Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4143

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
4,822,365	+		Pf6N2E2_4142	0.18	+0.0
4,822,365	+		Pf6N2E2_4142	0.18	+0.1
4,822,366	-		Pf6N2E2_4142	0.18	-1.0
4,822,366	-		Pf6N2E2_4142	0.18	-2.5
4,822,366	-		Pf6N2E2_4142	0.18	+0.1
4,822,366	-		Pf6N2E2_4142	0.18	+1.1
4,822,366	-		Pf6N2E2_4142	0.18	+0.3
4,822,366	-		Pf6N2E2_4142	0.18	+1.1
4,822,366	-		Pf6N2E2_4142	0.18	+1.1
4,822,564	+		Pf6N2E2_4142	0.38	+1.1
4,822,564	+		Pf6N2E2_4142	0.38	-0.5
4,822,564	+		Pf6N2E2_4142	0.38	-0.5
4,822,565	-		Pf6N2E2_4142	0.38	+0.1
4,822,565	-		Pf6N2E2_4142	0.38	+0.1
4,822,565	-		Pf6N2E2_4142	0.38	+1.1
4,822,565	-		Pf6N2E2_4142	0.38	-1.1
4,822,567	+		Pf6N2E2_4142	0.38	-0.5
4,822,567	+		Pf6N2E2_4142	0.38	-0.2
4,822,567	+		Pf6N2E2_4142	0.38	-0.5
4,822,567	+		Pf6N2E2_4142	0.38	-2.1
4,822,567	+		Pf6N2E2_4142	0.38	-0.5
4,822,567	+		Pf6N2E2_4142	0.38	+0.1
4,822,568	-		Pf6N2E2_4142	0.38	+0.1
4,822,568	-		Pf6N2E2_4142	0.38	-0.8
4,822,568	-		Pf6N2E2_4142	0.38	+0.1
4,822,942	+		Pf6N2E2_4142	0.75	-0.2
4,822,942	+		Pf6N2E2_4142	0.75	-0.4
4,822,942	+		Pf6N2E2_4142	0.75	+0.1
4,822,942	+		Pf6N2E2_4142	0.75	+0.7
4,822,948	+		Pf6N2E2_4142	0.75	+0.1
4,822,948	+		Pf6N2E2_4142	0.75	-1.2
4,822,990	+		Pf6N2E2_4142	0.79	-0.5
4,822,990	+		Pf6N2E2_4142	0.79	+0.1
4,822,990	+		Pf6N2E2_4142	0.79	+1.1
4,822,991	-		Pf6N2E2_4142	0.79	+0.1
4,822,991	-		Pf6N2E2_4142	0.79	+0.1
4,822,991	-		Pf6N2E2_4142	0.79	+1.1
4,822,991	-		Pf6N2E2_4142	0.79	+0.5
4,822,991	-		Pf6N2E2_4142	0.79	-1.2
4,822,991	-		Pf6N2E2_4142	0.79	-0.5
4,823,014	-		Pf6N2E2_4142	0.82	+1.1
4,823,215	+				+0.1
4,823,215	+				-0.2
4,823,215	+				+0.1
4,823,215	+				-1.5
4,823,216	-				-0.9
4,823,216	-				+0.1
4,823,216	-				+1.1
4,823,216	-				-0.9
4,823,216	-				-0.3
4,823,216	-				+1.1
4,823,216	-				+1.1
4,823,216	-				+0.1
4,823,218	+				-0.9
4,823,218	+				-0.5
4,823,218	+				+0.1
4,823,218	+				-0.5
4,823,218	+				+0.1
4,823,218	+				+1.1
4,823,218	+				-0.5
4,823,218	+				+0.6
4,823,218	+				+1.1
4,823,219	-				+1.1
4,823,219	-				+1.1
4,823,219	-				+1.1
4,823,219	-				-0.5
4,823,219	-				+1.1
4,823,219	-				-0.5
4,823,219	-				-0.9
4,823,219	-				+0.1
4,823,222	+				-0.7
4,823,254	+				+0.1
