Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1275

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
1,505,300	+				+0.2
1,505,300	+				+0.8
1,505,301	-				+0.8
1,505,451	+				+0.8
1,505,452	-				-0.2
1,505,463	-				+0.8
1,505,538	+				-0.8
1,505,545	+				+0.8
1,505,546	-				-2.5
1,505,546	-				+0.8
1,505,577	+				-0.2
1,505,578	-				-0.2
1,505,700	+		Pf6N2E2_1274	0.30	-0.2
1,506,119	+				+0.8
1,506,120	-				-0.9
1,506,120	-				-0.2
1,506,132	-				-1.9
1,506,436	+		Pf6N2E2_1275	0.39	-0.2
1,506,437	-		Pf6N2E2_1275	0.39	-0.8
1,506,496	-		Pf6N2E2_1275	0.47	+0.6
1,506,496	-		Pf6N2E2_1275	0.47	+0.8
1,506,496	-		Pf6N2E2_1275	0.47	-0.2
1,506,562	+		Pf6N2E2_1275	0.57	-1.0
1,506,562	+		Pf6N2E2_1275	0.57	-0.2
1,506,562	+		Pf6N2E2_1275	0.57	+0.8
1,506,565	+		Pf6N2E2_1275	0.58	-1.5
1,506,565	+		Pf6N2E2_1275	0.58	-0.8
1,506,565	+		Pf6N2E2_1275	0.58	-1.1
1,506,646	+		Pf6N2E2_1275	0.70	+0.8
1,506,646	+		Pf6N2E2_1275	0.70	-2.0
1,506,647	-		Pf6N2E2_1275	0.70	+0.8
1,506,647	-		Pf6N2E2_1275	0.70	+0.8
1,506,647	-		Pf6N2E2_1275	0.70	+0.8
1,506,658	+		Pf6N2E2_1275	0.72	-1.8
1,506,659	-		Pf6N2E2_1275	0.72	+0.8
1,506,740	-		Pf6N2E2_1275	0.84	+0.8
1,506,740	-		Pf6N2E2_1275	0.84	-0.2
1,506,740	-		Pf6N2E2_1275	0.84	-0.8
1,506,761	-		Pf6N2E2_1275	0.87	-0.2
1,506,889	-				+0.8
1,506,889	-				+0.8
1,506,894	+				-1.2
1,506,894	+				-0.2
1,506,895	-				+0.8
1,506,895	-				-0.1
1,506,895	-				+0.8
1,506,897	-				+0.8
1,507,082	-		Pf6N2E2_1276	0.28	-0.8
1,507,136	+		Pf6N2E2_1276	0.39	-0.2
1,507,136	+		Pf6N2E2_1276	0.39	+0.8
1,507,137	-		Pf6N2E2_1276	0.40	-0.2
1,507,137	-		Pf6N2E2_1276	0.40	+0.8
1,507,248	+		Pf6N2E2_1276	0.62	-0.8
1,507,248	+		Pf6N2E2_1276	0.62	+0.8
1,507,248	+		Pf6N2E2_1276	0.62	+0.8
1,507,249	-		Pf6N2E2_1276	0.62	+0.8
1,507,249	-		Pf6N2E2_1276	0.62	+0.8
1,507,317	+		Pf6N2E2_1276	0.76	-0.2
1,507,318	-		Pf6N2E2_1276	0.76	-0.8
1,507,318	-		Pf6N2E2_1276	0.76	-0.9
1,507,424	+				+0.8
1,507,503	+				+0.8
1,507,503	+				+0.8
1,507,504	-				+0.8
1,507,504	-				-0.2
1,507,591	-		Pf6N2E2_1277	0.11	+0.8