Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3774

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
4,396,920	+				-0.7
4,396,920	+				+1.1
4,396,920	+				+0.1
4,396,920	+				+1.1
4,396,920	+				+0.1
4,396,920	+				-0.5
4,396,921	-				+1.1
4,396,921	-				+1.1
4,396,921	-				+1.1
4,396,921	-				-0.4
4,396,921	-				-0.7
4,396,921	-				+1.1
4,396,921	-				+0.1
4,396,970	-				+1.1
4,397,185	-		Pf6N2E2_3773	0.32	+0.1
4,397,355	+		Pf6N2E2_3773	0.52	-1.3
4,397,356	-		Pf6N2E2_3773	0.52	-0.5
4,397,377	+		Pf6N2E2_3773	0.55	+0.6
4,397,377	+		Pf6N2E2_3773	0.55	+0.3
4,397,377	+		Pf6N2E2_3773	0.55	+0.1
4,397,378	-		Pf6N2E2_3773	0.55	-1.0
4,397,378	-		Pf6N2E2_3773	0.55	+1.1
4,397,378	-		Pf6N2E2_3773	0.55	-1.1
4,397,378	-		Pf6N2E2_3773	0.55	-0.5
4,397,381	+		Pf6N2E2_3773	0.55	-1.3
4,397,381	+		Pf6N2E2_3773	0.55	+0.1
4,397,381	+		Pf6N2E2_3773	0.55	-1.1
4,397,397	+		Pf6N2E2_3773	0.57	+1.1
4,397,397	+		Pf6N2E2_3773	0.57	-0.5
4,397,398	-		Pf6N2E2_3773	0.57	-1.7
4,397,479	-		Pf6N2E2_3773	0.67	+0.1
4,397,820	+				-2.5
4,397,820	+				-0.4
4,397,820	+				+1.1
4,397,820	+				-0.2
4,397,821	-				-0.7
4,397,821	-				+1.1
4,397,821	-				+0.1
4,397,821	-				-0.5
4,397,994	-				-1.3
4,398,143	-		Pf6N2E2_3774	0.16	+0.1
4,398,163	+		Pf6N2E2_3774	0.17	-0.5
4,398,164	-		Pf6N2E2_3774	0.17	+0.1
4,398,515	-		Pf6N2E2_3774	0.38	+1.1
4,398,560	-		Pf6N2E2_3774	0.41	+0.1
4,398,560	-		Pf6N2E2_3774	0.41	+1.1
4,398,562	-		Pf6N2E2_3774	0.41	+0.9
4,398,653	+		Pf6N2E2_3774	0.46	+0.1
4,398,653	+		Pf6N2E2_3774	0.46	-0.3
4,398,654	-		Pf6N2E2_3774	0.46	-0.9
4,398,682	+		Pf6N2E2_3774	0.48	-0.4
4,398,682	+		Pf6N2E2_3774	0.48	+2.1
4,398,683	-		Pf6N2E2_3774	0.48	+0.1
4,398,683	-		Pf6N2E2_3774	0.48	+1.1
4,398,683	-		Pf6N2E2_3774	0.48	+1.1
4,398,683	-		Pf6N2E2_3774	0.48	+1.1
4,398,683	-		Pf6N2E2_3774	0.48	+1.1
4,398,842	-		Pf6N2E2_3774	0.57	-0.9
4,398,842	-		Pf6N2E2_3774	0.57	+1.1
4,398,842	-		Pf6N2E2_3774	0.57	+1.1
4,398,842	-		Pf6N2E2_3774	0.57	-0.9
4,399,009	+		Pf6N2E2_3774	0.67	+0.1
4,399,009	+		Pf6N2E2_3774	0.67	+1.1
4,399,009	+		Pf6N2E2_3774	0.67	+1.1
4,399,024	+		Pf6N2E2_3774	0.68	+1.1