4,823,254	+				-1.0
4,823,254	+				+1.1
4,823,254	+				-0.1
4,823,254	+				-0.5
4,823,254	+				+0.1
4,823,254	+				+1.1
4,823,254	+				+1.1
4,823,254	+				-0.5
4,823,254	+				+1.1
4,823,255	-				+1.1
4,823,255	-				+1.1
4,823,255	-				-1.2
4,823,255	-				+1.1
4,823,255	-				-0.7
4,823,255	-				-1.2
4,823,255	-				+0.8
4,823,349	-				+0.1
4,823,391	-		Pf6N2E2_4143	0.12	-0.5
4,823,552	+		Pf6N2E2_4143	0.26	+1.1
4,823,552	+		Pf6N2E2_4143	0.26	-1.2
4,823,552	+		Pf6N2E2_4143	0.26	+0.1
4,823,552	+		Pf6N2E2_4143	0.26	-0.9
4,823,553	-		Pf6N2E2_4143	0.26	+1.1
4,823,553	-		Pf6N2E2_4143	0.26	+0.1
4,823,553	-		Pf6N2E2_4143	0.26	+1.1
4,823,553	-		Pf6N2E2_4143	0.26	-0.5
4,823,876	-		Pf6N2E2_4143	0.54	-1.5
4,824,154	+		Pf6N2E2_4143	0.78	-2.0
4,824,155	-		Pf6N2E2_4143	0.78	+0.1
4,824,155	-		Pf6N2E2_4143	0.78	+1.1
4,824,505	+		Pf6N2E2_4144	0.13	+1.1
4,824,505	+				+1.1
4,824,505	+		Pf6N2E2_4144	0.13	-0.5
4,824,505	+		Pf6N2E2_4144	0.13	-0.9
4,824,506	-		Pf6N2E2_4144	0.13	+1.1
4,824,506	-		Pf6N2E2_4144	0.13	+1.1
4,824,506	-		Pf6N2E2_4144	0.13	+1.1
4,824,506	-		Pf6N2E2_4144	0.13	+1.1
4,824,506	-		Pf6N2E2_4144	0.13	+0.1
4,824,506	-		Pf6N2E2_4144	0.13	+0.1
4,824,506	-		Pf6N2E2_4144	0.13	+0.1
4,824,506	-		Pf6N2E2_4144	0.13	-1.5
4,824,835	+		Pf6N2E2_4144	0.54	-0.1
4,824,835	+		Pf6N2E2_4144	0.54	-0.6
4,824,835	+		Pf6N2E2_4144	0.54	-0.3
4,824,836	-		Pf6N2E2_4144	0.54	-0.3
4,824,836	-		Pf6N2E2_4144	0.54	+1.1
4,824,836	-		Pf6N2E2_4144	0.54	+1.1
4,825,039	+		Pf6N2E2_4144	0.79	+1.1
4,825,039	+		Pf6N2E2_4144	0.79	+1.1
4,825,039	+		Pf6N2E2_4144	0.79	-0.5
4,825,039	+		Pf6N2E2_4144	0.79	+0.2
4,825,039	+		Pf6N2E2_4144	0.79	+1.1
4,825,040	-		Pf6N2E2_4144	0.80	+1.1
4,825,040	-		Pf6N2E2_4144	0.80	-0.5
4,825,040	-		Pf6N2E2_4144	0.80	-0.3
4,825,040	-		Pf6N2E2_4144	0.80	+1.1
4,825,040	-		Pf6N2E2_4144	0.80	+0.1
4,825,040	-		Pf6N2E2_4144	0.80	-0.4
4,825,040	-		Pf6N2E2_4144	0.80	-0.9
4,825,083	-		Pf6N2E2_4144	0.85	+0.1
4,825,083	-		Pf6N2E2_4144	0.85	-0.4
4,825,141	+				-0.7
4,825,141	+				+0.4
4,825,142	-				+1.1
4,825,142	-				-0.5
4,825,142	-				+1.1
4,825,142	-				-0.0
4,825,142	-				+1.1
4,825,142	-				+1.1
4,825,322	+		Pf6N2E2_4145	0.12	-0.1
4,825,322	+		Pf6N2E2_4145	0.12	-0.5
4,825,380	-		Pf6N2E2_4145	0.19	+1.1