Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4644

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
5,373,255	+		Pf6N2E2_4643	0.72	-0.0
5,373,346	-		Pf6N2E2_4643	0.78	-0.5
5,373,346	-		Pf6N2E2_4643	0.78	+1.1
5,373,391	-		Pf6N2E2_4643	0.80	+1.1
5,373,435	+		Pf6N2E2_4643	0.83	+0.1
5,373,491	+		Pf6N2E2_4643	0.86	+1.1
5,373,630	+				+1.1
5,373,678	+				-1.0
5,373,678	+				+0.1
5,373,679	-				+0.1
5,373,679	-				-0.5
5,373,679	-				+0.1
5,373,762	+				-0.7
5,373,762	+				-1.1
5,373,762	+				-0.5
5,373,762	+				-0.4
5,373,763	-				+1.1
5,373,763	-				-0.6
5,373,763	-				+0.1
5,373,774	-				-1.1
5,373,786	-				-1.2
5,373,786	-				-0.5
5,373,786	-				+0.1
5,373,897	+				+0.1
5,373,898	-				+0.1
5,373,898	-				+1.1
5,373,898	-				+0.1
5,373,943	-				-0.8
5,373,964	+				+1.1
5,373,988	+				-0.2
5,373,988	+				-0.9
5,373,996	-				+1.1
5,373,996	-				+0.1
5,373,996	-				+1.1
5,374,083	+				+0.6
5,374,109	-				-0.4
5,374,141	-				+0.1
5,374,229	+				-0.6
5,374,230	-				+0.0
5,374,230	-				+1.1
5,374,230	-				+1.1
5,374,230	-				+1.1
5,374,548	+		Pf6N2E2_4644	0.31	+0.1
5,374,690	+		Pf6N2E2_4644	0.43	-0.5
5,374,690	+		Pf6N2E2_4644	0.43	+1.1
5,374,690	+		Pf6N2E2_4644	0.43	-0.1
5,374,690	+		Pf6N2E2_4644	0.43	-2.2
5,374,690	+		Pf6N2E2_4644	0.43	-0.3
5,374,690	+		Pf6N2E2_4644	0.43	+1.1
5,374,690	+		Pf6N2E2_4644	0.43	+1.1
5,374,691	-		Pf6N2E2_4644	0.43	+0.1
5,374,691	-		Pf6N2E2_4644	0.43	+0.1
5,374,691	-		Pf6N2E2_4644	0.43	+0.2
5,374,691	-		Pf6N2E2_4644	0.43	+1.1
5,374,691	-		Pf6N2E2_4644	0.43	-0.5
5,374,691	-		Pf6N2E2_4644	0.43	+1.1
5,374,699	-		Pf6N2E2_4644	0.44	+0.4
5,374,749	+		Pf6N2E2_4644	0.48	+1.1
5,374,749	+		Pf6N2E2_4644	0.48	+1.1
5,374,750	-		Pf6N2E2_4644	0.48	-0.9
5,374,750	-		Pf6N2E2_4644	0.48	-0.1
5,374,750	-		Pf6N2E2_4644	0.48	-0.0
5,374,750	-		Pf6N2E2_4644	0.48	+1.1
5,374,750	-		Pf6N2E2_4644	0.48	+1.1
5,374,750	-		Pf6N2E2_4644	0.48	+0.1
5,375,081	-		Pf6N2E2_4644	0.77	+0.1
5,375,081	-		Pf6N2E2_4644	0.77	+0.1
5,375,081	-		Pf6N2E2_4644	0.77	-0.1
5,375,212	+		Pf6N2E2_4644	0.88	+1.1
5,375,277	+				+1.1
5,375,278	-				+1.1
5,375,278	-				-0.4
5,375,370	+				-0.1
5,375,371	-				+0.1
5,375,394	+				+0.1
5,375,394	+				+0.1
5,375,394	+				-0.4
5,375,394	+				+1.1
5,375,394	+				-0.5
5,375,394	+				+0.1
5,375,394	+				-1.4
5,375,394	+				-0.9
5,375,394	+				-0.5
5,375,395	-				+1.1
5,375,395	-				-0.6
5,375,395	-				+1.7
5,375,395	-				+0.1
5,375,395	-				+1.1
5,375,441	+				-0.0
5,375,442	-				-0.0
5,375,449	+				-0.4
5,375,450	-				-1.1
5,375,450	-				-1.2
5,375,450	-				-0.2
5,375,450	-				+1.1
5,375,450	-				+0.1
5,375,450	-				-0.2
5,375,455	+				+1.1
5,375,456	-				+1.1
5,375,456	-				+1.1
5,375,489	+				+1.1
5,375,489	+				+1.1
5,375,489	+				+0.4
5,375,489	+				-0.5
5,375,489	+				-1.2
5,375,490	-				+0.4
5,375,490	-				-0.4
5,375,490	-				-0.2
5,375,490	-				-1.5
5,375,490	-				+0.1
5,375,491	+				-0.5
5,375,491	+				-0.7
5,375,492	-				+1.1
5,375,599	+				-0.9
5,375,599	+				-0.5
5,375,600	-				+1.1
5,375,600	-				+1.1
5,376,011	+		Pf6N2E2_4645	0.56	+0.0
5,376,011	+		Pf6N2E2_4645	0.56	-0.5
5,376,011	+		Pf6N2E2_4645	0.56	-1.1
5,376,011	+		Pf6N2E2_4645	0.56	+1.1
5,376,011	+		Pf6N2E2_4645	0.56	+1.1
5,376,012	-		Pf6N2E2_4645	0.56	-0.1
5,376,118	-		Pf6N2E2_4645	0.69	+1.1
5,376,192	+		Pf6N2E2_4645	0.77	+0.1
5,376,192	+		Pf6N2E2_4645	0.77	+0.1
5,376,200	+		Pf6N2E2_4645	0.78	-0.9
5,376,299	+				+0.1
5,376,300	-				-1.2
5,376,300	-				+0.1
5,376,300	-				+1.1