Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4771

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
5,510,515	+		Pf6N2E2_4769	0.88	+1.1
5,510,515	+		Pf6N2E2_4769	0.88	+0.1
5,510,515	+		Pf6N2E2_4769	0.88	+1.1
5,510,515	+		Pf6N2E2_4769	0.88	+1.1
5,510,516	-		Pf6N2E2_4769	0.88	-0.4
5,510,516	-		Pf6N2E2_4769	0.88	-0.5
5,510,542	+		Pf6N2E2_4769	0.89	-0.3
5,510,543	-		Pf6N2E2_4769	0.89	+1.1
5,510,543	-		Pf6N2E2_4769	0.89	-0.5
5,510,548	+		Pf6N2E2_4769	0.90	-0.9
5,510,548	+		Pf6N2E2_4769	0.90	+0.1
5,510,548	+		Pf6N2E2_4769	0.90	+1.5
5,510,548	+		Pf6N2E2_4769	0.90	-0.1
5,510,548	+		Pf6N2E2_4769	0.90	-0.2
5,510,548	+		Pf6N2E2_4769	0.90	+0.3
5,510,548	+		Pf6N2E2_4769	0.90	+0.1
5,510,548	+		Pf6N2E2_4769	0.90	-0.5
5,510,548	+		Pf6N2E2_4769	0.90	+0.1
5,510,548	+		Pf6N2E2_4769	0.90	-0.2
5,510,548	+		Pf6N2E2_4769	0.90	+1.1
5,510,548	+		Pf6N2E2_4769	0.90	-0.3
5,510,548	+		Pf6N2E2_4769	0.90	-0.5
5,510,548	+		Pf6N2E2_4769	0.90	+0.1
5,510,548	+		Pf6N2E2_4769	0.90	-0.9
5,510,548	+		Pf6N2E2_4769	0.90	+0.8
5,510,549	-		Pf6N2E2_4769	0.90	+0.1
5,510,549	-				+1.1
5,510,549	-		Pf6N2E2_4769	0.90	-0.9
5,510,549	-		Pf6N2E2_4769	0.90	-0.4
5,510,549	-		Pf6N2E2_4769	0.90	-2.7
5,510,549	-		Pf6N2E2_4769	0.90	+0.1
5,510,549	-		Pf6N2E2_4769	0.90	+0.5
5,510,549	-		Pf6N2E2_4769	0.90	+1.1
5,510,549	-		Pf6N2E2_4769	0.90	+0.7
5,510,549	-		Pf6N2E2_4769	0.90	-0.9
5,510,549	-		Pf6N2E2_4769	0.90	-0.5
5,510,549	-		Pf6N2E2_4769	0.90	+1.1
5,510,549	-		Pf6N2E2_4769	0.90	+1.1
5,510,549	-		Pf6N2E2_4769	0.90	+0.1
5,510,606	-				+1.1
5,510,635	+				-1.6
5,510,635	+				+1.1
5,510,635	+				+1.1
5,510,635	+				-1.4
5,510,636	-				+1.1
5,510,636	-				+0.4
5,510,659	-				+0.1
5,510,728	+				-2.4
5,510,728	+				+0.7
5,510,728	+				-0.5
5,510,757	+				-0.0
5,510,757	+				-0.1
5,510,806	+				+1.1
5,510,807	-				-0.5
5,510,811	+				-1.2
5,510,811	+				+1.1
5,510,811	+				-1.9
5,510,811	+				+1.1
5,510,811	+				-1.2
5,510,811	+				+1.1
5,510,812	-				+0.1
5,510,812	-				-0.5
5,510,812	-				-0.4
5,510,812	-				+0.1
5,510,812	-				-0.7
5,510,846	+				+1.1
5,510,862	+				+1.1
5,510,862	+				-0.6
5,510,862	+				-0.5
5,510,862	+				+0.3
5,510,862	+				-0.1
5,510,863	-				+1.1
5,510,863	-				+1.1
5,510,863	-				+0.1
5,511,037	+				+1.3
5,511,037	+				-0.5
5,511,037	+				-0.5
5,511,037	+				-0.7
5,511,037	+				-0.5
5,511,037	+				-0.5
5,511,037	+				-0.2
5,511,037	+				+0.1
