Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5910

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
6,728,089	+		Pf6N2E2_5909	0.39	+1.0
6,728,089	+		Pf6N2E2_5909	0.39	-0.0
6,728,089	+		Pf6N2E2_5909	0.39	+1.0
6,728,089	+		Pf6N2E2_5909	0.39	+1.0
6,728,090	-		Pf6N2E2_5909	0.39	-1.0
6,728,090	-		Pf6N2E2_5909	0.39	-0.6
6,728,090	-		Pf6N2E2_5909	0.39	+1.0
6,728,090	-		Pf6N2E2_5909	0.39	-0.8
6,728,090	-		Pf6N2E2_5909	0.39	+1.0
6,728,090	-		Pf6N2E2_5909	0.39	-0.0
6,728,116	+		Pf6N2E2_5909	0.41	-0.0
6,728,116	+		Pf6N2E2_5909	0.41	+1.0
6,728,116	+		Pf6N2E2_5909	0.41	+1.0
6,728,117	-		Pf6N2E2_5909	0.41	+1.0
6,728,117	-		Pf6N2E2_5909	0.41	-0.8
6,728,117	-		Pf6N2E2_5909	0.41	+1.0
6,728,203	+		Pf6N2E2_5909	0.48	+1.0
6,728,204	-		Pf6N2E2_5909	0.48	-0.5
6,728,204	-		Pf6N2E2_5909	0.48	-0.0
6,728,353	+		Pf6N2E2_5909	0.59	-0.4
6,728,374	+		Pf6N2E2_5909	0.61	-0.6
6,728,617	+		Pf6N2E2_5909	0.79	+1.0
6,728,618	-		Pf6N2E2_5909	0.79	-0.6
6,728,618	-		Pf6N2E2_5909	0.79	+1.0
6,728,654	-		Pf6N2E2_5909	0.82	+1.0
6,728,698	+		Pf6N2E2_5909	0.85	-1.0
6,728,698	+		Pf6N2E2_5909	0.85	-0.4
6,728,719	+		Pf6N2E2_5909	0.87	-0.6
6,728,720	-		Pf6N2E2_5909	0.87	-1.1
6,728,720	-		Pf6N2E2_5909	0.87	+1.0
6,728,720	-		Pf6N2E2_5909	0.87	-0.5
6,728,720	-		Pf6N2E2_5909	0.87	+1.0
6,728,720	-		Pf6N2E2_5909	0.87	+1.0
6,728,737	+		Pf6N2E2_5909	0.88	+1.0
6,728,737	+		Pf6N2E2_5909	0.88	+1.0
6,728,737	+		Pf6N2E2_5909	0.88	-1.3
6,728,737	+		Pf6N2E2_5909	0.88	-0.0
6,728,737	+		Pf6N2E2_5909	0.88	-0.0
6,728,737	+		Pf6N2E2_5909	0.88	+0.4
6,728,738	-		Pf6N2E2_5909	0.88	-0.2
6,728,738	-		Pf6N2E2_5909	0.88	+1.0
6,728,738	-		Pf6N2E2_5909	0.88	+1.0
6,728,738	-		Pf6N2E2_5909	0.88	-0.0
6,728,812	+				+1.0
6,728,869	+				-0.6
6,728,869	+				+0.2
6,728,869	+				-1.3
6,728,869	+				+1.0
6,728,869	+				-0.7
6,728,869	+				-0.6
6,728,870	-				+1.0
6,728,870	-				-1.3
6,728,870	-				-0.6
6,728,870	-				+1.0
6,728,922	+				-0.0
6,728,922	+				+1.0
6,728,923	-				-0.1
6,729,156	-		Pf6N2E2_5910	0.24	-3.2
6,729,644	+		Pf6N2E2_5910	0.89	-0.0
6,729,645	-		Pf6N2E2_5910	0.89	-0.0
6,729,782	+				+1.0
6,729,782	+				+1.0
6,729,782	+				+1.0
6,729,782	+				+1.0
6,729,783	-				+1.0
6,729,837	+				-1.6
6,729,837	+				+1.0
6,729,837	+				-0.0
6,729,837	+				-1.6
6,729,837	+				-0.6
6,729,837	+				-0.6
6,729,838	-				+1.0
6,729,838	-				-0.6
6,730,131	-		Pf6N2E2_5911	0.28	-0.0
6,730,145	+		Pf6N2E2_5911	0.29	+1.0
6,730,145	+		Pf6N2E2_5911	0.29	+1.0
6,730,146	-		Pf6N2E2_5911	0.29	+1.0
6,730,146	-		Pf6N2E2_5911	0.29	-0.6
6,730,169	+		Pf6N2E2_5911	0.31	+1.0
6,730,169	+		Pf6N2E2_5911	0.31	+1.0
6,730,170	-		Pf6N2E2_5911	0.31	-0.0
6,730,170	-		Pf6N2E2_5911	0.31	-0.6
6,730,170	-		Pf6N2E2_5911	0.31	-0.0
6,730,170	-		Pf6N2E2_5911	0.31	-1.3
6,730,170	-		Pf6N2E2_5911	0.31	+1.0
6,730,173	+		Pf6N2E2_5911	0.31	+1.0
6,730,174	-		Pf6N2E2_5911	0.31	+1.0
6,730,193	+		Pf6N2E2_5911	0.33	-0.6
6,730,193	+		Pf6N2E2_5911	0.33	+1.0
6,730,193	+		Pf6N2E2_5911	0.33	+1.0
6,730,552	+		Pf6N2E2_5911	0.59	+1.0
6,730,552	+		Pf6N2E2_5911	0.59	-0.0
6,730,552	+		Pf6N2E2_5911	0.59	+0.6
6,730,553	-		Pf6N2E2_5911	0.59	+1.0
6,730,553	-		Pf6N2E2_5911	0.59	+0.7
6,730,555	+		Pf6N2E2_5911	0.59	-1.3
6,730,567	+		Pf6N2E2_5911	0.60	+0.7
6,730,567	+		Pf6N2E2_5911	0.60	-0.1
6,730,585	+		Pf6N2E2_5911	0.61	+1.0
6,730,601	+		Pf6N2E2_5911	0.63	-0.0
6,730,601	+		Pf6N2E2_5911	0.63	-0.0
6,730,601	+		Pf6N2E2_5911	0.63	+1.0
6,730,601	+		Pf6N2E2_5911	0.63	-0.5
6,730,601	+		Pf6N2E2_5911	0.63	-0.5
6,730,602	-		Pf6N2E2_5911	0.63	-0.6
6,730,602	-		Pf6N2E2_5911	0.63	+1.0
6,730,602	-		Pf6N2E2_5911	0.63	+1.0
6,730,673	+		Pf6N2E2_5911	0.68	+1.0
6,730,674	-		Pf6N2E2_5911	0.68	-0.0
6,730,674	-		Pf6N2E2_5911	0.68	+1.0
6,730,700	+		Pf6N2E2_5911	0.70	-1.0
6,730,700	+		Pf6N2E2_5911	0.70	-0.5
6,730,701	-		Pf6N2E2_5911	0.70	-0.6