Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5717

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
6,530,650	+		Pf6N2E2_5715	0.44	+1.0
6,530,827	+				+1.0
6,530,828	-				-0.0
6,530,828	-				+1.0
6,530,867	-				+1.0
6,530,879	-				-0.8
6,530,883	+				-0.0
6,530,883	+				-0.3
6,530,883	+				+1.0
6,530,883	+				-0.0
6,530,883	+				+1.0
6,530,883	+				+0.6
6,530,884	-				-0.0
6,530,884	-				-0.0
6,530,884	-				-0.0
6,530,884	-				-0.5
6,530,994	-				+1.0
6,531,031	-		Pf6N2E2_5716	0.15	-0.0
6,531,099	+		Pf6N2E2_5716	0.29	+1.0
6,531,099	+		Pf6N2E2_5716	0.29	+1.0
6,531,099	+		Pf6N2E2_5716	0.29	+0.1
6,531,327	+		Pf6N2E2_5716	0.78	-1.5
6,531,327	+		Pf6N2E2_5716	0.78	-0.5
6,531,327	+		Pf6N2E2_5716	0.78	-0.0
6,531,327	+		Pf6N2E2_5716	0.78	+1.0
6,531,327	+		Pf6N2E2_5716	0.78	+1.0
6,531,327	+		Pf6N2E2_5716	0.78	+1.0
6,531,327	+		Pf6N2E2_5716	0.78	-0.0
6,531,328	-		Pf6N2E2_5716	0.78	+1.0
6,531,328	-		Pf6N2E2_5716	0.78	+1.0
6,531,328	-		Pf6N2E2_5716	0.78	-0.6
6,531,328	-		Pf6N2E2_5716	0.78	+1.0
6,531,328	-		Pf6N2E2_5716	0.78	-0.5
6,531,328	-		Pf6N2E2_5716	0.78	-1.3
6,531,328	-		Pf6N2E2_5716	0.78	+1.0
6,531,328	-		Pf6N2E2_5716	0.78	-0.0
6,531,328	-		Pf6N2E2_5716	0.78	+0.3
6,531,501	+				+1.0
6,531,502	-				+1.0
6,531,502	-				-0.0
6,531,502	-				+1.0
6,531,502	-				+1.0
6,531,502	-				-0.0
6,531,645	+		Pf6N2E2_5717	0.13	+1.0
6,531,645	+		Pf6N2E2_5717	0.13	-0.0
6,531,645	+		Pf6N2E2_5717	0.13	-1.5
6,531,646	-		Pf6N2E2_5717	0.14	+1.0
6,531,646	-		Pf6N2E2_5717	0.14	+1.0
6,531,789	-		Pf6N2E2_5717	0.49	+1.0
6,531,868	+		Pf6N2E2_5717	0.68	-0.0
6,531,868	+		Pf6N2E2_5717	0.68	+1.0
6,531,869	-		Pf6N2E2_5717	0.69	-0.6
6,531,907	+		Pf6N2E2_5717	0.78	-0.0
6,531,907	+		Pf6N2E2_5717	0.78	+1.0
6,531,908	-		Pf6N2E2_5717	0.78	-0.0
6,531,908	-		Pf6N2E2_5717	0.78	-1.3
6,531,908	-		Pf6N2E2_5717	0.78	+1.0
6,531,908	-		Pf6N2E2_5717	0.78	-0.0
6,531,917	+		Pf6N2E2_5717	0.80	-0.0
6,531,918	-		Pf6N2E2_5717	0.81	+1.0
6,531,918	-		Pf6N2E2_5717	0.81	-1.5
6,531,931	-		Pf6N2E2_5717	0.84	-0.0
6,531,931	-		Pf6N2E2_5717	0.84	-0.9
6,531,931	-		Pf6N2E2_5717	0.84	+1.0
6,531,931	-		Pf6N2E2_5717	0.84	+1.0
6,532,442	+				-0.0
6,532,442	+				+1.0
6,532,443	-				-0.0
6,532,452	-				+1.0
6,532,456	+				+1.0
6,532,456	+				+1.0
6,532,456	+				-0.0
6,532,457	-				-4.0
6,532,457	-				-0.3
6,532,485	+				+1.0
6,532,741	+				-1.3
6,532,742	-				+1.0
6,532,976	+		Pf6N2E2_5719	0.21	+1.0
6,532,976	+		Pf6N2E2_5719	0.21	+1.0