Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4235

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
4,925,682	+				-0.6
4,925,682	+				+0.1
4,925,876	+		Pf6N2E2_4234	0.19	-0.9
4,925,876	+		Pf6N2E2_4234	0.19	-0.5
4,925,876	+		Pf6N2E2_4234	0.19	+0.1
4,925,877	-		Pf6N2E2_4234	0.19	-0.9
4,926,047	+		Pf6N2E2_4234	0.38	+1.1
4,926,047	+		Pf6N2E2_4234	0.38	-1.0
4,926,047	+		Pf6N2E2_4234	0.38	-0.5
4,926,048	-		Pf6N2E2_4234	0.38	+1.1
4,926,048	-		Pf6N2E2_4234	0.38	+0.1
4,926,189	+		Pf6N2E2_4234	0.53	+1.1
4,926,190	-		Pf6N2E2_4234	0.53	+0.1
4,926,190	-		Pf6N2E2_4234	0.53	-0.5
4,926,431	+		Pf6N2E2_4234	0.80	+0.1
4,926,431	+		Pf6N2E2_4234	0.80	-0.8
4,926,431	+		Pf6N2E2_4234	0.80	+1.1
4,926,432	-		Pf6N2E2_4234	0.80	-0.5
4,926,745	-		Pf6N2E2_4235	0.13	-1.2
4,926,754	+		Pf6N2E2_4235	0.14	+1.1
4,926,955	+		Pf6N2E2_4235	0.43	+0.1
4,926,956	-		Pf6N2E2_4235	0.43	+0.1
4,926,956	-		Pf6N2E2_4235	0.43	+0.1
4,926,970	+		Pf6N2E2_4235	0.45	+0.1
4,926,970	+		Pf6N2E2_4235	0.45	-0.1
4,926,971	-		Pf6N2E2_4235	0.45	+1.1
4,926,971	-		Pf6N2E2_4235	0.45	+1.1
4,926,971	-		Pf6N2E2_4235	0.45	-0.7
4,927,088	+		Pf6N2E2_4235	0.61	-0.5
4,927,088	+		Pf6N2E2_4235	0.61	+0.3
4,927,088	+		Pf6N2E2_4235	0.61	-0.9
4,927,089	-		Pf6N2E2_4235	0.61	+1.1
4,927,089	-		Pf6N2E2_4235	0.61	-0.5
4,927,089	-		Pf6N2E2_4235	0.61	-0.9
4,927,102	+		Pf6N2E2_4235	0.63	-1.2
4,927,102	+		Pf6N2E2_4235	0.63	+0.1
4,927,103	-		Pf6N2E2_4235	0.63	+0.1
4,927,177	+		Pf6N2E2_4235	0.74	-3.0
4,927,177	+		Pf6N2E2_4235	0.74	-2.2
4,927,178	-		Pf6N2E2_4235	0.74	+1.1
4,927,178	-		Pf6N2E2_4235	0.74	-0.3
4,927,178	-		Pf6N2E2_4235	0.74	+1.1
4,927,178	-		Pf6N2E2_4235	0.74	+0.1
4,927,178	-		Pf6N2E2_4235	0.74	+0.1
4,927,225	+		Pf6N2E2_4235	0.81	-0.5
4,927,225	+		Pf6N2E2_4235	0.81	-0.5
4,927,225	+		Pf6N2E2_4235	0.81	-0.2
4,927,225	+		Pf6N2E2_4235	0.81	-1.5
4,927,225	+		Pf6N2E2_4235	0.81	-0.5
4,927,226	-		Pf6N2E2_4235	0.81	-2.0
4,927,226	-		Pf6N2E2_4235	0.81	-0.9
4,927,226	-		Pf6N2E2_4235	0.81	-0.5
4,927,226	-		Pf6N2E2_4235	0.81	-0.3
4,927,226	-		Pf6N2E2_4235	0.81	-0.9
4,927,226	-		Pf6N2E2_4235	0.81	-0.7
4,927,226	-		Pf6N2E2_4235	0.81	+1.1
4,927,226	-		Pf6N2E2_4235	0.81	+0.1
4,927,267	+		Pf6N2E2_4235	0.86	-0.8
4,927,267	+		Pf6N2E2_4235	0.86	+1.1
4,927,268	-		Pf6N2E2_4235	0.87	+1.1
4,927,268	-		Pf6N2E2_4235	0.87	-0.2
4,927,268	-		Pf6N2E2_4235	0.87	-0.4
4,927,268	-		Pf6N2E2_4235	0.87	-0.9
