Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3748

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
4,362,292	-		Pf6N2E2_3746	0.75	+1.1
4,362,292	-		Pf6N2E2_3746	0.75	-0.2
4,362,292	-		Pf6N2E2_3746	0.75	-0.5
4,362,501	+		Pf6N2E2_3746	0.86	+1.1
4,362,501	+		Pf6N2E2_3746	0.86	+1.1
4,362,501	+		Pf6N2E2_3746	0.86	+0.1
4,362,501	+		Pf6N2E2_3746	0.86	+0.1
4,362,502	-		Pf6N2E2_3746	0.86	+0.1
4,362,502	-		Pf6N2E2_3746	0.86	-0.2
4,362,502	-		Pf6N2E2_3746	0.86	+0.7
4,362,735	-				-0.9
4,362,735	-				-0.5
4,362,796	+				-1.3
4,362,796	+				-0.6
4,362,800	+				+1.7
4,362,800	+				+0.1
4,362,800	+				+0.1
4,362,800	+				-0.3
4,362,801	-				-1.0
4,362,801	-				+0.1
4,362,977	+		Pf6N2E2_3747	0.40	-0.2
4,362,978	-		Pf6N2E2_3747	0.40	+1.1
4,363,053	+		Pf6N2E2_3747	0.54	-0.5
4,363,053	+		Pf6N2E2_3747	0.54	-0.9
4,363,053	+		Pf6N2E2_3747	0.54	-0.5
4,363,054	-		Pf6N2E2_3747	0.54	-1.7
4,363,054	-		Pf6N2E2_3747	0.54	-1.0
4,363,230	-		Pf6N2E2_3747	0.88	-1.3
4,363,347	+		Pf6N2E2_3748	0.10	+0.1
4,363,348	-		Pf6N2E2_3748	0.11	+0.7
4,363,433	+		Pf6N2E2_3748	0.26	-0.5
4,363,564	+		Pf6N2E2_3748	0.50	-0.5
4,363,564	+		Pf6N2E2_3748	0.50	-0.5
4,363,564	+		Pf6N2E2_3748	0.50	+0.1
4,363,565	-		Pf6N2E2_3748	0.50	-0.5
4,363,565	-		Pf6N2E2_3748	0.50	+1.1
4,363,750	+		Pf6N2E2_3748	0.84	-0.7
4,363,751	-		Pf6N2E2_3748	0.84	+1.1
4,363,751	-		Pf6N2E2_3748	0.84	-1.9
4,363,773	+		Pf6N2E2_3748	0.88	-0.9
4,363,773	+		Pf6N2E2_3748	0.88	+0.1
4,363,822	+				+1.1
4,363,823	-				+0.1
4,363,904	+				+0.1
4,363,904	+				+0.5
4,363,904	+				-0.1
4,363,904	+				-1.4
4,363,904	+				+1.1
4,363,904	+				-0.5
4,363,905	-				+1.1
4,363,905	-				+1.1
4,363,905	-				+1.1
4,363,973	+				+0.5
4,363,974	-				-1.7
4,364,060	+		Pf6N2E2_3749	0.11	-0.5
4,364,151	+		Pf6N2E2_3749	0.17	+0.1
4,364,151	+		Pf6N2E2_3749	0.17	+0.4
4,364,363	+		Pf6N2E2_3749	0.31	-0.9
4,364,363	+		Pf6N2E2_3749	0.31	+1.1
4,364,364	-		Pf6N2E2_3749	0.31	-0.5
4,364,364	-		Pf6N2E2_3749	0.31	+0.1
4,364,364	-		Pf6N2E2_3749	0.31	+1.1
4,364,364	-		Pf6N2E2_3749	0.31	+1.1
4,364,364	-		Pf6N2E2_3749	0.31	-1.5
4,364,462	+		Pf6N2E2_3749	0.38	+1.1
4,364,463	-		Pf6N2E2_3749	0.38	+0.1
4,364,611	+		Pf6N2E2_3749	0.48	-1.5
4,364,612	-		Pf6N2E2_3749	0.48	+1.1
4,364,619	-		Pf6N2E2_3749	0.49	-0.5
4,364,694	+		Pf6N2E2_3749	0.54	-0.7
4,364,695	-		Pf6N2E2_3749	0.54	+0.1
4,364,695	-		Pf6N2E2_3749	0.54	+1.1
4,364,695	-		Pf6N2E2_3749	0.54	+1.1
4,364,765	+		Pf6N2E2_3749	0.59	-1.0
4,364,765	+		Pf6N2E2_3749	0.59	+1.1
4,364,766	-		Pf6N2E2_3749	0.59	+1.1
4,364,826	+		Pf6N2E2_3749	0.63	+0.1
4,364,826	+		Pf6N2E2_3749	0.63	-0.4
4,364,827	-		Pf6N2E2_3749	0.63	-0.0
4,364,827	-		Pf6N2E2_3749	0.63	-0.2