5,511,037	+				+0.1
5,511,038	-				+1.1
5,511,038	-				-0.1
5,511,038	-				-0.0
5,511,038	-				+1.1
5,511,038	-				+1.1
5,511,038	-				+1.1
5,511,038	-				+1.1
5,511,038	-				+1.1
5,511,038	-				+0.2
5,511,038	-				+0.3
5,511,038	-				+1.1
5,511,039	+				-0.9
5,511,040	-				-0.5
5,511,090	+				-0.8
5,511,090	+				-0.5
5,511,090	+				-0.3
5,511,090	+				-0.5
5,511,091	-				-0.3
5,511,091	-				+0.3
5,511,091	-				-0.5
5,511,091	-				+1.7
5,511,096	+		Pf6N2E2_4770	0.13	+0.1
5,511,187	+		Pf6N2E2_4770	0.70	+1.1
5,511,187	+		Pf6N2E2_4770	0.70	+0.1
5,511,188	-		Pf6N2E2_4770	0.70	+1.1
5,511,188	-		Pf6N2E2_4770	0.70	-0.4
5,511,188	-		Pf6N2E2_4770	0.70	+1.1
5,511,214	+		Pf6N2E2_4770	0.87	+1.1
5,511,214	+		Pf6N2E2_4770	0.87	+0.1
5,511,214	+		Pf6N2E2_4770	0.87	+0.4
5,511,214	+		Pf6N2E2_4770	0.87	-0.5
5,511,214	+		Pf6N2E2_4770	0.87	+1.1
5,511,214	+		Pf6N2E2_4770	0.87	-0.3
5,511,214	+		Pf6N2E2_4770	0.87	+0.3
5,511,214	+		Pf6N2E2_4770	0.87	+1.1
5,511,214	+		Pf6N2E2_4770	0.87	+1.1
5,511,215	-		Pf6N2E2_4770	0.87	+0.1
5,511,215	-		Pf6N2E2_4770	0.87	+1.1
5,511,215	-		Pf6N2E2_4770	0.87	+0.1
5,511,250	+				-1.7
5,511,250	+				+1.1
5,511,250	+				-0.1
5,511,251	-				+1.1
5,511,251	-				+1.1
5,511,365	+				-1.1
5,511,463	-				+0.8
5,511,463	-				+1.1
5,511,465	+				+1.1
5,511,465	+				+1.1
5,511,465	+				+0.1
5,511,465	+				-0.9
5,511,466	-				+1.1
5,511,466	-				-0.5
5,511,466	-				-1.2
5,511,466	-				+0.1
5,511,466	-				+0.1
5,511,497	+				-0.2
5,511,497	+				+1.1
5,511,497	+				+0.2
5,511,498	-				+0.1
5,511,498	-				-0.5
5,511,531	-				+1.1
5,511,661	-		Pf6N2E2_4771	0.16	-0.5
5,511,661	-		Pf6N2E2_4771	0.16	-0.5
5,511,717	+		Pf6N2E2_4771	0.19	+0.1
5,511,717	+		Pf6N2E2_4771	0.19	+0.1
5,511,718	-		Pf6N2E2_4771	0.19	+0.1
5,511,718	-		Pf6N2E2_4771	0.19	+0.1
5,511,772	+		Pf6N2E2_4771	0.22	+1.1
5,511,772	+		Pf6N2E2_4771	0.22	-1.5
5,511,772	+		Pf6N2E2_4771	0.22	+0.1
5,511,772	+		Pf6N2E2_4771	0.22	-0.5
5,511,772	+		Pf6N2E2_4771	0.22	-0.2
5,511,772	+		Pf6N2E2_4771	0.22	+0.1
5,511,772	+		Pf6N2E2_4771	0.22	+1.1
5,511,772	+		Pf6N2E2_4771	0.22	+1.1
5,511,772	+		Pf6N2E2_4771	0.22	+0.1
5,511,772	+		Pf6N2E2_4771	0.22	+1.1
5,511,772	+		Pf6N2E2_4771	0.22	-1.5
5,511,773	-		Pf6N2E2_4771	0.22	+0.1
5,511,773	-		Pf6N2E2_4771	0.22	+1.1
5,511,773	-		Pf6N2E2_4771	0.22	-1.5
5,511,773	-		Pf6N2E2_4771	0.22	-0.9
5,511,773	-		Pf6N2E2_4771	0.22	-0.5
