Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5617

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
6,432,784	+		Pf6N2E2_5616	0.25	-0.7
6,432,785	-		Pf6N2E2_5616	0.25	-0.6
6,432,785	-		Pf6N2E2_5616	0.25	+0.2
6,433,235	-		Pf6N2E2_5616	0.66	-0.9
6,433,235	-		Pf6N2E2_5616	0.66	-0.0
6,433,253	+		Pf6N2E2_5616	0.68	-0.6
6,433,254	-		Pf6N2E2_5616	0.68	+1.0
6,433,273	+		Pf6N2E2_5616	0.69	+1.0
6,433,274	-		Pf6N2E2_5616	0.70	+1.0
6,433,339	+		Pf6N2E2_5616	0.76	-2.0
6,433,339	+		Pf6N2E2_5616	0.76	+1.0
6,433,340	-		Pf6N2E2_5616	0.76	-0.6
6,433,471	+		Pf6N2E2_5616	0.88	-0.0
6,433,704	+				-0.0
6,433,705	-				+1.0
6,433,705	-				+1.0
6,433,705	-				-1.0
6,433,705	-				-1.0
6,433,705	-				+1.0
6,433,798	-		Pf6N2E2_5617	0.18	-0.0
6,433,798	-		Pf6N2E2_5617	0.18	-1.3
6,434,193	+		Pf6N2E2_5617	0.55	-0.9
6,434,193	+		Pf6N2E2_5617	0.55	-1.9
6,434,193	+		Pf6N2E2_5617	0.55	-0.0
6,434,193	+		Pf6N2E2_5617	0.55	-0.0
6,434,194	-		Pf6N2E2_5617	0.55	+1.0
6,434,194	-		Pf6N2E2_5617	0.55	+2.0
6,434,194	-		Pf6N2E2_5617	0.55	+1.0
6,434,194	-		Pf6N2E2_5617	0.55	+1.0
6,434,247	+		Pf6N2E2_5617	0.60	-0.8
6,434,247	+		Pf6N2E2_5617	0.60	-0.0
6,434,247	+		Pf6N2E2_5617	0.60	+1.0
6,434,247	+		Pf6N2E2_5617	0.60	-0.0
6,434,247	+		Pf6N2E2_5617	0.60	+1.0
6,434,247	+		Pf6N2E2_5617	0.60	-1.3
6,434,247	+		Pf6N2E2_5617	0.60	-0.0
6,434,247	+		Pf6N2E2_5617	0.60	-0.6
6,434,247	+		Pf6N2E2_5617	0.60	-2.5
6,434,247	+		Pf6N2E2_5617	0.60	+1.0
6,434,247	+		Pf6N2E2_5617	0.60	-0.6
6,434,553	+		Pf6N2E2_5617	0.89	-0.0
6,434,553	+		Pf6N2E2_5617	0.89	-0.0
6,434,553	+		Pf6N2E2_5617	0.89	-0.6
6,434,553	+		Pf6N2E2_5617	0.89	+0.4
6,434,554	-		Pf6N2E2_5617	0.89	+1.0
6,434,554	-		Pf6N2E2_5617	0.89	-0.0
6,434,554	-		Pf6N2E2_5617	0.89	-0.0
6,434,554	-		Pf6N2E2_5617	0.89	+1.0
6,434,705	-				-0.8
6,435,037	+		Pf6N2E2_5618	0.23	-0.0
6,435,037	+		Pf6N2E2_5618	0.23	-0.3
6,435,037	+		Pf6N2E2_5618	0.23	-0.4
6,435,037	+		Pf6N2E2_5618	0.23	+1.0
6,435,038	-		Pf6N2E2_5618	0.23	-0.3
6,435,038	-		Pf6N2E2_5618	0.23	-0.3
6,435,038	-		Pf6N2E2_5618	0.23	+1.0
6,435,148	+		Pf6N2E2_5618	0.31	+1.0
6,435,148	+		Pf6N2E2_5618	0.31	-0.6
6,435,148	+		Pf6N2E2_5618	0.31	+1.0
6,435,148	+		Pf6N2E2_5618	0.31	-0.6
6,435,148	+		Pf6N2E2_5618	0.31	-1.3
6,435,148	+		Pf6N2E2_5618	0.31	-0.8
6,435,148	+		Pf6N2E2_5618	0.31	-0.6
6,435,148	+		Pf6N2E2_5618	0.31	-0.6
6,435,149	-		Pf6N2E2_5618	0.31	+0.5
6,435,541	+		Pf6N2E2_5618	0.59	+1.0
6,435,542	-		Pf6N2E2_5618	0.59	+1.0
6,435,554	+		Pf6N2E2_5618	0.60	+0.4
6,435,576	+		Pf6N2E2_5618	0.61	+1.0
6,435,576	+		Pf6N2E2_5618	0.61	+1.0
6,435,576	+		Pf6N2E2_5618	0.61	-0.5
6,435,577	-		Pf6N2E2_5618	0.61	-0.0
6,435,577	-		Pf6N2E2_5618	0.61	+1.0
6,435,577	-		Pf6N2E2_5618	0.61	+1.0
6,435,623	-		Pf6N2E2_5618	0.64	-0.6