4,927,268	-		Pf6N2E2_4235	0.87	-0.1
4,927,372	+				+1.1
4,927,372	+				-0.5
4,927,416	-				+1.1
4,927,416	-				-0.5
4,927,448	+				+1.1
4,927,448	+				+0.1
4,927,449	-				-0.3
4,927,449	-				+1.1
4,927,449	-				-0.6
4,927,600	+		Pf6N2E2_4236	0.17	-0.5
4,927,600	+		Pf6N2E2_4236	0.17	-0.6
4,927,600	+		Pf6N2E2_4236	0.17	-1.5
4,927,601	-		Pf6N2E2_4236	0.17	+0.3
4,927,631	+		Pf6N2E2_4236	0.20	-0.5
4,927,631	+		Pf6N2E2_4236	0.20	-0.5
4,927,631	+		Pf6N2E2_4236	0.20	-0.5
4,927,631	+		Pf6N2E2_4236	0.20	+1.1
4,927,631	+		Pf6N2E2_4236	0.20	+0.1
4,927,631	+		Pf6N2E2_4236	0.20	+1.1
4,927,631	+		Pf6N2E2_4236	0.20	-0.3
4,927,632	-		Pf6N2E2_4236	0.20	+1.1
4,927,632	-		Pf6N2E2_4236	0.20	-1.2
4,927,745	+		Pf6N2E2_4236	0.30	+1.1
4,927,746	-		Pf6N2E2_4236	0.30	-1.7
4,927,746	-		Pf6N2E2_4236	0.30	+0.1
4,927,746	-		Pf6N2E2_4236	0.30	-0.1
4,927,925	+		Pf6N2E2_4236	0.46	-1.6
4,927,925	+		Pf6N2E2_4236	0.46	+0.1
4,927,925	+		Pf6N2E2_4236	0.46	-0.9
4,927,925	+		Pf6N2E2_4236	0.46	-1.2
4,927,925	+		Pf6N2E2_4236	0.46	-1.2
4,927,925	+		Pf6N2E2_4236	0.46	-0.6
4,927,926	-		Pf6N2E2_4236	0.46	+0.4
4,927,926	-		Pf6N2E2_4236	0.46	-0.7
4,927,928	+		Pf6N2E2_4236	0.46	+1.1
4,928,034	-		Pf6N2E2_4236	0.55	+0.1
4,928,082	+		Pf6N2E2_4236	0.60	+0.1
4,928,090	+		Pf6N2E2_4236	0.60	-0.5
4,928,090	+		Pf6N2E2_4236	0.60	+1.1
4,928,090	+		Pf6N2E2_4236	0.60	+0.1
4,928,090	+		Pf6N2E2_4236	0.60	-0.5
4,928,090	+		Pf6N2E2_4236	0.60	+1.1
4,928,090	+		Pf6N2E2_4236	0.60	+1.1
4,928,090	+		Pf6N2E2_4236	0.60	+1.1
4,928,091	-		Pf6N2E2_4236	0.60	+0.1
4,928,091	-		Pf6N2E2_4236	0.60	+1.1
4,928,091	-		Pf6N2E2_4236	0.60	+1.1
4,928,091	-		Pf6N2E2_4236	0.60	-0.4
4,928,091	-		Pf6N2E2_4236	0.60	-1.2
4,928,091	-		Pf6N2E2_4236	0.60	-0.2
4,928,091	-		Pf6N2E2_4236	0.60	-2.7
4,928,091	-		Pf6N2E2_4236	0.60	-0.5
4,928,091	-		Pf6N2E2_4236	0.60	+0.1
4,928,091	-		Pf6N2E2_4236	0.60	-0.5
4,928,196	-		Pf6N2E2_4236	0.70	+1.1
4,928,196	-		Pf6N2E2_4236	0.70	-1.2
4,928,207	+		Pf6N2E2_4236	0.71	-0.4
4,928,207	+		Pf6N2E2_4236	0.71	-0.8
4,928,208	-		Pf6N2E2_4236	0.71	+1.1
4,928,267	+		Pf6N2E2_4236	0.76	+1.1
4,928,267	+		Pf6N2E2_4236	0.76	-1.1
4,928,267	+		Pf6N2E2_4236	0.76	+0.1
4,928,321	+		Pf6N2E2_4236	0.81	-1.5
4,928,321	+		Pf6N2E2_4236	0.81	-0.3
4,928,321	+		Pf6N2E2_4236	0.81	+1.1
4,928,344	+		Pf6N2E2_4236	0.83	-0.5
4,928,344	+		Pf6N2E2_4236	0.83	-1.5
4,928,345	-		Pf6N2E2_4236	0.83	-0.4