5,511,773	-		Pf6N2E2_4771	0.22	+2.1
5,511,773	-		Pf6N2E2_4771	0.22	+0.1
5,511,773	-		Pf6N2E2_4771	0.22	+1.1
5,511,773	-		Pf6N2E2_4771	0.22	+1.1
5,511,773	-		Pf6N2E2_4771	0.22	-0.5
5,511,773	-		Pf6N2E2_4771	0.22	+1.1
5,511,773	-		Pf6N2E2_4771	0.22	-0.1
5,511,773	-		Pf6N2E2_4771	0.22	-0.5
5,511,773	-		Pf6N2E2_4771	0.22	+1.1
5,511,774	+		Pf6N2E2_4771	0.23	-2.6
5,511,774	+		Pf6N2E2_4771	0.23	-0.8
5,511,775	-		Pf6N2E2_4771	0.23	+1.1
5,511,840	+		Pf6N2E2_4771	0.26	+1.1
5,511,840	+		Pf6N2E2_4771	0.26	+0.1
5,511,841	-		Pf6N2E2_4771	0.26	+0.1
5,511,841	-		Pf6N2E2_4771	0.26	+0.1
5,511,907	-		Pf6N2E2_4771	0.30	-1.5
5,511,919	-		Pf6N2E2_4771	0.30	-1.7
5,512,189	+		Pf6N2E2_4771	0.45	+1.1
5,512,189	+		Pf6N2E2_4771	0.45	-1.6
5,512,189	+		Pf6N2E2_4771	0.45	-1.2
5,512,189	+		Pf6N2E2_4771	0.45	+1.1
5,512,245	+		Pf6N2E2_4771	0.48	-0.1
5,512,245	+		Pf6N2E2_4771	0.48	-1.2
5,512,245	+		Pf6N2E2_4771	0.48	+1.1
5,512,246	-		Pf6N2E2_4771	0.48	+0.1
5,512,371	+		Pf6N2E2_4771	0.55	+1.1
5,512,371	+		Pf6N2E2_4771	0.55	+0.1
5,512,371	+		Pf6N2E2_4771	0.55	-0.5
5,512,371	+		Pf6N2E2_4771	0.55	+1.1
5,512,372	-		Pf6N2E2_4771	0.55	-0.9
5,512,372	-		Pf6N2E2_4771	0.55	-1.2
5,512,372	-		Pf6N2E2_4771	0.55	-0.9
5,512,372	-		Pf6N2E2_4771	0.55	+0.1
5,512,478	+		Pf6N2E2_4771	0.61	+1.1
5,512,478	+		Pf6N2E2_4771	0.61	+0.1
5,512,479	-		Pf6N2E2_4771	0.61	+1.1
5,512,518	+		Pf6N2E2_4771	0.63	+0.1
5,512,519	-		Pf6N2E2_4771	0.63	-0.9
5,512,811	+		Pf6N2E2_4771	0.79	-0.5
5,512,811	+		Pf6N2E2_4771	0.79	-1.2
5,512,899	+		Pf6N2E2_4771	0.84	+0.1
5,512,900	-		Pf6N2E2_4771	0.84	+0.1
5,512,900	-		Pf6N2E2_4771	0.84	-0.5
5,512,900	-		Pf6N2E2_4771	0.84	+0.4
5,512,974	+		Pf6N2E2_4771	0.88	-0.9
5,512,974	+		Pf6N2E2_4771	0.88	+0.1
5,512,975	-		Pf6N2E2_4771	0.88	+1.1
5,512,975	-		Pf6N2E2_4771	0.88	+0.5
5,513,578	+		Pf6N2E2_4772	0.36	-1.2
5,513,578	+		Pf6N2E2_4772	0.36	+0.1
5,513,578	+		Pf6N2E2_4772	0.36	-0.5
5,513,578	+		Pf6N2E2_4772	0.36	+1.1
5,513,578	+		Pf6N2E2_4772	0.36	+1.1
5,513,578	+		Pf6N2E2_4772	0.36	+1.1
5,513,667	+		Pf6N2E2_4772	0.44	+0.1
5,513,722	+		Pf6N2E2_4772	0.48	+0.3
5,513,722	+		Pf6N2E2_4772	0.48	+0.1
5,514,028	+		Pf6N2E2_4772	0.74	+1.1
5,514,028	+		Pf6N2E2_4772	0.74	+1.1
5,514,028	+		Pf6N2E2_4772	0.74	+0.4
5,514,029	-		Pf6N2E2_4772	0.75	+0.1
5,514,029	-		Pf6N2E2_4772	0.75	-1.1
5,514,029	-		Pf6N2E2_4772	0.75	+1.1
5,514,029	-		Pf6N2E2_4772	0.75	-0.5
5,514,029	-		Pf6N2E2_4772	0.75	+0.2