	0.72	+1.1
3,729,331	-		Pf6N2E2_3223	0.72	+1.1
3,729,331	-		Pf6N2E2_3223	0.72	+1.1
3,729,338	-		Pf6N2E2_3223	0.73	+1.1
3,729,507	-				+1.1
3,729,531	+				+1.1
3,729,531	+				+1.1
3,729,531	+				-0.3
3,729,532	-				+0.0
3,729,532	-				-0.5
3,729,532	-				+0.1
3,729,603	+				-1.2
3,729,604	-				+1.1
3,729,635	+				-1.5
3,729,659	+				+0.1
3,729,660	-				+0.1
3,729,660	-				+1.1
3,729,683	-		Pf6N2E2_3224	0.11	+1.1
3,729,712	-		Pf6N2E2_3224	0.18	+1.1
3,729,712	-		Pf6N2E2_3224	0.18	-1.7
3,729,713	+		Pf6N2E2_3224	0.18	+1.1
3,729,713	+		Pf6N2E2_3224	0.18	+0.1
3,729,714	-		Pf6N2E2_3224	0.19	+1.1
3,729,993	+		Pf6N2E2_3224	0.86	+0.1
3,730,103	-				+1.1
3,730,289	+				+1.1
3,730,290	-				+0.5
3,730,290	-				+1.1
3,730,441	-		Pf6N2E2_3225	0.20	+1.1
3,730,441	-		Pf6N2E2_3225	0.20	-1.7
3,730,441	-		Pf6N2E2_3225	0.20	-0.7
3,730,441	-		Pf6N2E2_3225	0.20	-1.5
3,730,441	-		Pf6N2E2_3225	0.20	+0.1
3,730,443	+		Pf6N2E2_3225	0.20	+1.1
3,730,443	+		Pf6N2E2_3225	0.20	-0.5
3,730,443	+		Pf6N2E2_3225	0.20	-0.7
3,730,443	+		Pf6N2E2_3225	0.20	+1.1
3,730,443	+		Pf6N2E2_3225	0.20	+1.1
3,730,443	+		Pf6N2E2_3225	0.20	+1.1
3,730,444	-		Pf6N2E2_3225	0.20	+0.1
3,730,444	-		Pf6N2E2_3225	0.20	+1.1
3,730,444	-		Pf6N2E2_3225	0.20	-1.7
3,730,624	+		Pf6N2E2_3225	0.37	+1.1
3,730,880	-		Pf6N2E2_3225	0.62	-0.5
3,730,951	+		Pf6N2E2_3225	0.68	+1.1