4,399,024	+		Pf6N2E2_3774	0.68	+0.1
4,399,024	+		Pf6N2E2_3774	0.68	+0.1
4,399,024	+		Pf6N2E2_3774	0.68	-0.5
4,399,024	+		Pf6N2E2_3774	0.68	+0.1
4,399,025	-		Pf6N2E2_3774	0.68	+0.1
4,399,025	-		Pf6N2E2_3774	0.68	-0.5
4,399,025	-		Pf6N2E2_3774	0.68	-0.4
4,399,025	-		Pf6N2E2_3774	0.68	+0.1
4,399,025	-		Pf6N2E2_3774	0.68	+0.5
4,399,064	-		Pf6N2E2_3774	0.71	-0.6
4,399,100	-		Pf6N2E2_3774	0.73	-1.4
4,399,176	+		Pf6N2E2_3774	0.77	-1.5
4,399,176	+		Pf6N2E2_3774	0.77	-0.2
4,399,176	+		Pf6N2E2_3774	0.77	-0.2
4,399,176	+		Pf6N2E2_3774	0.77	-2.3
4,399,177	-		Pf6N2E2_3774	0.77	+1.1
4,399,223	+		Pf6N2E2_3774	0.80	+1.1
4,399,223	+		Pf6N2E2_3774	0.80	-0.5
4,399,223	+		Pf6N2E2_3774	0.80	+0.1
4,399,223	+		Pf6N2E2_3774	0.80	+1.1
4,399,223	+		Pf6N2E2_3774	0.80	+1.1
4,399,224	-		Pf6N2E2_3774	0.80	+1.1
4,399,256	-		Pf6N2E2_3774	0.82	+1.1
4,399,256	-		Pf6N2E2_3774	0.82	+1.1
4,399,399	+				+1.1
4,399,402	+				+1.1
4,399,402	+				+0.1
4,399,510	+				-1.3
4,399,511	-				-1.5
4,399,511	-				+0.1
4,399,511	-				-0.9
4,399,511	-				+0.1
4,399,540	+				-1.5
4,399,540	+				+0.1
4,399,540	+				-0.9
4,399,540	+				+0.6
4,399,540	+				+0.2
4,399,540	+				+0.1
4,399,541	-				-0.7
4,399,541	-				-1.3
4,399,541	-				+1.1
4,399,541	-				+1.1
4,399,541	-				+1.1
4,399,541	-				+0.1
4,399,541	-				+0.3
4,399,541	-				+1.1
4,399,541	-				-0.3
4,399,541	-				+1.1
4,399,541	-				-0.8
4,399,541	-				-0.5
4,399,541	-				+0.1
4,399,541	-				-0.0
4,399,607	+				+1.1
4,399,607	+				+0.1
4,399,608	-				+1.1
4,399,736	+		Pf6N2E2_3775	0.19	-0.3
4,399,736	+		Pf6N2E2_3775	0.19	-0.5
4,399,736	+		Pf6N2E2_3775	0.19	+0.1
4,399,736	+		Pf6N2E2_3775	0.19	+0.1
4,399,737	-		Pf6N2E2_3775	0.19	+1.1
4,399,737	-		Pf6N2E2_3775	0.19	+1.1
4,399,737	-		Pf6N2E2_3775	0.19	+1.1
4,399,737	-		Pf6N2E2_3775	0.19	+0.1
4,399,740	-		Pf6N2E2_3775	0.19	-0.5
4,399,893	-		Pf6N2E2_3775	0.44	+0.1
4,400,050	-		Pf6N2E2_3775	0.69	+0.1
4,400,099	+		Pf6N2E2_3775	0.77	-0.5
4,400,100	-		Pf6N2E2_3775	0.77	+0.1
4,400,100	-		Pf6N2E2_3775	0.77	+1.1
4,400,219	+				+1.1
4,400,238	-				-0.5
4,400,417	-				+1.1
4,400,417	-				+0.1
4,400,417	-				-1.5