Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5024

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
5,788,752	-				+0.1
5,788,752	-				-0.4
5,789,010	-		Pf6N2E2_5023	0.41	-1.5
5,789,010	-		Pf6N2E2_5023	0.41	+0.1
5,789,010	-		Pf6N2E2_5023	0.41	+0.1
5,789,309	-		Pf6N2E2_5023	0.89	-1.7
5,789,309	-		Pf6N2E2_5023	0.89	+0.1
5,789,309	-		Pf6N2E2_5023	0.89	-1.5
5,789,309	-		Pf6N2E2_5023	0.89	-1.9
5,789,313	-		Pf6N2E2_5023	0.90	+1.1
5,789,313	-		Pf6N2E2_5023	0.90	+1.1
5,789,313	-		Pf6N2E2_5023	0.90	-0.5
5,789,313	-		Pf6N2E2_5023	0.90	+1.1
5,789,358	-				-1.2
5,789,369	-				+0.5
5,789,480	-		Pf6N2E2_5024	0.12	+1.1
5,789,480	-		Pf6N2E2_5024	0.12	+0.1
5,789,573	-		Pf6N2E2_5024	0.25	-1.9
5,789,598	-		Pf6N2E2_5024	0.28	+0.1
5,790,111	-				+0.1
5,790,182	-				-0.5
5,790,182	-				-0.2
5,790,182	-				-0.5
5,790,182	-				+1.1
5,790,182	-				-1.2
5,790,182	-				+0.5
5,790,186	-				+0.1
5,790,186	-				+0.1
5,790,186	-				-2.0
5,790,186	-				-0.5
5,790,205	-				+1.1
5,790,237	+				+1.1
5,790,237	+				+0.1
5,790,241	-				+1.1
5,790,241	-				+1.1
5,790,241	-				-0.3
5,790,253	+				+0.1
5,790,253	+				+0.1
5,790,253	+				+1.1
5,790,253	+				-0.3
5,790,253	+				+1.1
5,790,253	+				-0.0
5,790,254	-				-0.5
5,790,254	-				+0.3
5,790,254	-				+1.1
5,790,254	-				+1.1
5,790,254	-				+1.1
5,790,254	-				+1.1
5,790,254	-				+0.1
5,790,254	-				-0.3
5,790,254	-				+0.1
5,790,255	+				+1.1
5,790,255	+				+1.1
5,790,255	+				-0.6
5,790,256	-				+1.1
5,790,256	-				+0.1
5,790,256	-				+1.1
5,790,266	+				+0.1
5,790,266	+				+1.1
5,790,267	-				-0.5
5,790,267	-				+0.4
5,790,283	+				+1.1
5,790,284	-				+1.1
5,790,284	-				-0.2
5,790,346	+				+0.1
5,790,375	-				+0.1
5,790,457	+				+1.1
5,790,457	+				+1.1
5,790,462	+				-0.5
5,790,462	+				+0.1
5,790,462	+				+0.2
5,790,463	-				+0.1
5,790,463	-				-1.9
5,790,463	-				+0.7
5,790,481	+				+0.1
5,790,488	+				+0.3
5,790,489	-				+1.1
5,790,500	+				+1.1
5,790,501	-				-1.2
5,790,506	+				+1.1
5,790,559	+				+0.1
5,790,559	+				+0.1
5,790,560	-				-0.6
5,790,560	-				-0.5
5,790,560	-				-0.0
5,790,568	+				+1.1
5,790,569	-				+0.1
5,790,569	-				+0.1
5,790,693	+				+0.2
5,790,693	+				+0.1
