Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5013

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
5,779,033	-				+1.1
5,779,181	+				+1.1
5,779,181	+				+1.1
5,779,182	-				+1.1
5,779,182	-				-0.5
5,779,182	-				+1.1
5,779,182	-				+0.3
5,779,207	+				-0.4
5,779,207	+				+0.1
5,779,208	-				+0.1
5,779,208	-				-1.2
5,779,346	-		Pf6N2E2_5012	0.37	+0.1
5,779,399	-		Pf6N2E2_5012	0.54	-1.4
5,779,399	-		Pf6N2E2_5012	0.54	+0.1
5,779,418	+		Pf6N2E2_5012	0.60	+1.1
5,779,418	+		Pf6N2E2_5012	0.60	+0.1
5,779,419	-		Pf6N2E2_5012	0.60	-0.7
5,779,419	-		Pf6N2E2_5012	0.60	-0.7
5,779,444	+		Pf6N2E2_5012	0.68	+0.1
5,779,444	+		Pf6N2E2_5012	0.68	-0.3
5,779,508	+		Pf6N2E2_5012	0.88	-0.9
5,779,519	+				+0.1
5,779,520	-				+0.1
5,779,520	-				+0.1
5,779,520	-				+0.1
5,779,545	+				-0.5
5,779,545	+				-0.5
5,779,545	+				+0.1
5,779,546	-				-0.9
5,779,546	-				+0.1
5,779,546	-				-0.5
5,779,623	-				-0.9
5,779,637	+				-0.6
5,779,637	+				+1.1
5,779,637	+				+1.1
5,779,637	+				-0.5
5,779,637	+				-0.7
5,779,637	+				+1.1
5,779,637	+				+1.1
5,779,637	+				+1.1
5,779,637	+				-2.7
5,779,637	+				+1.1
5,779,637	+				-0.8
5,779,637	+				+1.1
5,779,638	-				-0.5
5,779,638	-				+0.1
5,779,638	-				+1.1
5,779,638	-				-0.5
5,779,638	-				+0.1
5,779,638	-				-0.5
5,779,638	-				-0.5
5,779,638	-				-0.7
5,779,664	-				-0.7
5,779,682	+				-0.5
5,779,682	+				-0.5
5,779,682	+				-0.4
5,779,682	+				+1.1
5,779,683	-				+0.1
5,779,683	-				-0.1
5,779,683	-				+1.1
5,779,683	-				+1.1
5,779,956	+		Pf6N2E2_5013	0.40	-0.5
5,779,956	+		Pf6N2E2_5013	0.40	+0.1
5,780,044	+		Pf6N2E2_5013	0.52	-0.9
5,780,130	+		Pf6N2E2_5013	0.63	-1.1
5,780,404	+				-1.7
5,780,405	-				+1.1
5,780,434	+				-1.5
5,780,453	+				+0.1
5,780,548	+				-1.1
5,780,549	-				+1.1
5,780,549	-				+0.8
5,781,087	-		Pf6N2E2_5014	0.33	+1.1