Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5962

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
6,779,659	+				-0.0
6,779,851	+		Pf6N2E2_5961	0.23	+1.0
6,779,851	+		Pf6N2E2_5961	0.23	-1.0
6,779,851	+		Pf6N2E2_5961	0.23	-0.0
6,779,851	+		Pf6N2E2_5961	0.23	+1.0
6,779,851	+		Pf6N2E2_5961	0.23	+1.0
6,779,852	-		Pf6N2E2_5961	0.24	+2.0
6,779,853	+		Pf6N2E2_5961	0.24	-0.5
6,779,853	+		Pf6N2E2_5961	0.24	+1.0
6,779,881	+		Pf6N2E2_5961	0.28	-0.6
6,779,881	+		Pf6N2E2_5961	0.28	-2.9
6,779,881	+		Pf6N2E2_5961	0.28	-1.1
6,779,881	+		Pf6N2E2_5961	0.28	-0.6
6,779,881	+		Pf6N2E2_5961	0.28	+1.0
6,779,882	-		Pf6N2E2_5961	0.28	+1.0
6,779,882	-		Pf6N2E2_5961	0.28	+1.0
6,779,882	-		Pf6N2E2_5961	0.28	+1.0
6,779,902	+		Pf6N2E2_5961	0.31	-0.0
6,779,902	+		Pf6N2E2_5961	0.31	+1.0
6,779,974	+		Pf6N2E2_5961	0.43	-0.0
6,779,974	+		Pf6N2E2_5961	0.43	-0.5
6,780,166	+		Pf6N2E2_5961	0.73	-0.6
6,780,175	+		Pf6N2E2_5961	0.74	+1.0
6,780,176	-		Pf6N2E2_5961	0.74	+1.0
6,780,217	+		Pf6N2E2_5961	0.81	+1.6
6,780,217	+		Pf6N2E2_5961	0.81	+1.0
6,780,218	-		Pf6N2E2_5961	0.81	+1.0
6,780,218	-		Pf6N2E2_5961	0.81	-1.0
6,780,370	+				-0.8
6,780,370	+				-0.5
6,780,370	+				-1.1
6,780,388	+				+1.0
6,780,388	+				-0.0
6,780,388	+				-0.5
6,780,389	-				-1.3
6,780,389	-				+1.0
6,780,389	-				-0.6
6,780,389	-				+1.0
6,780,408	+				-0.0
6,780,411	+				-0.4
6,780,411	+				-0.6
6,780,411	+				-1.3
6,780,412	-				+1.0
6,780,413	+				-0.0
6,780,413	+				-0.6
6,780,414	-				+1.0
6,780,414	-				+1.0
6,780,414	-				-0.8
6,780,414	-				+1.0
6,780,448	-				-1.2
6,780,526	-				+1.0
6,780,559	+				+1.0
6,780,559	+				+1.0
6,780,559	+				-0.0
6,780,559	+				+1.6
6,780,560	-				+1.0
6,780,560	-				-1.3
6,780,560	-				-2.6
6,780,567	+				+1.0
6,780,567	+				-0.0
6,780,567	+				+1.0
6,780,567	+				+1.0
6,780,567	+				-0.0
6,780,568	-				+1.0
6,780,568	-				+1.0
6,780,568	-				-1.6
6,780,568	-				-1.8
6,780,568	-				-0.8
6,780,571	+				+1.0
6,780,571	+				-3.3
6,780,571	+				+1.0
6,780,571	+				-1.8
6,780,571	+				-2.9
6,780,571	+				+1.0
6,780,571	+				+1.0
6,780,572	-				-0.0
6,780,649	+		Pf6N2E2_5962	0.16	+1.0
6,780,649	+		Pf6N2E2_5962	0.16	+1.0
6,780,649	+		Pf6N2E2_5962	0.16	-0.0
6,781,012	+		Pf6N2E2_5962	0.54	-2.0
6,781,012	+		Pf6N2E2_5962	0.54	+1.0
6,781,012	+		Pf6N2E2_5962	0.54	-1.6
6,781,013	-		Pf6N2E2_5962	0.54	-0.0
6,781,013	-		Pf6N2E2_5962	0.54	-0.0
6,781,013	-		Pf6N2E2_5962	0.54	-1.3
6,781,030	+		Pf6N2E2_5962	0.55	-2.2
6,781,031	-		Pf6N2E2_5962	0.56	+1.0
6,781,144	+		Pf6N2E2_5962	0.67	+1.0
6,781,144	+		Pf6N2E2_5962	0.67	-2.3
6,781,150	+		Pf6N2E2_5962	0.68	-1.9
6,781,150	+		Pf6N2E2_5962	0.68	+1.0
6,781,151	-		Pf6N2E2_5962	0.68	-2.8
6,781,151	-		Pf6N2E2_5962	0.68	+1.0
6,781,151	-		Pf6N2E2_5962	0.68	+1.0
6,781,179	+		Pf6N2E2_5962	0.71	-0.0
6,781,255	-		Pf6N2E2_5962	0.79	-2.7
6,781,255	-		Pf6N2E2_5962	0.79	+1.0
6,781,464	-				+1.0
6,781,464	-				-0.6
6,781,686	+				+1.0
6,782,443	+				-0.6