Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5837

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
6,653,733	-		Pf6N2E2_5836	0.58	-0.0
6,653,733	-		Pf6N2E2_5836	0.58	+1.0
6,653,733	-		Pf6N2E2_5836	0.58	+1.0
6,653,738	+		Pf6N2E2_5836	0.58	+1.0
6,653,738	+		Pf6N2E2_5836	0.58	-0.9
6,653,738	+		Pf6N2E2_5836	0.58	-1.0
6,653,738	+		Pf6N2E2_5836	0.58	-0.0
6,653,738	+		Pf6N2E2_5836	0.58	-1.2
6,653,738	+		Pf6N2E2_5836	0.58	-0.8
6,653,738	+		Pf6N2E2_5836	0.58	-0.0
6,653,739	-		Pf6N2E2_5836	0.58	+1.0
6,653,739	-		Pf6N2E2_5836	0.58	+1.0
6,653,739	-		Pf6N2E2_5836	0.58	+1.0
6,653,739	-		Pf6N2E2_5836	0.58	-1.7
6,653,739	-		Pf6N2E2_5836	0.58	-0.9
6,653,740	+		Pf6N2E2_5836	0.58	-0.0
6,654,188	+				-1.5
6,654,188	+				-0.0
6,654,188	+				-1.5
6,654,188	+				-0.0
6,654,188	+				+1.0
6,654,188	+				+1.0
6,654,189	-				-0.6
6,654,189	-				-2.5
6,654,292	-				+1.0
6,654,295	-				-0.0
6,654,363	+				-0.4
6,654,363	+				+1.0
6,654,363	+				+1.0
6,654,364	-				+1.0
6,654,364	-				+0.6
6,654,364	-				-0.3
6,654,364	-				-0.0
6,654,364	-				-0.6
6,654,364	-				+1.0
6,654,364	-				-1.6
6,654,364	-				-0.0
6,654,392	-				-1.1
6,654,392	-				+1.0
6,654,481	+		Pf6N2E2_5837	0.13	+1.0
6,655,272	+				+1.0
6,655,272	+				-0.0
6,655,272	+				-0.0
6,655,272	+				-2.9
6,655,273	-				+1.0
6,655,273	-				+1.0
6,655,491	+				-6.2
6,655,491	+				-1.3
6,655,492	-				+1.0
6,655,551	+		Pf6N2E2_5838	0.15	+1.0
6,655,552	-		Pf6N2E2_5838	0.16	-0.0
6,655,552	-		Pf6N2E2_5838	0.16	+1.0
6,655,674	+		Pf6N2E2_5838	0.31	-0.6
6,655,674	+		Pf6N2E2_5838	0.31	-0.0
6,655,674	+		Pf6N2E2_5838	0.31	-1.3
6,655,675	-		Pf6N2E2_5838	0.31	-0.0
6,655,675	-		Pf6N2E2_5838	0.31	+1.0
6,655,675	-		Pf6N2E2_5838	0.31	-0.6
6,655,683	+		Pf6N2E2_5838	0.32	+1.0
6,655,684	-		Pf6N2E2_5838	0.32	+1.0
6,655,752	+		Pf6N2E2_5838	0.41	-0.0
6,655,752	+		Pf6N2E2_5838	0.41	-2.3
6,655,752	+		Pf6N2E2_5838	0.41	-0.0
6,655,753	-		Pf6N2E2_5838	0.41	+1.0
6,655,830	+		Pf6N2E2_5838	0.51	+1.0
6,655,830	+		Pf6N2E2_5838	0.51	-0.6
6,655,830	+		Pf6N2E2_5838	0.51	-0.0
6,656,094	+		Pf6N2E2_5838	0.85	-6.6
6,656,094	+		Pf6N2E2_5838	0.85	+1.0
6,656,094	+		Pf6N2E2_5838	0.85	+1.0
6,656,094	+		Pf6N2E2_5838	0.85	-0.0
6,656,094	+		Pf6N2E2_5838	0.85	+1.0
6,656,095	-		Pf6N2E2_5838	0.85	+1.0
6,656,095	-		Pf6N2E2_5838	0.85	+1.0
6,656,112	+		Pf6N2E2_5838	0.87	-1.0
6,656,112	+		Pf6N2E2_5838	0.87	-0.6
6,656,113	-		Pf6N2E2_5838	0.87	+1.0
6,656,113	-		Pf6N2E2_5838	0.87	-0.0
6,656,223	+				+1.0
6,656,223	+				+1.0
6,656,223	+				-0.0
6,656,223	+				-3.9
6,656,224	-				-0.0
6,656,224	-				+0.6
6,656,224	-				-0.6
6,656,224	-				+1.0
6,656,233	+				-0.0
6,656,233	+				-0.6
6,656,234	-				-0.6
6,656,234	-				+1.0
6,656,234	-				+1.0