5,790,693	+				+0.1
5,790,693	+				+1.1
5,790,694	-				+1.1
5,790,834	+		Pf6N2E2_5025	0.11	+0.1
5,790,835	-		Pf6N2E2_5025	0.11	+1.1
5,790,883	+		Pf6N2E2_5025	0.13	+0.1
5,790,883	+		Pf6N2E2_5025	0.13	+1.1
5,790,883	+		Pf6N2E2_5025	0.13	-0.5
5,790,883	+		Pf6N2E2_5025	0.13	+1.1
5,790,884	-		Pf6N2E2_5025	0.14	+0.1
5,790,884	-		Pf6N2E2_5025	0.14	-0.7
5,790,884	-		Pf6N2E2_5025	0.14	+1.1
5,790,973	+		Pf6N2E2_5025	0.17	-0.5
5,790,973	+		Pf6N2E2_5025	0.17	-0.9
5,790,974	-		Pf6N2E2_5025	0.17	-0.5
5,790,974	-		Pf6N2E2_5025	0.17	+1.1
5,790,974	-		Pf6N2E2_5025	0.17	+1.1
5,790,974	-		Pf6N2E2_5025	0.17	+1.1
5,790,974	-		Pf6N2E2_5025	0.17	+2.1
5,791,018	+		Pf6N2E2_5025	0.19	+1.1
5,791,018	+		Pf6N2E2_5025	0.19	+0.1
5,791,108	+		Pf6N2E2_5025	0.23	+1.1
5,791,108	+		Pf6N2E2_5025	0.23	-0.4
5,791,108	+		Pf6N2E2_5025	0.23	+0.1
5,791,108	+		Pf6N2E2_5025	0.23	-0.7
5,791,108	+		Pf6N2E2_5025	0.23	+1.1
5,791,108	+		Pf6N2E2_5025	0.23	-0.5
5,791,108	+		Pf6N2E2_5025	0.23	-1.6
5,791,108	+		Pf6N2E2_5025	0.23	+1.1
5,791,108	+		Pf6N2E2_5025	0.23	-0.3
5,791,108	+		Pf6N2E2_5025	0.23	+0.1
5,791,108	+		Pf6N2E2_5025	0.23	-1.2
5,791,108	+		Pf6N2E2_5025	0.23	+0.1
5,791,108	+		Pf6N2E2_5025	0.23	+1.1
5,791,108	+		Pf6N2E2_5025	0.23	+0.1
5,791,109	-		Pf6N2E2_5025	0.23	-0.6
5,791,109	-		Pf6N2E2_5025	0.23	+0.1
5,791,109	-		Pf6N2E2_5025	0.23	+1.1
5,791,109	-		Pf6N2E2_5025	0.23	+1.1
5,791,109	-		Pf6N2E2_5025	0.23	-0.5
5,791,109	-		Pf6N2E2_5025	0.23	+1.1
5,791,109	-		Pf6N2E2_5025	0.23	+0.1
5,791,109	-		Pf6N2E2_5025	0.23	+1.1
5,791,109	-		Pf6N2E2_5025	0.23	-0.6
5,791,109	-		Pf6N2E2_5025	0.23	-0.9
5,791,109	-		Pf6N2E2_5025	0.23	-1.2
5,791,109	-		Pf6N2E2_5025	0.23	+0.1
5,791,109	-		Pf6N2E2_5025	0.23	-0.5
5,791,109	-		Pf6N2E2_5025	0.23	-0.5
5,791,109	-		Pf6N2E2_5025	0.23	+0.1
5,791,109	-		Pf6N2E2_5025	0.23	+1.1
5,791,109	-		Pf6N2E2_5025	0.23	+0.1
5,791,109	-		Pf6N2E2_5025	0.23	+1.1
5,791,109	-		Pf6N2E2_5025	0.23	+1.1
5,791,109	-		Pf6N2E2_5025	0.23	+1.1
5,791,109	-		Pf6N2E2_5025	0.23	+0.1
5,791,112	+		Pf6N2E2_5025	0.23	+0.1
5,791,112	+		Pf6N2E2_5025	0.23	-0.5
5,791,112	+		Pf6N2E2_5025	0.23	+0.1
5,791,113	-		Pf6N2E2_5025	0.23	-0.5
5,791,113	-		Pf6N2E2_5025	0.23	+0.1