Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3896

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
4,528,929	+		Pf6N2E2_3895	0.64	+1.1
4,528,929	+		Pf6N2E2_3895	0.64	-0.5
4,528,929	+		Pf6N2E2_3895	0.64	+1.1
4,528,930	-		Pf6N2E2_3895	0.64	+1.1
4,528,930	-		Pf6N2E2_3895	0.64	+0.1
4,528,930	-		Pf6N2E2_3895	0.64	+0.1
4,528,930	-		Pf6N2E2_3895	0.64	+0.6
4,529,034	+		Pf6N2E2_3895	0.69	-1.5
4,529,157	+		Pf6N2E2_3895	0.76	+0.1
4,529,175	+		Pf6N2E2_3895	0.77	-0.9
4,529,175	+		Pf6N2E2_3895	0.77	-0.7
4,529,191	+		Pf6N2E2_3895	0.78	-0.5
4,529,191	+		Pf6N2E2_3895	0.78	-0.5
4,529,209	+		Pf6N2E2_3895	0.78	-0.9
4,529,210	-		Pf6N2E2_3895	0.79	+0.1
4,529,377	+		Pf6N2E2_3895	0.87	+0.1
4,529,429	-		Pf6N2E2_3895	0.90	-0.5
4,529,450	+				+1.1
4,529,490	+				+0.1
4,529,490	+				+0.1
4,529,491	-				+1.1
4,529,491	-				+1.1
4,529,719	+				-0.6
4,529,719	+				-0.5
4,529,720	-				-0.4
4,529,720	-				+0.1
4,529,757	-				-0.3
4,529,804	-				-0.4
4,529,818	-				+1.1
4,529,897	-				+1.1
4,529,994	+		Pf6N2E2_3896	0.11	-0.5
4,529,994	+		Pf6N2E2_3896	0.11	-1.2
4,530,037	+		Pf6N2E2_3896	0.15	+1.1
4,530,038	-		Pf6N2E2_3896	0.15	-0.3
4,530,038	-		Pf6N2E2_3896	0.15	-0.5
4,530,038	-		Pf6N2E2_3896	0.15	+0.1
4,530,038	-		Pf6N2E2_3896	0.15	+0.1
4,530,038	-		Pf6N2E2_3896	0.15	-1.2
4,530,038	-		Pf6N2E2_3896	0.15	+0.1
4,530,038	-		Pf6N2E2_3896	0.15	-0.4
4,530,038	-		Pf6N2E2_3896	0.15	+1.1
4,530,038	-		Pf6N2E2_3896	0.15	-1.7
4,530,039	+		Pf6N2E2_3896	0.15	-0.5
4,530,039	+		Pf6N2E2_3896	0.15	-0.5
4,530,039	+		Pf6N2E2_3896	0.15	+0.7
4,530,039	+		Pf6N2E2_3896	0.15	-2.2
4,530,039	+		Pf6N2E2_3896	0.15	+1.1
4,530,040	-		Pf6N2E2_3896	0.16	-1.2
4,530,040	-		Pf6N2E2_3896	0.16	+0.1
4,530,040	-		Pf6N2E2_3896	0.16	+1.1
4,530,040	-		Pf6N2E2_3896	0.16	-0.2
4,530,040	-		Pf6N2E2_3896	0.16	+1.1
4,530,040	-		Pf6N2E2_3896	0.16	+1.1
4,530,040	-		Pf6N2E2_3896	0.16	+1.1
4,530,040	-		Pf6N2E2_3896	0.16	+1.1
4,530,040	-		Pf6N2E2_3896	0.16	+0.1
4,530,040	-		Pf6N2E2_3896	0.16	+0.1
4,530,147	+		Pf6N2E2_3896	0.26	+0.1
4,530,147	+		Pf6N2E2_3896	0.26	+0.1
4,530,208	+		Pf6N2E2_3896	0.31	+1.1
4,530,209	-		Pf6N2E2_3896	0.31	-0.5
4,530,236	+		Pf6N2E2_3896	0.34	-0.5
4,530,236	+		Pf6N2E2_3896	0.34	-0.9
4,530,417	+		Pf6N2E2_3896	0.51	+1.1
4,530,497	+		Pf6N2E2_3896	0.58	-0.5
4,530,624	+		Pf6N2E2_3896	0.70	+1.1
4,530,624	+		Pf6N2E2_3896	0.70	+1.1
4,530,624	+		Pf6N2E2_3896	0.70	-0.9
4,530,624	+		Pf6N2E2_3896	0.70	+1.1
4,530,658	+		Pf6N2E2_3896	0.74	+0.1
4,530,718	-		Pf6N2E2_3896	0.79	+1.1
4,530,855	+				+0.1
4,530,855	+				-0.5
4,530,855	+				-0.4
4,530,855	+				+0.1
4,530,855	+				-0.6
4,530,855	+				+1.1
4,530,856	-				-0.5
4,530,856	-				-0.3
4,530,856	-				+1.1
4,530,856	-				-0.5
4,530,873	+				+0.1
4,530,874	-				+0.1
4,530,874	-				-0.6
4,530,874	-				+0.1
4,530,874	-				+1.1
4,530,936	+				-0.2
4,530,942	-				-0.7
4,530,942	-				+0.1
4,531,011	+				-0.8
4,531,012	-				-1.4
4,531,040	+				-0.5
4,531,041	-				+1.1
4,531,041	-				+1.1
4,531,064	+				-0.3
4,531,065	-				+1.1
4,531,065	-				+1.1
4,531,065	-				-0.1
4,531,065	-				+1.1
4,531,065	-				+0.1
4,531,149	-				+1.1
4,531,158	-				-0.1
4,531,158	-				+1.1
4,531,181	+				+0.1
4,531,181	+				+1.1
4,531,181	+				-0.3
4,531,182	-				+1.1
4,531,182	-				-0.7
4,531,182	-				-0.5
4,531,207	+				-0.4
4,531,207	+				+0.1
4,531,207	+				+0.4
4,531,208	-				-0.5
4,531,208	-				-0.5
4,531,209	+				+1.1
4,531,209	+				-1.5
4,531,209	+				-0.2
4,531,209	+				-0.4
4,531,210	-				+0.1
4,531,210	-				-0.5
4,531,210	-				+0.5
4,531,405	+		Pf6N2E2_3897	0.58	+1.1
4,531,406	-		Pf6N2E2_3897	0.58	+0.1
4,531,406	-		Pf6N2E2_3897	0.58	+0.1
4,531,406	-		Pf6N2E2_3897	0.58	+0.5
4,531,458	+		Pf6N2E2_3897	0.78	-0.0
4,531,458	+		Pf6N2E2_3897	0.78	+0.1
4,531,459	-		Pf6N2E2_3897	0.78	+0.1
4,531,459	-		Pf6N2E2_3897	0.78	-1.3
4,531,459	-		Pf6N2E2_3897	0.78	+1.1
4,531,459	-		Pf6N2E2_3897	0.78	+1.1
4,531,459	-		Pf6N2E2_3897	0.78	-0.7
4,531,515	+				-0.5
4,531,519	+				+1.1
4,531,520	-				-0.5
4,531,529	+				-1.6
4,531,731	+				-0.6
4,531,731	+				+1.1
4,531,731	+				-0.5
4,531,731	+				+1.1
4,531,796	+				+1.1
4,531,861	+				+0.1
4,531,862	-				-0.3