Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5344

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
6,136,704	-		Pf6N2E2_5342	0.47	+1.0
6,136,704	-		Pf6N2E2_5342	0.47	+1.0
6,136,704	-		Pf6N2E2_5342	0.47	+0.0
6,137,611	-				+0.1
6,137,611	-				+1.0
6,137,611	-				+1.0
6,137,611	-				-1.8
6,137,611	-				+0.0
6,137,611	-				+1.0
6,137,615	-				+1.0
6,137,814	-		Pf6N2E2_5344	0.31	-1.0
6,137,884	-		Pf6N2E2_5344	0.50	+0.0
6,137,912	-		Pf6N2E2_5344	0.58	+0.1
6,137,912	-		Pf6N2E2_5344	0.58	-1.0
6,137,915	-		Pf6N2E2_5344	0.59	+0.0
6,137,915	-		Pf6N2E2_5344	0.59	+1.0
6,137,915	-		Pf6N2E2_5344	0.59	-1.0
6,137,915	-		Pf6N2E2_5344	0.59	-0.4
6,137,915	-		Pf6N2E2_5344	0.59	-0.2
6,137,915	-		Pf6N2E2_5344	0.59	+0.4
6,137,920	-		Pf6N2E2_5344	0.60	+1.0
6,137,920	-		Pf6N2E2_5344	0.60	+0.0
6,138,132	+				-1.6
6,138,237	+				-0.6
6,138,237	+				+1.0
6,138,250	+		Pf6N2E2_5345	0.10	-2.3
6,138,250	+		Pf6N2E2_5345	0.10	+0.0
6,138,370	+		Pf6N2E2_5345	0.17	-2.0
6,138,371	-		Pf6N2E2_5345	0.17	-0.6
6,138,416	-		Pf6N2E2_5345	0.19	-1.0
6,138,436	+		Pf6N2E2_5345	0.21	-2.2
6,138,437	-		Pf6N2E2_5345	0.21	+1.0
6,138,847	+		Pf6N2E2_5345	0.43	+1.0
6,138,847	+		Pf6N2E2_5345	0.43	+1.0
6,138,847	+		Pf6N2E2_5345	0.43	+0.0
6,138,848	-		Pf6N2E2_5345	0.43	-0.6
6,138,848	-		Pf6N2E2_5345	0.43	+1.0
6,138,848	-		Pf6N2E2_5345	0.43	-1.2
6,138,996	+		Pf6N2E2_5345	0.51	-0.6
6,138,997	+		Pf6N2E2_5345	0.52	+1.0
6,138,997	+		Pf6N2E2_5345	0.52	+0.0
6,138,998	-		Pf6N2E2_5345	0.52	-0.6
6,139,043	-		Pf6N2E2_5345	0.54	+0.0
6,139,043	-		Pf6N2E2_5345	0.54	+0.0