Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4826

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
5,580,081	+		Pf6N2E2_4825	0.25	+1.1
5,580,081	+		Pf6N2E2_4825	0.25	+0.1
5,580,208	+		Pf6N2E2_4825	0.37	+1.1
5,580,208	+		Pf6N2E2_4825	0.37	+1.1
5,580,208	+		Pf6N2E2_4825	0.37	+0.1
5,580,208	+		Pf6N2E2_4825	0.37	-5.4
5,580,209	-		Pf6N2E2_4825	0.38	+0.1
5,580,209	-		Pf6N2E2_4825	0.38	-2.1
5,580,243	+		Pf6N2E2_4825	0.41	+1.1
5,580,288	+		Pf6N2E2_4825	0.45	+1.1
5,580,363	+		Pf6N2E2_4825	0.52	-2.4
5,580,363	+		Pf6N2E2_4825	0.52	+1.1
5,580,363	+		Pf6N2E2_4825	0.52	-0.5
5,580,392	+		Pf6N2E2_4825	0.55	+1.1
5,580,393	-		Pf6N2E2_4825	0.55	+1.1
5,580,516	+		Pf6N2E2_4825	0.67	-0.5
5,580,517	-		Pf6N2E2_4825	0.67	+1.1
5,580,517	-		Pf6N2E2_4825	0.67	+0.1
5,580,517	-		Pf6N2E2_4825	0.67	+1.1
5,580,517	-		Pf6N2E2_4825	0.67	-0.9
5,580,556	+		Pf6N2E2_4825	0.71	-0.9
5,580,582	+		Pf6N2E2_4825	0.73	-3.5
5,580,728	-		Pf6N2E2_4825	0.87	-2.2
5,580,728	-		Pf6N2E2_4825	0.87	+0.1
5,580,831	+				+0.1
5,580,831	+				+0.1
5,580,831	+				+0.1
5,580,831	+				-0.9
5,580,831	+				+1.1
5,580,832	-				-0.5
5,580,832	-				-1.2
5,580,839	+				+1.1
5,580,839	+				-2.5
5,580,840	-				-0.5
5,580,966	-		Pf6N2E2_4826	0.13	-0.5
5,581,113	+		Pf6N2E2_4826	0.30	+1.1
5,581,130	+		Pf6N2E2_4826	0.32	-0.5
5,581,130	+		Pf6N2E2_4826	0.32	-7.7
5,581,130	+		Pf6N2E2_4826	0.32	+1.1
5,581,182	+		Pf6N2E2_4826	0.38	+0.1
5,581,584	+		Pf6N2E2_4826	0.86	-2.4
5,581,584	+		Pf6N2E2_4826	0.86	+1.1
5,581,584	+		Pf6N2E2_4826	0.86	-0.5
5,581,584	+		Pf6N2E2_4826	0.86	-0.9
5,581,584	+		Pf6N2E2_4826	0.86	-0.9
5,581,584	+		Pf6N2E2_4826	0.86	+0.1
5,581,584	+		Pf6N2E2_4826	0.86	-0.5
5,581,584	+		Pf6N2E2_4826	0.86	+0.1
5,581,584	+		Pf6N2E2_4826	0.86	-1.7
5,581,867	-		Pf6N2E2_4827	0.24	+1.1
5,581,879	+		Pf6N2E2_4827	0.25	+1.1
5,581,959	-		Pf6N2E2_4827	0.37	+1.7
5,581,971	+		Pf6N2E2_4827	0.38	-0.2
5,581,971	+		Pf6N2E2_4827	0.38	-0.1
5,581,972	-		Pf6N2E2_4827	0.39	-0.5
5,581,972	-		Pf6N2E2_4827	0.39	+1.1
5,581,972	-		Pf6N2E2_4827	0.39	-0.2
5,582,006	+		Pf6N2E2_4827	0.43	-0.7
5,582,367	+				+1.1
5,582,650	+		Pf6N2E2_4828	0.39	+2.1
5,582,650	+		Pf6N2E2_4828	0.39	+0.1
5,582,651	-		Pf6N2E2_4828	0.39	+0.1
5,582,651	-		Pf6N2E2_4828	0.39	+0.1
5,582,651	-		Pf6N2E2_4828	0.39	+1.1
5,582,685	-		Pf6N2E2_4828	0.44	+1.1
5,582,685	-		Pf6N2E2_4828	0.44	-0.5
5,582,685	-		Pf6N2E2_4828	0.44	+1.1
5,582,685	-		Pf6N2E2_4828	0.44	+1.1
5,582,688	+		Pf6N2E2_4828	0.45	+1.1
5,582,688	+		Pf6N2E2_4828	0.45	-2.4
5,582,689	-		Pf6N2E2_4828	0.45	+0.1
5,582,689	-		Pf6N2E2_4828	0.45	-0.4