Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5805

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
6,621,367	+		Pf6N2E2_5803	0.71	-0.0
6,621,368	-		Pf6N2E2_5803	0.71	-1.3
6,621,368	-		Pf6N2E2_5803	0.71	-0.0
6,621,371	+		Pf6N2E2_5803	0.71	+1.0
6,621,372	-		Pf6N2E2_5803	0.71	+1.0
6,621,639	+				+1.0
6,621,646	+				-3.2
6,621,646	+				-4.6
6,621,647	-				+1.0
6,621,647	-				-1.0
6,621,647	-				+1.0
6,621,673	+				+1.0
6,621,673	+				-0.0
6,621,673	+				+1.0
6,621,674	-				-0.0
6,621,676	+				-3.2
6,621,676	+				-0.6
6,621,676	+				+1.0
6,621,676	+				+1.0
6,621,677	-				+1.0
6,621,677	-				-1.3
6,621,677	-				+1.0
6,621,677	-				-0.0
6,621,677	-				-0.5
6,621,840	+		Pf6N2E2_5804	0.25	+1.0
6,621,877	+		Pf6N2E2_5804	0.32	+1.0
6,621,877	+		Pf6N2E2_5804	0.32	-0.0
6,621,877	+		Pf6N2E2_5804	0.32	-1.8
6,621,878	-		Pf6N2E2_5804	0.32	+1.0
6,622,153	+		Pf6N2E2_5804	0.86	-0.0
6,622,154	-		Pf6N2E2_5804	0.86	+1.0
6,622,257	+				-0.6
6,622,288	+				+1.0
6,622,332	+		Pf6N2E2_5805	0.12	+1.0
6,622,332	+		Pf6N2E2_5805	0.12	-0.0
6,622,333	-		Pf6N2E2_5805	0.12	-0.6
6,622,435	-		Pf6N2E2_5805	0.23	+1.0
6,622,496	+		Pf6N2E2_5805	0.29	-2.0
6,622,497	-		Pf6N2E2_5805	0.29	+1.0
6,622,497	-		Pf6N2E2_5805	0.29	+1.0
6,622,522	+		Pf6N2E2_5805	0.32	+1.0
6,622,582	-		Pf6N2E2_5805	0.38	-3.5
6,622,599	+		Pf6N2E2_5805	0.40	+1.0
6,622,600	-		Pf6N2E2_5805	0.40	+1.0
6,622,600	-		Pf6N2E2_5805	0.40	-0.0
6,622,600	-		Pf6N2E2_5805	0.40	-0.0
6,622,600	-		Pf6N2E2_5805	0.40	+1.0
6,622,615	-		Pf6N2E2_5805	0.42	-5.6
6,622,615	-		Pf6N2E2_5805	0.42	-0.0
6,622,674	+		Pf6N2E2_5805	0.48	-2.0
6,622,761	+		Pf6N2E2_5805	0.57	+1.0
6,622,761	+		Pf6N2E2_5805	0.57	+1.0
6,622,761	+		Pf6N2E2_5805	0.57	-0.0
6,622,761	+		Pf6N2E2_5805	0.57	+1.0
6,622,761	+		Pf6N2E2_5805	0.57	+1.0
6,622,761	+		Pf6N2E2_5805	0.57	-0.0
6,622,761	+		Pf6N2E2_5805	0.57	-0.0
6,622,761	+		Pf6N2E2_5805	0.57	+1.0
6,622,761	+		Pf6N2E2_5805	0.57	+1.0
6,622,762	-		Pf6N2E2_5805	0.57	-0.6
6,622,762	-		Pf6N2E2_5805	0.57	-0.0
6,622,762	-		Pf6N2E2_5805	0.57	+1.0
6,622,762	-		Pf6N2E2_5805	0.57	+1.0
6,622,762	-		Pf6N2E2_5805	0.57	+1.0
6,623,218	+				+1.0
6,623,218	+				-2.7
6,623,218	+				+1.0
6,623,219	-				+1.0
6,623,272	-		Pf6N2E2_5806	0.35	-0.0
6,623,316	-		Pf6N2E2_5806	0.60	+1.0
6,623,316	-		Pf6N2E2_5806	0.60	-0.0
6,623,348	-		Pf6N2E2_5806	0.78	-1.3
6,623,367	+		Pf6N2E2_5806	0.89	-0.0
6,623,384	+				-0.0
6,623,428	-				-0.0
6,623,592	+				-0.6
6,623,592	+				+1.0
6,623,593	-				+1.0
6,623,650	+		Pf6N2E2_5807	0.20	-0.0
6,623,740	-		Pf6N2E2_5807	0.46	-1.8
6,623,743	+		Pf6N2E2_5807	0.47	-0.0
6,623,743	+		Pf6N2E2_5807	0.47	+1.0
6,623,743	+		Pf6N2E2_5807	0.47	-1.0
6,623,744	-		Pf6N2E2_5807	0.47	-0.0
6,623,759	-		Pf6N2E2_5807	0.51	+1.0
6,623,786	-		Pf6N2E2_5807	0.59	-0.6
6,623,875	+		Pf6N2E2_5807	0.84	-1.8
6,623,876	-		Pf6N2E2_5807	0.84	-0.6
6,623,902	+				-1.3
6,623,903	-				+1.0
6,623,909	-				+1.0
6,623,917	+				+1.0
6,623,917	+				+1.0
6,623,918	-				-5.4
6,623,918	-				+1.0
6,623,918	-				-6.3
6,623,918	-				-0.0
6,624,025	+				+0.4
6,624,029	+				-0.5
6,624,030	-				-0.0
6,624,030	-				+0.1
6,624,030	-				-1.1